Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------YAB1                                                                --------->TOE2(3)                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                             --------->GLK1(1)                                                             <---------CCA1(1)                                                             --------->CCA1(1)               <---------AHL20(2)                            <---------RVE1(1)          ------>MYB83                               --------->AHL20(2)          ------>MYB46(1)                       <-------TEIL <---------GLK1(1)            -----------     <---------WRKY18(1)                       <--------P    --------->RVE1(1)   <---------AHL20(2)    --------->WRKY45                         ----------->GT1<---------ARR11(3) <---------RVE1(1)    --------->WRKY38(1)                     --------->DAG2  --------->ARR11(3)--------->ARR11(3)    --------->WRKY12                  <---------WOX13(1)---------->DOF2       <---------ARR11(3) ---->CBF----------->RAV1(1)       --------->ICU4    <---------AHL20(2)       <---------GLK1(2)  <---   tttttgttgaccaacattttttttttttgctcttgcactaattgaaaaggttgatttaaaaagatatcttaaaattgttagatttttttttttttgtaac  17089700                                                                         --------->AHL20(1)                                                                         <---------AHL20(1)                                                                         --------->AHL20(2)                                                                 ----------->GT1                                                                 <---------YAB1                                                               -------->HAHB4                                                               <---------ICU4                                            ---------->DOF2    --------->YAB1                                          <------MYB46(1)     <---------ATHB51    <---------ANAC58                                          <------MYB83      --------->YAB1        ----------->GT1                                        <--------P         ==========================================                                <<<<<<<<<<<<<<<<<LFY       --------------->AGL15  <---------ANAC58                            --------->TOE1(3) --------->ANAC58<---------ATHB12    <---------ANAC55(2)                            --------->TOE2(3) --------->ANAC58--------->ICU4<---------YAB1 ---->AtSPL8             ------->TEIL --------->ATHB12     <---------------AGL15  <---------ANAC46 <- -------DOF2        --------->CCA1(2) <---------MYB46(3)<-----------GT1  <---------AHL20(2)<---------TOE2(3)   ttttattttctcaaattgttagatatgaaactttaaacaatggttggaaagaaacattttactaataatgaaaaatttattaatgcgtaaattgatgttt  17089800                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                    <---------ATHB12                                                       --------->ARR14(2)           --------->AHL20(2)                                                       <---------ARR14(2)  <---------HSFC1(1)               <-----------GT1                     <-------MYC3            --------->HSFC1(1)          --------->AHL20(2)                       ------->MYC3            <---------HSFB2a(2)          <---------AHL20(2)                  ========================================MADS_MADS       --------->AHL20(1)                     <---------------AGL15        --------->HSFB2a(2)       <---------AHL20(1)                    <-----------------AGL1       <---------LBD16--------->AHL20(2)    --------->AHL20(2)                       --------->ANAC46       <-----------------AGL3 =============================================================MADS_MADS  ----------->RAV1(2)   ------ --------TOE2(3)      <---------YAB1       <-----------GT1     <---------CCA1(2)--------->MYB46(3)   tgagattaatatataaataacatgttgataagaggcctggtcaatttactcaacgtggaaactccatctctcttcttctggaaccaataaataaaataaa  17089900                ------->TEIL                             <-----------RAV1(2)                 <-------               <---------CCA1(2)                      <---------At4g35610                   <--------      <----------DOF2                                 --------->At4g35610             ------->TEIL   --------->ARR11(3)                              --------->WRKY38(1)                <---------ARR14(2)   <---------ARR11(3)         --------->ZAT18      --------->WRKY12                   --------->ARR14(2)  <---------At4g35610         <---------ZAT18     <---------MYB52(1)    <-----------GT1<---------At4g35610 ---->DOF2 <---------ANAC46---------->DOF2       <-------GAMYB---------->DOF2        <---------CCA1(2)   agtaagctctttctcgtgaatctctgagttaatgcgctaaactaatctctccgttgagctcaggtaaagagttgtttctattcacatgtatctgattatt  17090000                         <-----------GT1                        <---------CCA1(2)                                      <---------At4g35610                <-----------GT1                                   ------>ZmHOX2a(1)               --------->ZAT14                                    <----------DOF2    <---------TOE1(2)<----------DOF2                           <------ZmHOX2a(2) --ICU4    <---------TOE1(3)                         *TSS     --------->ARR14(2)              <------ -YAB1     <---------TOE2(3)        <---------At4g35610       <---------ARR14(2)            <--------   tcttcttgggtttaaagtttactcttttatctcgttttcgctgattcgtcttgttctctcttccgatcctttttttgtctctgcttcttgctctgttcgt  17090100                                                   --------->ICU4                                              <---------REM1(1)                                            <-------GAMYB                                      <---------At4g35610    --------->ANAC55(2)    <---------DAG2--------->At4g35610                                        <  <---------AHL20(2)       <----------DOF2 <-----------RAV1(1)                                      < ---MYB46(3)              <---------DAG2 <---------At4g35610                            <-------TEIL< -MYB52(1)       <---------At4g35610  --------->At4g35610         <-------TEIL      <---------TOE2(3)   tcatttacttatcttctccatctcactacctttttgatttagctgctgttgtagtaattgtatatatgttcattttgatgcaattcaaggtacagatgtg  17090200                                                                                                  ---                                                                                                <----                                                                                                <----                                                                        <------ZmHOX2a(1)       -----                                                                      <---------TOE2(3)         <----                                       ------>ZmHOX2a(1)       --------->YAB1                   <---- ---------ANAC46                ---------->DOF2               --------->At4g35610               <---- ---------ANAC58          --------->At5g28300                 <---------At4g35610       ----------->GT1 ---------ANAC58         ----------->GT1               <---------MYB46(3)   ---------->DOF2     <----   tttcttggtgtcaattttcaggctctgtggtaaataaagtcctgttcttgatattggtggtttcatcagaattaggatgaaagagaagaagggtcattac  17090300                                                                   <---------HSFB2a(2)                                                                  <---------LBD16                                                                --------->ARR14(2)    <---------ALFIN1                                            --------->GLK1(2)  ------>NtERF2                                                 <---------ARR14(2) ------>ANAC46                                               <---------------AGL15 -----ANAC55(1)                           --------->ZAT14    --------------->AGL15 -----ANAC58                              <---------ZAT14   ----------------->AGL2 ---->ANAC55(2)                    <---------YAB1           <-----------------AGL1                  < -----ANAC46                   <---------GLK1(2)            ----------------->AGL1   ---------->DOF2- -----ANAC58                  <---------At4g35610       <---------ALFIN1           --------->HSFB2a(2) -----ANAC55(2)               --------->At4g35610    --------->AtMYB61             <---------HSFB2a(2) -----bZIP60(2)           <-----------HVH21         --------->ZAT18--------->HSFB2a(2)       --------   gtgccaccatcttatattccattaacacagtcagatgctgatactgaagtagagaccactactccaaatctggaaattgctgtttctgaaagcacaaaag  17090400                 ----------->RAV1(2)                 <---------At4g35610                 --------->At4g35610             <-----------HVH21    <---------ANAC58    --------->LBD16     <----------TaMYB80         --------->At4g35610  ------>ZmHOX2a(2)    <---------ARR14(2)  --------->CCA1(2)                                        - ---------ARR14(2)     ---------->TaMYB80 --------->ARR14(2)               --------->AtLEC2         - -------->ARR14(2)     --------->ARR14(2) <---------ARR14(2)    --------->ZAT14  --------->HSFB2a(1)- -->DOF2    --------->YAB1        <---------ANAC58 <---------At4g35610 <-----------HVH21     <-------   atgatccgagacaatggtcatctggtatatgcgcttgcttcgacgatatgcagagctgtatgctactactctctgtcatccaaaccttcttcattttact  17090500                                                                                                  <--                                      ----------->GT1                                       <--------                                  <---------WRKY18(1)                            --------->YAB1   <--                                 ----------->HVH21                            ---------->DOF2  <----- -------->ANAC46                 --------->WRKY38(1)                      <-------TEIL      --------- -------->ANAC58                 --------->WRKY12                    --------->CCA1(2)    <---------MYB46(3) -------->ANAC58          <----------DOF2           <-------MYC3    --------->ARR14(2)   --------->ALFIN1 ----GT1       ---------->DOF2<---------AtLEC2      ------->MYC3    <---------ARR14(2) --------->ALFIN1   acacgaatcaaatttgttaaaggtgcctctttgcattgacctgtgaaattgccatgtgttagtgtgttcagatatgttcataaagataagtgtggttctg  17090600  Previous    Next  AGI:  At2g40935.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70759.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) Range:  from: 17090053    to: 17091425    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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