Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <------ZmHOX2a(1)                                         --------->LBD16                                     <---------ARR14(2)                                     --------->ARR14(2)                                    --------->GLK1(1)                               ------>ZmHOX2a(1)                                --------->LBD16                                <---------------------                              <---------LBD16                             <----------DOF2 ---------At4g35610  <---------TOE2(3)  <---------LBD16<------------------------ANAC81 ------->ARR10       <---------TOE1(3)  <-----------RAV1(2)           <---------GLK1(2)        <-----   agagcttctctaatatgcagtctaaggttaagtccggcaaatccaggagagacattttgttttcatcttcttgattctttttcttcctcttcgtttcctt  17167800                                     <---------ANAC58                                     <---------ANAC58                                <---------YAB1                   <---------------AGL15                            <---------GLK1(2)                  --------->DEAR3(2)                         --------->ANAC55(2)    --------->ANAC58 ----------->RAV1(1)                         <---------ANAC55(2)    --------->ANAC58----------------->AGL3        <---------TOE1(3)<---------ANAC46  ------>NtERF2      --------->PCF2        <---------TOE2(3)<---------TOE2(3) --------->ANAC46  --------->ARR14(2) ---ANAC81              <---------LBD16    --------->ANAC58  <---------ARR14(2)                  ---- -----DOF2             --------->MYB52(1)  --------->ANAC58 <------ZmHOX2a(1)           ---------->DOF2   tctccatgttaatgttctaatcccattacggattatgcttcttgccagccaagaaactatgaggaacccacaaatggtgatggagaaacaaaaagaaatg  17167900                                  --------->TOE1(2)                               --------->CCA1(2)                        --------->ANAC58                                                           <-   <---------------AtSPL3    <---------MYB52(2)                                                    <-   --------->MYB59      --------->ANAC58                                                         ----   --------------->AtSPL3   --------->ANAC58                                                   <-----   <---------------AtSPL8   --------->ANAC58                                                 -------- ------>DOF2          ---------->DOF2                             ---------->DOF2          <---------WOX13(1)   aaagtgaggtactgtttctccattgaaagcaagaaacgagggagagaaaacagagtgagattagtggctaaagagagagagagagagagagagattgatt  17168000          --------->ANAC58   --------->ANAC46   <---------RAP2.3(2)   <---------RAP2.6(2)                                            <---------At4g35610  <---------LBD16                                                 --------->At4g35610  --------->RAP2.6(3)                                             --------->ZAT2  <---------At5g28300                                           <------ZmHOX2a(1) <-----------GT1                                   --------->ANAC46                          ------->TEIL --------WOX13(1)                                  --------->ANAC55(1)                  <---------ANAC46 ---------DOF2                                     --------->ANAC58                   <----------DOF2 ----->ATHB12  ----------->GT1   <----------DOF2   <---------ANAC55(2)             --------->ANAC58 ----WOX13(1)---------->DOF2    <---------DAG2     --------->ANAC55(2)             --------->ANAC58 ->ATHB12 --------->ANAC58   <-----------GT1       --------->ANAC58              <-----------GT1   gatttacggctcaagaaaagaaaatttgtttttgcctttttagtcatttacacacgcaattcaagaggagctgtctcatgtagtcacgctttgtgtatgt  17168100                      <-----------GT1                  <---------AHL20(2)                 <---------AHL20(1)                 --------->AHL20(1)                <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2)            --------->AHL20(2)                                                          --------->ZAT6            <---------AHL20(2)                                                   --------->YAB1          --------->AHL20(2)         --------->ANAC58                         --------->YAB1          <---------AHL20(2)         --------->ANAC58                        <---------YAB1  --------        <---------AHL20(2)       --------->ANAC58                           --------->AHL20(2)        --------->AHL20(2)       --------->ANAC58       <---------ARR11(3)  <---------AHL20(2)   gtctgtgtatatatatatatatatttacaagtattaagcaagtaagcttgaagttgaagacattataaacacaaacattttaataagaaaacactaaaag  17168200                                                                                              <------                                                                                             --------                                                                                             --------                                                                                         ------------                                                                                    <---------ANAC46                             <---------TOE2(3)                                      <------MYB83                      <---------TOE2(3)    <-------TEIL                             <---------ANAC58                  <---------ICU4          --------->ARR14(1)                        <------MYB46(1)                 --------->ICU4          --------->ARR11(1)                --------->TOE2(3) <-------                 <---------ATHB12        --------->ARR14(2)             ----------->RAV1(1)  --------                 <---------ATHB51        <---------GLK1(2)            <-------TEIL  <---------ANAC58<               --------->YAB1<---------TOE1(3)            --------->AHL20(2)       <---------MYB46(3) -->DOF2      *TSS--------->YAB1         <---------ARR14(2)<---------AHL20(2)      --------->MYB55(2)   agacatcgaactgtgaacaataatgaggtttagggttttaaaagattcgttgtgaggctatttaatagaaggtgcaacattaagttgggtgagcaataaa  17168300                                                --------->MYB59                                                <------MYB83           <------MYB83                         <---------MYB46(3)          --------->MYB111(1)                   <------MYB46(1)  <---------MYB52(1)                          <--------P ---ICU4  --------->MYB46(2)                 <---------ANAC58 ->ICU4   <---------AtMYB61                  <---------ANAC58 --->TBP  --------->MYB111(2)               --------->ATHB12 >CBF <------ZmHOX2a(1)            --------->YAB1<------MYB83 --ATHB12<--------P     <-------TEIL        <---------MYB46(3) ->AHL20(2)<------MYB46(1)         <---------ICU4<------MYB46(1)     ----------->HVH21<---------HSFC1(2) ---------ZAT6       --------->At4g35610    --------->MYB55(2)     --------->ANAC55(2)--------->HSFC1(2)   tacagttaggagtaggtggaaacagatgcaaaaccactaatgacattggttgggtcataagaagacttcaagtgacaatcccatgagaggcttctagtta  17168400                                         <------NtERF2                                     --------->At4g35610                                     <---------At4g35610                                     ----------->RAV1(2)                                     <---------ZAT2                                     --------->ZAT2                                 --------->MYB52(1)                                ----------->HVH21                              <---------ANAC58                              --------->ANAC55(2)                              <---------ANAC58                            <---------ANAC46   <-------GAMYB                          <---------ANAC46    <---------MYB46(3)      ------>ZmHOX2a(2)                          <---------ANAC58    --------->MYB52(2)  <-------TEIL                          <---------ANAC58<---------ANAC58    <---------TOE1(3)      --------->ZAT6                       ==========================RAV          <---------TOE2(3) --------->YAB1  <----   --------->DAG2      <-----------RAV1(1)<---------ANAC58    --------->MYB59   --------->TOE2(3)  ---------->DOF2<---------TOE2(3) --------->MYB46(3)   <---------GLK1(2)       --------->TOE1(3)   cagagaaagtgaccttatagaggttatgtcgtgcgtaacagctggcgctcgttgcaccgatttttaggttgatccatttcaatcttaaaactactcaaat  17168500                       ---------->DOF2               --------->LBD16                         ------>MYB46(1)               ===================bZIP_DOF          --------->ANAC46                         ------>MYB83               <---------TGA1a                     ------>MYB46(1)                         ------->GAMYB               --------->TGA1a                     ------>MYB83           --------------->AtSPL8               <---------O2                   <-----------GT1      <---------DAG2          --------->AtMYB61         <-----------ARR10                 <---------ICU4          <----------DOF2         <---------MYB59        <---------CCA1(2)               --------->YAB1   <---------MYB111(1)              --------->MYB46(3) -----ATHB12   --------->O2             ----------->GT1  --------->MYB46(3)      <---------MYB59   caacaaaatcaaatctcacttgaggcaaagaatgtattgaaatcgtaattacctccccaactactctctctttttgtccgtagcctaattcaaccaaact  17168600                                                                       --------->GLK1(2)                                                           ------->TEIL--------->ARR11(3)           -                                                           --------->ARR14(2)                       -                           --------->ICU4                  <---------ARR14(2)                       -                 --------->YAB1                   --------->ATHB12    --------->YAB1          -------        --------------->AtSPL8<---------YAB1  ----------->GT1      --------->YAB1             <------       <----------DOF2   ---------->DOF2      <------MYB46(1)   --------->ANAC46              <------   <---------MYB111(1)--------->TOE2(3)       <------MYB83 <-----------GT1           ---------->DOF2-   <---------MYB111(2)<----------DOF2   ---------->DOF2<---------TOE2(3)     ---------->DOF2 <-------   ttccaactactttgtacaaaaatactttaaagattatagaacaaaagttggtttattgatgtatccacataataatcttgaaagtcttaaagccaaaatc  17168700  Previous    Next  AGI:  At2g41170.1    Description:  F-box family protein. Identical to F-box protein At2g41170 [Arabidopsis Thaliana] (GB:Q6NKN8;GB:O80670;GB:Q56WJ1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G26850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67265.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 17166182    to: 17168214    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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