Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                               <-----                                                                                              <------                                                                                           --------->LBD16                                                                                           --------->HSFB2a(2)                                                                                       ------>ZmHOX2a(2)                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                     <---------ARR14(3)                                                                                     <---------AGP1    <---------ANAC55(2)                                                              --------->ARR14(3)    ----------->RAV1(2)       --------->LBD16                                    =============HOX2a_HOX2a  <-----------GT1           <---------LBD16                                      <------ZmHOX2a(1) ------>AHL20(1)            --------->TOE1(2)                    =======================HOX2a_HOX2a<- -------AHL20(1)            --------->TOE2(2)                    <------ZmHOX2a(2)   <-----------ARR10 ------>AHL20(2)          ------->TEIL                    <-----------TGA1       ==================== -------AHL20(2)  ------>NtERF2             <-------TEIL  <-----------HVH21      ==================== ---YAB1    <----------DOF2----------->RAV1(2)          <------NtERF2 ------->GAMYB----------->ARR10   ttaattacctgaagctttgaggccattgaacctgggaaatgaaaggttcatcgatgtcgtcgtcacgatcaacagcatcaccaggaagatctccgagatc  17177100                                                         <---------ARR11(3)                                                  ------>ZmHOX2a(2)                                                --------->AGP1                                                <---------ARR14(2)                  <---------DEAR3(2)                                                <---------AGP1                      <---------MYB46(3)                                                --------->ARR14(2)                 <---------DEAR3(1)                                                <---------ARR11(3)                 <---------TOE2(2)                                                --------->ARR14(3)              --------->TGA1a                       --------->TOE2(1)        <---------ARR14(3)              <---------TGA1a                       --------->TOE1(1)        --------->ARR11(3)              --------->O2                      --------------->AtSPL3   <---------CCA1(2)           --------->ANAC58           <-----------GT1                   <---------HSFB2a(2)     --------------------->WRI1 ->ZmHOX2a(2)         <---------HSFB2a(2)    --------->HSFB2a(2)   --------->At4g35610 -ZmHOX2a(2)          --------->HSFB2a(2)    --------->HSFC1(1)<-----------TGA1 <---------O2        < ---ARR11(3)<---------At5g28300 <-----------RAV1(1)--------------------->WRI1 --------->MYB52(1) ---- ---------DOF2   <---------ANAC58   <-------GAMYB<------ZmHOX2a(2) <---------At4g35610<---------MYB52(1) ==HOX2a_HOX2a   <---------ANAC58  <-----------RAV1(1) <---------MYB52(1)  --------->ANAC46  <------- =HOX2a_HOX2a <-----------RAV1(1)<---------At4g35610   --------->DOF5.7(2) --------->ANAC58<---------   gctttgatcagtttcactgtcgttctcgtacttactgctgttgtcttctagatcttcgttatcttcgtcatcttcgaacgtaacgtcggtttttttctcc  17177200                                                                                              -------                                                                                              <------                                                                                       <-------------                                                                                       --------------                                                 ================================HOX2a_HOX2a --------                                                 ------>ZmHOX2a(2)            <---------AHL20(2)            ---------->ID1                      =================================HOX2a_HOX2a--------- --------->ATHB12                               <------ZmHOX2a(2)         <------ZmHOX2a(1) --------- --------->YAB1                                <---------ARR11(3)         ----------->GT1  ---------- <---------ICU4                                <---------AGP1      --------->TOE2(3)  <-------------- ---------YAB1                                 --------->AGP1      --------->TOE1(2)  --------------- -->ZmHOX2a(1) ------>ZmHOX2a(1)    --------->ANAC58               --------->TOE1(3)  <-------------- ----GT1<---------ANAC58            --------->ANAC58            <---------ARR11(3)    =============== --GT1  <---------ANAC58    --------->MYB46(3) --------->ARR11(3)------->TEIL--------->AHL20(2)   ttatcattgttcttgtcctccatatttcgaacaaacccaagtaagaatagatctagagagtatcaagaaccttagaggattaaatctcaccgaaaaagga  17177300  ---------->DOF2 ---->GT1            <---------WOX13(1)             <----------DOF2 ----ID1           --------->ATHB12           <---------HSFB2a(2)                     <---------At4g35610 --AGL15          <---------YAB1              --------->HSFB2a(2)                     <---------ZAT2 ->AGL15      <----------DOF2                 <---------HSFC1(1)                      --------->ZAT2 --->GT1   <---------ARR11(1)             <---------PCF2                           ---------->DOF2 >DAG2 <------ZmHOX2a(2)                 <---------DEAR3(2)              ============================ --------------->ANAC81                  <------MYB46(1)                 <-----------------AG >DOF2<---------ARR11(3)                 <------MYB83             <------NtERF2   <------ZmHOX2a(1) ---AGL1   --------->ARR11(3)          --------->ALFIN1       <---------O2  --------->YAB1 -->AGL1  <---------CCA1(2)  <---------MYB46(3)  <---------ARR11(3)  ---------->DOF2  --------->At4g35610 ---AG--------->ARR11(3)    <---------TOE2(3) --------->HSFC1(1)--------->ALFIN1<---------TOE2(3)  -- ==========================================================================================MADS_MADS   aaaaaaaagatcaaatctttatgattgattttggttacagagtgggttcgagaactttgcagagaggtggcaaaagactaataaggaaagctgagtgtct  17177400                                                <---------GLK1(1)                                               --------->ARR14(2)                                               <---------ARR14(2)                                              <------ZmHOX2a(1)                                     <---------------AGL15                                     --------------->AGL15                                     <----------DOF2                                     <---------DAG2         --------->ATHB12                        <---------ATHB12   --------->HSFB2a(2)             <---------MYB52(1)   <-----------GT1          <---------YAB1                  --------->HSFB2a(2) ====================================================MADS_MADS                <---------CCA1(2)     - ------->At4g35610   <---------AHL20(2)    <---------HSFB2a(2)<---------WOX13(1)     *TSS  <---------HSFB2a(2)   gagcacaaaatgtccgtttttttttaatcaagaattttactttttcgaggatttgtgtgatttgattgctcttgttctccgtctctctctgttcgcgaga  17177500                                             <---------YAB1                                         <------NtERF2                                       <---------DREB2C(2)                                       <---------DEAR3(1)                                  --------->TGA1a                                  <---------ANAC58                                  <---------O2                                  --------->O2                                  <---------TGA1a                                  <---------ANAC46                                  <---------bZIP60(1)                                  <---------ANAC55(2)                                  >>>>>>>>>>HY5                                  ======================================bZIP_DOF                                  ======================================bZIP_DOF                                  <---------bZIP60(2)                                  <---------ANAC58                                  --------->bZIP60(1)                                  --------->ANAC55(2)                                 ----------->STF1                               ----------->TGA1                      ----------->GT1  <---------ANAC46                          ------------>CBF                      <------NtERF2   <---------ABI4(1)               ---------->DOF2  <---------WOX13(1) ----------->GT1  <------NtERF2                 <------ZmHOX2a(2) <------------CBF    --------->LBD16--------->ALFIN1               <---------ARR11(3)--------->ICU4 <---------ANAC58   <---------ANAC46----------->HVH21        ---------->DOF2    --------->ANAC58 <---------ANAC58  <---------LBD16<---------ANAC55(1)       ===============HOX2a_HOX2a             <- -------->ATHB12 --------->DAG2----------->HVH21            <------ZmHOX2a(1)   --------->ANAC58<----   gttgattgcccctagttataaggcgggaaaatagtgacgtggcggtgatgatagagactagaggaaagagatcaaagttgagaagcaatgtttttagact  