Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                              <------                            ------->TEIL                                                   --------->ARR11(3)                          <---------ZAT18                                                  --------->GLK1(2)                      --------->MYB52(2)                               --------->DAG2--------->ANAC58                   <---------SPL7<---------HSFB2a(2)                  ---------->DOF2--------->ANAC58 ---------YAB1    <---------HSFB2a(1)         <---------TOE2(3)     <---------AHL20(2)     <---------ARR11(3) ------WOX13(1)   --------->HSFB2a(1)       <---------AHL20(2)  <---------ZAT6     ---------->DOF2 -- ---YAB1        <------ZmHOX2a(1)--------->HSFB2a(2)          ----------->GT1 ----------->GT1 -------   ttgttattgcagaaacaaggacgttcgatgcacttccaaaaaacatataatgttacagacaatgtagtattaaaaagtagtagttaaaagcaaaatcttt  17147000                                   ------>MYB83 ---------ICU4                     --------->AtLEC2 -------->ATHB51               -------->P --------ATHB1            <---------ALFIN1 ---------AHL20(2)    --------->ZAT2 -------->AHL20(2)    --------->At4g35610                            <---------AHL20(2) ----->YAB1           <---------ZAT2   --------->MYB52(1)           --------->AHL20(2) ----DOF2             <---------At4g35610                        <---------YAB1 ------->ICU4    ----------->HVH21 ------>MYB46(1)         <---------YAB1                          <- -->TOE2(3) <---------REM1(1)<---------MYB111(1)         --------->YAB1               ---------->DOF2   aataatttagacaaatgtagcgacagctccacttaccatccaaacgaatacttcacaattgataattctaataaatgtttttttttaaaaaagacagcat  17147100                                                     --------->ANAC58                                                     --------->ANAC58                                                   --------->TOE1(2)                                                  --------->MYB46(3)                                                 ------->TEIL                                               ------->GAMYB                                              <---------MYB52(2)                                              <---------MYB55(2)                                              --------->MYB46(3)                               <-----                                             ------>MYB83                                      ------       <----------ID1                        ------>MYB46(1)           ------>NtERF2           <-----     --------->MYB52(1)                     --------->MYB52(1)       <------NtERF2            <------     --------->YAB1                        --------->TOE2(2)         --------->ATERF1(1) --------->DAG2  --------->YAB1                           --------->TOE1(2)        <---------ATERF1(1) --------->DAG2 --------->ZAT6         <---------TOE2(3) <---------MYB52(2)       <---------DEAR3(1)  ---------->DOF2 ----------GT1         --------->MYB52(1) --------->MYB46(3)  ---------->DOF2    ---------->DOF2   ttaacaataacgagaaaacaaatactaacgaattggaaccagaaaccaacgaaccaaggaaaatcaaaggaggcgactcactggaaaggaaaaggtgaga  17147200             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->ARR14(2)           <---------ARR14(2)          ------->GAMYB           --------->TOE1(2)         --------->MYB46(3)       <-------MYC2       <---------DOF5.7(2)        ------->MYC2      <---------WRKY45            ------->MYC3      <---------WRKY38(1)    ----------->HVH21      <---------WRKY12     <---------ANAC46 ---------->DOF2      --------->ARR14(2) ------>ZmHOX2a(2) ----At4g35610   --------->REM1(2)<-------MYC3                      <----------DOF2 --->At4g35610 --------->LBD16  ------->TEIL<---------CCA1(2)    <---------ANAC46 ----bZIP60(2)<---------ANAC46 <---------DOF5.7(2)          ----------->RAV1(2)        <---------AHL20(2) -----------------TaNAC69(2) --------->DOF5.7(2)           -------->P     --------->AHL20(2)       --   tggcaaagtcaacgatccgcgtagaaaccgcgtgaacgtgtgatccatctcttctcatgtcaacctggcgcttaaatttaaaactcaaatttatggcatt  17147300                                        --------->YAB1                                       --------->ZAT6                                      ------------>CBF                                      <---------TOE2(3)                               ============================RAV                               ------>NtERF2                                             ------->TEIL                               ----------->RAV1(1)                                       <---------ARR14(2)                              --------->LBD16               --------->ANAC58             --------->ARR14(2)                              --------->ANAC46              --------->ANAC58          --------->ANAC58                              <---------ETT(1) <-----------RAV1(2)                 <---------ZAT18                             <---------HSFB2a(2) ----------->GT1        --------->LBD16  *TSS               --------->MYB52(1)    --------->YAB1     ---------->DOF2 <------NtERF2 --------->ANAC46            --------->LBD16  --------->HSFB2a(2)--------->LBD16       <---------LBD16 --------->ANAC58 ------->ANAC55(2)        ------>ZmHOX2a(1)--------->YAB1   --------->ANAC46       --------->ZAT18   ctcgtaatttcatccccaaaccgaggtccttcccgacattaacaataatccaggtaaataaaacgcctcaagtccgcattcgtagcacacgaatcgtctc  17147400                                                                                  ------>ZmHOX2a(2)                                                                                 --------->GLK1(1)                                                                  ----------->HVH21          --------                                                                <---------At4g35610          --------                                                                --------->ZAT2   <---------GLK1(1)                                                                --------->At4g35610     --------->GLK1(1)                                                             <------ZmHOX2a(2)   <------ZmHOX2a(2)                                                            --------->ARR14(2)  <---------ARR11(3)                  <---------DAG2                            <---------ARR14(2)  <---------ARR14(2)                  <----------DOF2                           <-----------ARR10   --------->AGP1              ---------->ID1               ----------->GT1 <------NtERF2        <---------AGP1              <-----------GT1       ---------->DOF2      <---------ANAC58       --------->ARR14(2)             <-----------GT1  --------->YAB1             <---------ANAC58       --------->ARR11(3)        <---------ANAC58     <---------ATHB12            <---------ANAC46      <---------CCA1(2)        <---------ANAC58   --------->WOX13(1)    <<<<<<<<<<<<<<<<<LFY          --------->At4g35610     <----------DOF2   <-----------GT1   ---------->DOF2<---------LBD16     <------ZmHOX2a(2)--------   acaaactctttcgtttttccctttttctccaatcacagaaaagaaaagaaaaaacaatggcggatcagctcacagacgatcagatctcagaattcaagga  17147500                                                                 --------->ARR11(3)                      <------MYB46(1)                            <---------ARR11(3)                      <------MYB83                              <------MYB83     <---------At4g35610                                 --------->YAB1     --------->At4g35610                                <---------YAB1       <---------YAB1         - ->ANAC46        --------->ANAC58             <----------DOF2   <------MYB46(1)                   <-- ->ANAC58        --------->ANAC58         ------>ZmHOX2a(1)    <---------TOE1(2)                  <-- ->ANAC58   xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------DAG2    <---------TOE2(2)   <---------YAB1<---   agccttcagcttattcgacaaggatggtgatggtatgcttcatcctccctttccctctatcatcgtaggtcttggccgtataattctgatttagtttctg  17147600                                             ------>ZmHOX2a(2)                                             <-------TEIL                                             ======================HOX2a_HOX2a                                            <------ZmHOX2a(2)                                            =======================HOX2a_HOX2a                                           --------->ARR14(2)                                           <---------ARR14(2)                                        --------->ANAC55(2)                                     ----------->HVH21                                     ----------->TGA1                                             <--            <----------DOF2       --------->ALFIN1                                                ---           <---------DAG2       <---------ANAC58                  --------->WRKY38(1)             ---     <------MYB83               <---------ANAC58        --------->ARR14(2)                       ----     <------MYB46(1)            <---------ANAC46        <-----------ARR10                        <--- -------->ATHB12              <---------At5g28300       <---------ARR11(1)                     <----- --------DOF2          ------->TEIL--------->REM1(2)   <---------CCA1(2)<----------DOF2        ------ -------WOX13(1)    --------->ANAC55(2) <---------ANAC55(2) ------>ZmHOX2a(1)                 <------ --------------AGL3 <---------ANAC55(2) <---------ANAC46<---------ARR14(2) ---------->ID1     -------   cttgatttggttcccttttgatatgtatcgattaccgtggtgacggatccattgttcgtatcctcgcattgactcttttcgttttcgatgttccaaatca  17147700                                           ------>ZmHOX2a(2) -------ICU4                              --------->CCA1(2) ------>ATHB12                            <------ZmHOX2a(2)                                  -------- ------>ATHB51                           --------->ARR11(3)                                  <------- ----->ICU4                              --------->AGP1                                    --------->YAB1 ------YAB1              <----------DOF2 <---------AGP1                                   <---------ZAT6 ----ICU4            ---------->ID1      <---------ARR11(3)                         <---------ZAT6 --->YAB1   --------->ARR14(2)       ---------->DOF2                              <---------ANAC46 ---ATHB12  <---------ARR14(2)      <---------AHL20(2)                           <---------AtMYB61 -->ICU4 <---------TOE2(3)          --------->AHL20(2)                           --------->ALFIN1<---   ttattgaattcaaggatttgtttgtgcctttgttcaaattaaagatctatgtagttcggatgaaatatttgtgaatcagccctgtggtgttagtgatgat  17147800                                                   <---------ARR14(2)                       <------MYB46(1)                                 --------->ATHB12  --------->ARR14(2)    <---------ATHB12   <-------- ->ICU4                     <---------AHL20(2) <---------LBD16          ------>MYB83        <------MYB83 --YAB1                     <---------YAB1  <---------GLK1(2)      --------->ZAT6   <----------DOF2 ----TEIL          <-----------GT1        <---------YAB1<---------AtLEC2------>MYB46(1)    <---------AtMYB61   tcatgttttcaattcgtattttgaccagtttttattgatttgttctgattctggatttgcatcgtagtaacaccaatctttgattactttgtgtaggttg  17147900  Previous    Next  AGI:  At2g41110.1    Description:  CAM2 (CALMODULIN-2); calcium ion binding. Identical to Calmodulin-2/3/5 (CAM5) [Arabidopsis Thaliana] (GB:P25069); similar to CAM3 (CALMODULIN 3), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G56800.1); similar to CAM5 (CALMODULIN 5), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to CAM5 (CALMODULIN 5), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.1); similar to calmodulin 4 [Daucus carota] (GB:AAQ63461.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 17147389    to: 17148509    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version