Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------DAG2                <---------AHL20(2)                --------->AHL20(2)                                                                  -                --------->ATHB51                             >>>>>>>>>>>>>>>>>LFY                   <                <--------ATHB1                            --------->ARR11(3)                <--------                <---------ICU4                           <---------ICU4                    --------->AHL20(2)       --------->MYB46(3)<----------DOF2                 --------->YAB1                --------->AHL20(1)     <-----------GT1  <---------TOE1(3)               --------->WOX13(1)               <---------AHL20(1)     --------->YAB1  <-----------GT1                <<<<<<<<<<WRKY43               <---------ARR11(3) ---------YAB1 <---------ATHB51                     <<<<<<<<<<WRKY26               --------->ARR11(3) ---MYC3       <---------ATHB12                     <<<<<<<<<<WRKY38           ---------->DOF2  ----- -->MYC3       --------->ICU4               <---------AHL20(2)       ----------->GT1--------->CCA1(2)   tgctcattaacaatccaataatttaagctttttgacaaaattgtattttttttggtcaattatctccaatgtggttttaaacaaagatatatattaaata  17178300                                           <---------ARR14(2)                <---------ALFIN1           <-----------ARR10   <-----------GT1                         --------->GLK1(2) --------->CCA1(2)                    <---------YAB1                                  --------->ARR14(2) -------->ARR11(3)                  --------->YAB1        <-----------RAV1(1)         <---------ARR14(2) ---------ARR11(3)     <---------ARR11(3) <---------GLK1(2)                ----------->GT1 -AHL20(2)<---------DAG2            <---------ICU4       <---------TOE2(3)----------->GT1         --- ----->DOF2<----------DOF2         <---------ATHB12 <----------DOF2      <---------TOE2(3) <---------AtLEC2   aagatttacatgccttttccaccttgatattttgcaaatcatgagaatctcttccttttaatgttgccagttatataggttaaaaacatatttgcatttc  17178400                                              ---------->DOF2                                         <----------DOF2                                        <---------ANAC58                                       <-----         <---------AHL20(2)     --------->REM1(1)                                              ------         --------->AHL20(2) --------->At4g35610                                         ----------->GT1      ----------->GT1       <---------At4g35610                                      ---------->DOF2- ------->DOF2   --------->TOE2(3)       <---------ANAC58                      ----------->GT1  ------   aaaaggaatattaaaaaaacttaattgttctgctacattttggctttcaaaagtcatattgtgagtctaaaactattaaactgtaaacaaaggaaaataa  17178500                                                                                        <---------ANAC58                                                                                        <---------bZIP60(2)                                                                                        --------->ANAC55(2)                                                                                        <---------ANAC46                                                                                        <---------ANAC55(2)                                                                                        <---------TGA1a                                                            --------->TOE2(3)           <---------ANAC58                                                          <------ZmHOX2a(2)            <-------TEIL                                                         --------->AGP1  <-----------HVH21   <-------                                                         <---------ARR11(3)            --------->SPL7                                                         --------->ARR14(2)          <---------MYB52(1)      <---------AHL20(2)                                 <---------GLK1(2)          --------->LBD16      --------->AHL20(2)                                 <---------ARR14(2)        <---------HSFB2a(2) ----AHL20(2)                                            --------->ARR11(3)        --------->HSFB2a(2) --->AHL20(2)                                 <---------DAG2--------->TOE1(3)--------->ANAC58<------- ---------->GT1                --------->ICU4 <----------DOF2------>ZmHOX2a(1)    <---------LBD16 --->AHL20(1)    ----------->GT1           <---------ALFIN1------>ZmHOX2a(2) --------->ANAC58<-------   aatagtatttatatgctatatgtaaaatatgaaatgaatagactcacactttttctctagatccttaagttaaactgtcacgcttccggtacgtggctta  17178600                             --------->AtMYB61                            --------->O2                <---------ARR14(2)                <---------ARR11(3)                --------->ARR11(3)                --------->ARR14(2)                <---------GLK1(2)  --------->ANAC46       <---------GLK1(1)    --------->bZIP60(2)       --------->GLK1(1)    --------->TGA1a   <---------At5g28300      --------->ARR14(2)    --------->ZAT2 <-----------HVH21                <---------YAB1      <---------ARR14(2)    --------->ANAC46 --------->MYB52(1)            <-----------GT1     ==========================HOX2a_HOX2a--------->ANAC58         ------------>CBF           -------     <------ZmHOX2a(1)    <---------ALFIN1--------->ANAC46   <---------AHL20(2)             <-------- <------ZmHOX2a(2)      ------>ZmHOX2a(2) --------->ANAC58  --------->AHL20(2)            <---------- --ANAC46     --------->ANAC58     --------->ANAC58         --------->AHL20(1) ------>ZmHOX2a(1) ---- --ANAC58     --------->ANAC58----------->HVH21             <---------AHL20(2)--------->TOE1(3)  ---- --ANAC58     ----------->ARR10    --------->ANAC58         <---------AHL20(1)--------->TOE2(3)------   tcgatcaggaaatgccaagatactgatcccacctcacaagtcacaagtcacggtctccaaaatttatttctcaatattatccttcaaatttgttacgata  17178700                                                                                             <-------                                                             ------>ZmHOX2a(1)          <----------DOF2                                                             =================================bZIP_DOF                                                      --------->ARR14(2)            --------->TGA1a   *TSS                                               <---------ARR14(2)            --------->ANAC55(2) -->ARR14(2)                                     --------->MYB52(1)===========================bZIP_DOF -YAB1                                 --------->ANAC58   ---------->ID1            ===============bZIP_DOF -GT1                               --------->WRKY18(1)--------->SPL7               <---------ANAC55(2) ----->AtLEC2            --------->YAB1--------->ANAC58<-------TEIL<----------DOF2  --------->O2 -------------------->ANAC81       <-----------HVH21 <---------MYB52(1)    --------->LBD16 --------->ATHB12 --->CCA1(2)             <-----------GT1 <---------ARR11(3)  <----------DOF2        <---------O2<----   tgcaaaaaaacaagaagaaggaagttatcacaatatgggtcaagctctcaataccggttcgtcctttctctttctcccccaaaatcacgtctttcattga  17178800                                              <---------ICU4                     --------->YAB1          --------->ICU4                    <---------YAB1        <---------AHL20(2)                   <-----------GT1        --------->AHL20(2)                  --------->YAB1        --------->ANAC55(2)              --------->AHL20(2)        --------->TOE2(3)              <---------AHL20(2)  <---------ANAC46                 --------->DAG2             <---------AHL20(2)   <------MYB46(1)                 ---------->DOF2   ---------->DOF2          --------->YAB1          <------MYB83-------->HAHB4---------->DOF2       --------->ANAC58       --------->TOE2(3) <---------AHL20(2)  <---------ATHB51 --------->DAG2      --------->ANAC58 --WOX13(1)  --------->AHL20(2)  --------->MYB59        --------->ANAC58        --------->ANAC46 -----TOE2(3)<---------AHL20(1)  --------->MYB46(2)     --------->ANAC58 <---------AtMYB61   tgttcacttcattaataaaattatcatttttttgtttggtatacttaattatggaacgaagcaaaaggtaaaggagaggtagacgcgaaagacttggaag  17178900                                                                         --------->ANAC46                                                                 ------>NtERF2                                                           <----------DOF2       <---------RAP2.6(2)                                              ====================HOX2a_HOX2a  <-----------RAV1(1)                                              <------ZmHOX2a(2) <---------RAP2.6(2)                  --------->LBD16   --------->AHL20(2)     ------>ZmHOX2a(1) <----------DOF2    -----   ctatggctgaaaattgctaccgcaaacgcttagaagaaaaaaatgacgatcaagaatggtcctttggcgacttctaccgcattgtggctgaagcagtcga  17179000                          --------->YAB1                         --------->ICU4                    <---------ZAT6                    ----------->GT1                  --------->ANAC55(2)                        <------MYB46(1)                  <---------ANAC46                           ----------->GT1                  <---------ANAC55(2)                        <------MYB83                  <---------ANAC55(1)              <------ZmHOX2a(1)               <---------TOE2(3)           <---------ANAC58                       --------->ICU4     <-----------GT1        <--------      <----------DOF2    <---------YAB1        ---------->DOF2    <---------YAB1  --------->MYB52(1) ------>GT1<---------ANAC58            <---------YAB1  ----------->ARR10          --------->YAB1   gtaaaattcttttacttgttaagtgttataatgaaaccaatatgagtcggaaaggattagatttggttattaaaccattttcaataacgattttctttcg  17179100                                                                                                    -                                                                                                   <-                                                                                                <----                 <---------AHL20(2)           <--------ATHB1                                   ------                --------->AHL20(2)           --------->ICU4                                    ------             <---------AHL20(2) <-------GAMYB<---------ATHB12                                <------NtERF2             --------->AHL20(2)----------->GT1--------->ATHB12                              <--------            <---------AHL20(2) <---------DEAR3(2)            --------->YAB1                 <--------            --------->AHL20(2) <---------MYB46(3)          --------->AHL20(2)               <--------     <----------ID1           <---------RAP2.6(2)         --------->YAB1                    <-------- --DOF2     <---------AHL20(1)<---------DEAR3(1)    <---------TOE2(3)  ---------->DOF2     <---------DEAR3(1)   agtttttgagacaaattatttaatgctcatgggcggtttataagtcaatgatttaagaaataaaaataaacgataaagactcgagccatatagtcggcac  17179200  Previous    Next  AGI:  At2g41200.1    Description:  similar to hypothetical protein MtrDRAFT_AC147961g27v2 [Medicago truncatula] (GB:ABD28332.2); contains domain EF-hand (SSF47473) Range:  from: 17178703    to: 17180209    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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