17177600                                                                           --------->ZAT6                                                                          <------ZmHOX2a(2)                                                                       <------NtERF2                                                                      --------->LBD16                                                                     <---------LBD16                                                                    <---------ANAC46                                                                    <---------LBD16                                                                   <---------ZAT2                           <---------MYB46(3)                     <---------ARR14(2)                   <-------GAMYB                                  --------->ARR14(2)                  <---------ANAC46         ------>ZmHOX2a(2)     --------->ATERF1(1)                  <---------ANAC58 --------->ARR11(3)           <---------SPL7                  <---------ANAC58 <---------AHL20(1)          <---------ANAC58       ------>NtERF2       --------->HSFC1(2)                  <---------ANAC58      --------->ANAC46     <---------HSFC1(2)                 ----------------->AGL1      -----------   ------>ZmHOX2a(2)       <---------HSFB2a(1)    <---------TOE1(2)--------->ZAT2       ---------->DOF2 --------YAB1<-----------RAV1(1)   --------->AHL20(1)    --------->ALFIN1 ==============HOX2a_HOX2a ------DOF2  --------->ALFIN1      <---------ARR11(3)    <-----------RAV1(1)     <------ZmHOX2a(1)   tttgatcgacgacaagtgttgcgttgagatggttcgatatattgatccctcgtagggatgtgttgccgtagccgggatcactaggacttggaaagttata  17177700                                                                                            <--------                                                     XXXXXXXXXXXXXXXXXXXX>MIR419---------->DOF2                    <---------AHL20(2)              <---------YAB1             <---------AHL20(2)  <---------HSFB2a(2)    --------->AHL20(2)      --------->AHL20(2)         --------->AHL20(1)  >>>>>>>ZML2      --------->AHL20(2)            <---------AHL20(2)         <---------AHL20(1)  -----  --------->HSFB2a(2)--------->AHL20(2)       --------->ATHB51             --------->AHL20(2)  <----- >GT1 --------->ARR14(2) <---------AHL20(2)   --------->AHL20(2)      <---------TOE2(3)    --------->AHL20(2)   tgttctagtattctccaaaaatttaaaataaatattcaaaacatagaataatttataaatgcctagaatattaagaaatatataaagtttcaatattatg  17177800           <---------ANAC58           <---------ANAC46         <-----------GT1    --------->YAB1   <---------AHL20(1)                                         --------->ARR11(3)  --------->ARR11(3) --------->AHL20(1)                                         <---------ARR11(3)  - -YAB1<---------YAB1--------->AHL20(2)                                         --------->GLK1(1) <--- ------>GT1<---------ANAC58--------->MYB52(1)             --------->YAB1     --------->YAB1---------- ----TOE2(3) ----------->GT1  ----------->GT1     ---------->DOF2           <---------ATHB12     ----   gaaaaatcatgtttcttgtaaaatatataaaacggtttttagcctattgacaaaaagaattcataacgcttagttccaatgatatctattgacaaaagga  17177900                                              <---------ANAC46         <---------GLK1(2)                                              <---------ANAC58         --------->ARR14(2)                                              <---------ANAC58         <---------ARR14(2)                                       <---------AHL20(2)          <---------ANAC58   <-----------GT1                   --------->CCA1(2)             <---------ANAC58        <--------- -------->YAB1                      <---------ARR11(3)        <-----------RAV1(1)         <---------DAG2 ------GLK1(1)                      --------->ARR11(3)       ------->TEIL      <---------At4g35610 >DOF2                 <----------DOF2 --------->AHL20(2) <---------YAB1      <---------TOE1(3) ----->GLK1(1) <----------DOF2    <---------TOE2(3)--------->YAB1  <---------ANAC46    <-----------GT1   attcataacctttctctctttatttctttcacgtttaagatataaatggcgaatgataccatgaatgttgctggattcttaagcttattctacctttttt  17178000  Previous    Next  AGI:  At2g41190.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G39130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63046.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 17174357    to: 17177485    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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