Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------WRKY18(1)                   <---------ARR14(2)               ----------->HVH21                      --------->ARR11(1)        <---------TGA1a               --------->CCA1(2)        <---------ANAC58              --------->GLK1(1)                                        ------        <---------ANAC46              <---------GLK1(1)                                <---------ARR11(3)        <---------ANAC58<---------WRKY38(1)           <---------GLK1(2)                --------->ARR11(3)     ----------->HVH21  <---------WRKY12              --------->ARR14(2)               --------->GLK1(2) <---------GLK1(1)      <---------WRKY45            ----------->ARR10                  <-----------ARR10 <---------At4g35610   --------->WRKY18(1)   --------->ZAT14                      <-------TEIL------- ------>AGL3   --------->WRKY12      <---------ARR11(3)                          --------->CCA1(2) -------AGL3   --------->WRKY38(1)   --------->ARR11(3)                   ---------->DOF2     <------   tggagctctgacttgtgttgacctggtcaacaaaactcagatatcagtggagactagatttggactagagctatggaaaagagatacaaaatctatccag  17094000                                                     --------->At4g35610                                                   <-----------RAV1(2)                                                  <------ZmHOX2a(2)                                       <---------ZAT14                                       --------->ZAT14                                      ----------->RAV1(1)   ----------->GT1                                     --------->ANAC46<---------At4g35610         --------->WOX13(1)                                   --------->ZAT6<-----------HVH21             <---------ATHB12     ------->TEIL           =============================HOX2a_HOX2a      <---------ZAT6            - --->LBD16                  =========================HOX2a_HOX2a        ----------->GT1             - -->HSFB2a(2)               ------>ZmHOX2a(1) <------ZmHOX2a(2)     <---------TOE2(3)               < ---HSFB2a(2)       <---------WOX13(1)=========================RAV ---------->DOF2  --------->YAB1---   aaaattgaatctacaaaatgagattgattcctcgataacacaacacagatcgatcagatgaaatgttactaaagtagtgaaatcaatcttcatcgataga  17094100                                                                                <------NtERF2                                                                               --------->LBD16                                                                              --------->ALFIN1                                                                              <---------DEAR3(1)                                                                             <---------LBD16                                                                             <------NtERF2                                                                             --------->ATERF1(1)                                                                            ------>NtERF2                                                                            <---------RAP2.3(1)                                                                            <---------RRTF1(1)                                                                            <---------ERF1                                                                           <---------DREB2C(2)                                                                           <---------DEAR3(1)                                                                           <---------RRTF1(3)         --------->At4g35610                                               <---------RAP2.6(2)       --------->YAB1                        <------NtERF2                 <---------RRTF1(2)      <------ZmHOX2a(2)                      --------->ZAT18               <---------RAP2.3(3)  ------>ZmHOX2a(2)                        --------->ANAC46                <---------RAP2.3(2) --------->CCA1(2)                         --------->ANAC58              --------->MYB52(1) <------ZmHOX2a(2)                         --------->ANAC58             ----------->HVH21    <------- --------->ARR14(1)                       --------->RAP2.6(3)           ----------->TGA1     <------- -------->ARR14(2)                      ----------->HVH21             --------->YAB1       <---------MYB46(3) -------->AGP1                         --------->LBD16            <------ZmHOX2a(1)       <---------AtMYB61 ---------ARR14(2)         ------------>MYB.PH3(2)     <---------HSFB2a(2)--------->RAP2.6(3)<------- -------->ARR10  --------->AHL20(2)   --------->LBD16 <---------LBD16<-------TEIL      <---------AtMYB61   tagatccgatcagaagagaataaatagaaagtttgttatcccgagacggcacagtacctggaagagaaggattcatgacggcggagctattggtggtgtg  17094200                    <---------YAB1                    ----------->GT1                  --------->YAB1                  <---------ICU4                                                              -------                  -------->HAHB4                          ------>ZmHOX2a(2)            --------->GLK1(2)        <----------DOF2       ---------->DOF2      --------->ATHB12                    <-----------ARR10    <---------CCA1(2)     ---------->DOF2         ===============HOX2a_HOX2a           <---------ARR14(2) --ANAC46        <---------ATHB12                 ------>ZmHOX2a(1)                    --------->ARR14(2) --ANAC58        --------->ICU4                   <---------YAB1<-------GAMYB   --------->CCA1(2) --ANAC58        <---------YAB1          <-------TEIL<---------WOX13(1)------->TEIL--------->YAB1----   agcctcatagctttgggtaatgatgaaaaaaagaaagttcaagttcgtcttcctgattgatccgagcgttatgaacttgaagaaatgagaatccaagcgt  17094300                                                                           *TSS                                                                         ------->MYC2                                                                         <-------MYC2                                                                         ------->MYC3                                                                         <-------MYC3                                                                        --------->O2                                                                        <---------O2                                                                        --------->TGA1a                                                                        <---------TGA1a                               ---------->DOF2                          --------->ANAC55(2)                      <---------ATHB12                   =========================bZIP_DOF        <-- -->YAB1---------->DOF2    ----------->GT1     <---------AHL20(2)       <---------ANAC55(2)       --- ----->MYB52(1)   --------->MYB46(3)      <---------YAB1 ---------->DOF2<---------ANAC46    <--------   aacagtgtgataaagaagaaaccaatgagaggtaaaagtttttgatgattttttttttgcaaagagggaagttcacgtgttataggcctacttgttacat  17094400          <---------AHL20(2)          <---------YAB1         <---------AHL20(1)                                   <-----------RAV1(2)      --------->AHL20(2)                                   <---------ZAT2      --------->YAB1                                       --------->At4g35610   --------->YAB1                                          <---------At4g35610  <---------AHL20(2)          ------------>CBF             --------->ZAT2 -------AHL20(2)      <----------DOF2   ---------->DOF2  <---------ZAT18 ------->TEIL --------->AtLEC2 ------>AHL20(2)--------->At4g35610--------->AHL20(2)    --------->ZAT18 --------->GLK1(2) ---GT1--------->AHL20(1)   ----------->HVH21       ---------->DOF2<-------TEIL    <-------TEIL   ttaaataataatattattagctctctttttctgacaatgaaataaagaaattttaaaagtgagctcaggttcatgaatctgagggttcatgctaatccaa  17094500                                                <---------At4g35610                                              --------->ZAT18                                              <---------ZAT18                     ==============================bZIP_DOF                     ---------->DOF2         <---------ANAC46                <-----------RAV1(2)          <---------ANAC58         --------->ETT(2)                <---------TGA1a         <---------ETT(2)                <---------O2 <---------ARR14(2)         --------->WRKY38(1)             --------->O2 --------->ARR14(2)     ------>NtERF2         --------->DEAR3(1)              --------->TGA1a   ----------->RAV1(2)         --------->WRKY12            <-----------HVH21<---------GLK1(2)   ------>NtERF2       --------->LBD16         <<<<<<<<<TBF1 <---------ANAC58------>ZmHOX2a(1)   ttctctctccgtcgaccttcaggtaaagacttcttcttctgtcacttgtgtgctcatattctcctgctatcaccgatgcccccttggctcaaaccatgga  17094600              <----------DOF2              <---------DAG2    --------->MYB52(1)            <---------At4g35610                            ------->TEIL   ------->GAMYB                  --------->At4g35610                 <----------DOF2  <---------MYB52(2)         <---------GLK1(1)                 <---------WRKY12<<<<<<<<<EIN3  <---------MYB46(2)         --------->GLK1(1)                 <---------WRKY38(1)   atcaactaactgatcacttttgtctacttggatttcagcttctattgtagaatgacattttttggtcatcgacttttgcaatgtatatgagaggtttgat  17094700                                                                  ----------->GT1                                                                 <---------HSFB2a(2)                                                             --------->REM1(1)                                                           --------------->AGL15                                                           <---------------AGL15             --------                                                          <-----------------AGL2   --------->MYB52(1)                           ----------->GT1  <---------At5g28300  --------->HSFB2a(2)  ------->GAMYB <                           xxxxxxxxxxxxxxxx>smallRNA(s)   <-----------------AGL1  <---------WRKY38(1)                        ---------->DOF2--------->DAG2  --------->ARR14(2)         <---------WRKY12  -                      <---------YAB1  ---------->DOF2  <---------ARR14(2)      --------->LBD16     <-        <---------TOE1(3) <---------------AtSPL8       <---------GLK1(2)    --------->MYB52(1)   <---        <---------TOE2(3) --------->DAG2   <-----------GT1<-----------------AGL3 --------->SPL7  <---   aaaactttctaaggctatgagtttataaaaggtaaaaaaaaaaagttacagcattcggattctacatctggaaacaaaaaccggacaacggtattagcta  17094800      <---------ANAC55(2)      <---------ANAC58      --------->ANAC55(2)      <---------ANAC46      <---------ANAC55(1)      <---------ANAC58                                             --------->At4g35610    <-----------GT1                                                <---------At4g35610 ->At4g35610                                                   <---------ARR14(2) ---------ARR11(3)                <----------DOF2              --------->ARR14(2) -------->ARR11(3)           <---------AHL20(2)                <---------ARR11(3) -----ZmHOX2a(1)            --------->ICU4                     --------->ARR11(3) ------TOE1(3)          <---------MYB52(1)         <---------ARR14(2)                  ------>ZmHOX2a(1) ------TOE2(3)         ----------->GT1      ---------->DOF2  ----------->ARR10       --------->YAB1   aggatattacgtgataccagagagcaggtatttattcttttacatacaaagcctatatgagagaagacctgctgatatatgtttcaatcctcatatgtct  17094900  Previous    Next  AGI:  At2g40940.1    Description:  ERS1 (ETHYLENE RESPONSE SENSOR 1); receptor. similar to ETR1 (ETHYLENE RESPONSE 1), two-component response regulator [Arabidopsis thaliana] (TAIR:AT1G66340.1); similar to ethylene receptor [Carica papaya] (GB:AAG41977.1); similar to ERS-like ethylene receptor [Pisum sativum] (GB:AAB94773.1); similar to ethylene response sensor [Brassica oleracea] (GB:AAC31157.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain Histidine kinase, homodimeric; (InterPro:IPR009082); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase A, N-terminal; (Int Range:  from: 17091434    to: 17094375    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g40950.1    Description:  BZIP17; DNA binding / transcription activator/ transcription factor. similar to BZIP49, DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56660.1); similar to cAMP response element binding (CREB) protein [Medicago truncatula] (GB:ABN09189.1); contains InterPro domain cAMP response element binding (CREB) protein; (InterPro:IPR001630); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 17094698    to: 17097502    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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