Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------TOE2(3)                                                                    ---------->DOF2                                                        <-----------HVH21                                                        <-----------TGA1  --------->GLK1(1)                                                   ------->TEIL <------MYB46(1)                                            <---------ALFIN1    <---------MYB46(3)              <----     --------->RVE1(1)                    --------->ANAC58      <------MYB83                    ----- ->DAG2                              ----------->ARR10 --------->bZIP60(2)<---------GLK1(1) <-------- --TOE2(3)                   <---------ALFIN1------->TEIL       ----------->GT1      <---------ICU4 >DOF2                   ----------->HVH21--------->ANAC58<-----------RAV1(2)        <---------GLK1(2)   tgcaaaaatatcgactagaaatgagggatgaccactgcttagagacgcacttgaacctcgtcagggaggttaaaggaaatctcataagaatttccatcac  17080800                                                                 <------NtERF2                                                                <---------ERF1                                                                ------>NtERF2                                                                <<<<<<<<<AtERF-4                                                                <<<<<<<<<AtERF-1                                                                <---------MYB46(3)                                                                <---------RAP2.3(1)                                                                <<<<<<<<<AtERF-2                                                                <<<<<<<<<AtERF-5                                                                <<<<<<<<<AtERF-3                                                               <---------ANAC46                                                               --------->ATERF1(2)                                                               <---------RAP2.3(3)                                                               <---------DEAR3(1)                                                               <---------RAP2.3(2)                                                               <---------RAP2.6(2)                                                              <------NtERF2                                                              --------->RAP2.6(3)                                                              --------->ATERF1(1)                                                             <---------ATERF1(1)                                                            <---------DEAR3(1)                                                            --------->ALFIN1                                                          <------MYB83  <---------------AGL15                                                          <------MYB46(1)                                                          <---------ANAC58                                                          <---------ANAC46                                                   <---------ANAC58    ----------------->AGL3       <------ZmHOX2a(2)                           <---------ANAC58    ----------------->AGL2      --------->ARR11(3)                        <----------DOF2<---------ATERF1(2)      <---------ARR11(3)--------->ICU4     <<<<<<<<<TBF1  <---------ANAC58 -----ANAC55(2)  --------->ZAT14    <---------ARR11(3)   --------->MYB55(2)              --------->YAB1 ---->ANAC55(2)  <---------ZAT14    --------->ARR11(3)   <---------MYB46(3) --------->YAB1  --------- ---HVH21    --------->GLK1(2)     <---------CCA1(2) <-----------RAV1(1)--------------->AGL15  ------   atgatcaagatcaaaattctgcagtaagtattcacatatatcttcttcttctttcttgttgggtggcggctagaccaaaaatagtagcaaataagaacgg  17080900                                                                                                  ---                                                                                                  <--                                                  --------->AHL20(2)                              <--                                              ---------->DOF2                                    ----                                          --------->ANAC46                                       ----                                      <----------DOF2 <---------AHL20(2)          --------->TOE2(3)                       --------->ANAC58   --------->ANAC58             <---------ANAC58         ----- >MYB52(1)             --------->ANAC46   --------->ANAC58             <---------ANAC58         <---- ----->GT1             --------->ANAC58 ---------->DOF2<---------ICU4  <---------ANAC46      ------>ZmHOX2a(2)   tttaaacttataacatgaaaaccacaagtcaaaattcaaactttaagccaaagaaaataatcgctacgaattggcgtatttatacctgaatttgatcgga  17081000                                                                    --------->HSFB2a(1)                                                                    --------->HSFC1(2)                                                                    <---------HSFC1(2)                                                                  <---------ARR11(3)                                                                  --------->AGP1                                                                  <---------ARR14(2)                                                        <---------MYB52(1)                                                       ------>NtERF2------>ZmHOX2a(2)                                                     --------->RAP2.3(1)                                                    <---------ATERF1(1)                                                    ------>NtERF2 --------->ARR14(2)           ----------->HVH21                        --------->LBD16 <---------HSFB2a(1)         --------->CCA1(2)                         --------->ANAC46<------ZmHOX2a(2)   --------->LBD16                                 --------->DEAR3(1) ------>ZmHOX2a(1) ------>HSFB2a(1)                       ==================================HOX2a_HOX2a -------HSFB2a(1)                       ------>ZmHOX2a(1)         <---------GLK1(2) -------HSFC1(2)                        ===================================HOX2a_HOX2a ----->ARR14(2)                       ----------->RAV1(2)         --------->ARR11(3)            ----- ------>TaMYB80                      =====================================HOX2a_HOX2a         <------ ---->ARR14(2)----------->RAV1(2)    ------>ZmHOX2a(1)--------->DEAR3(1)                  <----------DOF2 -----GLK1(2) --------->ZAT2----------->HVH21----------->HVH21   <---------At4g35610  <---------CCA1(2)   atctccgagagagacgacctgggcaatgctctgacattcctcctgctctgactccgccgcttgtttcagatccttccttcttctcttcatctcttttaac  17081100                                                                                                -----                                                                                        --------->GLK1(1)                                                                                     --------->LBD16                                                                                    --------->ANAC58                                                                                    --------->ANAC55(1)                                                                    <----------DOF2 --------->ANAC55(2)                                    ---------->DOF2             <---------ZAT18     <---------ANAC55(2)   <---------At4g35610            --------->AtMYB61            <---------ANAC46     --------->ANAC58   --------->At4g35610            ------->GAMYB                <---------ANAC58     --------->ANAC46 ---->ZAT6                       --------->MYB46(3)      <---------YAB1       <---------YAB1    <---- -----GT1                <---------ICU4    ---------->DOF2     <---------ANAC58    <---------LBD16   tcttcagctcaattctattcaaaaccaaaattacaaccaaaagagcaaaggggtctcttattcttgtgtgcttttggattttgaatacggaaatcgacga  17081200                                                                            <-----------TBP                                                                            --------->AHL20(2)                                                                          <-----------TBP                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                        <-----------TBP                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)                                                                      <-----------TBP                                                                    --------->AHL20(2)      <------MYB83                                                                    <---------AHL20(2)      <------MYB46(1)                                                                    <-----------TBP       <---------MYB52(1)                                                                  <---------AHL20(2)      <--------P                                                                  --------->AHL20(2)      --------->ALFIN1                                                                  <-----------TBP        <-------GAMYB                                                                <---------AHL20(2)     <---------TOE2(3)                                                              --------->AHL20(2)       <---------YAB1                                                              <---------AHL20(2)      <---------At5g28300                                                            --------->AHL20(2)   <---------AHL20(1)                                                           <---------ARR11(3)    --------->AHL20(1)                                               <-------GAMYB----------->TBP <---------AHL20(2)                     <-------GAMYB            <---------MYB46(3)--------->AHL20(2)   <-----------GT1                  <---------ZAT14           <---------MYB52(1)<-----------TBP <-----------TBP<-------                  --------->ZAT14         *TSS--------->MYB52(2)<-----------TBP <---------AHL20(2) ---->ARR11(3)    --------->ZAT18 --------->ANAC58         --------->ARR11(3) <---------AHL20(2) -----ARR11(3)    <---------ZAT18 --------->ANAC58         <---------AHL20(1) --------->AHL20(2)   tattaggggtttcgaatttgtgcagttggaagagcaacgcattacagtttgttgataagaatatatatatatatatatatatatatattacggttgggcc  17081300                                    --------->AHL20(2)                               <---------MYB52(1)                             <---------MYB46(3)                           <---------At4g35610                         --------->ZAT18                      <---------ANAC58                      <---------ANAC46                               <-----------------AGL1                      --------->ANAC55(2)                     <-----------RAV1(1)                      <---------ANAC55(1)                    <---------YAB1                      <---------O2  <---------AHL20(2)    <---------AHL20(2)                      <---------ANAC58                   --------->YAB1                 <----------DOF2   <---------AHL20(2)   <---------AHL20(2)          <---------MYB52(1)             <---------CCA1(2)<-------GAMYB            --------->AHL20(2)        <------NtERF2 --PCF5    <---------CCA1(2) ----------->GT1     ----------->GT1     ----------------->AGL1        <-   acgatgggccttcttatctcttttacgtgggctgttatttattttgttagcatgttatataatattgttgggccaatataggcctcgttatttatgaagt  17081400                                             <---------YAB1                                           <---------AHL20(2)                             <---------AHL20(1)                          <-------TEIL                 <------ZmHOX2a(1)        <---------AHL20(2)   --------->YAB1                <----------ID1       <---------MYB52(1)       <---------YAB1                <--------                ----------->GT1   <-------TEIL             <---------AHL20(2)               ---------          --------->AHL20(2) <---------AHL20(2)         --------->ARR11(3)      --------->AHL20(2)  <---------HSFB2a(2)        --------->AHL20(2)         <---------ARR11(3)    --------->AHL20(2)  ---  --------->HSFB2a(2)        --------->AHL20(1)  --------->AHL20(2)     <-----------GT1     <-------- ----------GT1 ----------->GT1<---------AHL20(2) <---------AHL20(2)  ----------->GT1    ---------->DOF2   ttttctcgacgaaaaaataggaaaaacaaaataaaattcgtttttttatttttaaatagattttatgagaatagttacatttttatatagaaaagatttt  17081500                                                 <------MYB83                                                 <------MYB46(1)                                                --------->MYB59                                   ---                                          <---------WOX13(1)                          --------->GLK1(1)                                        --------->ATHB51                             <---------GLK1(2)                                        --------->ATHB12                       --------->ZAT2     ---                     ------->MYC3      <---------AHL20(2)                      <---------ZAT2     <--   <-----------GT1   <-------MYC3      <---------YAB1                 <---------MYB52(1)         ---- -GLK1(2)      <---------ICU4        --------->YAB1 <-------TEIL     --------->ZAT2  --------->ARR14(2) >ARR11(3)<-----------GT1           --------->AHL20(2)               --------->At4g35610       ------ ------>YAB1--------->ANAC55(2)     <---------AHL20(2)    ----------->GT1   ---------->DOF2 <-------- -ARR11(3)<---------AHL20(2)  --------->TOE2(3) <---------AtMYB61--------->ANAC46    <---------ARR14(2)   tcatatttctatttacataatcacatgctaaaccacaatttataattggtttggttcattctgttataagcagttggccaaagctcggatttgcagataa  17081600                                                                                        <---------ANAC58                                                                                     ------->MYC3                                                                                     <-------MYC3                                                                                     ------->PIF4                                                                          <---------YAB1<---------ANAC58                                                                       <---------YAB1<-------PIF4 ------>YAB1                                                      <---------At4g35610<-------MYC4 ----->HAHB4                                                 --------->ZAT14         ------->MYC2 -------ICU4                                                 <---------ZAT14         ------->PIF5 ----->ICU4                                        --------->REM1(2)<---------YAB1   <-------MYC2 --->YAB1         <----------DOF2               <---------ANAC46<-----------RAV1(2)  <-------PIF5 -At4g35610    <---------YAB1        <-----------GT1         --------->ZAT18<---------AHL20(2)<------   taatgacacatcgatttatgctttgagccttgatgagttttacaagattagtgtgtatagaagagcacagatgattattttttggcacatgcttgtttgt  17081700  Previous    Next  AGI:  At2g40920.1    Description:  F-box family protein. Identical to F-box/LRR-repeat protein At2g40920 [Arabidopsis Thaliana] (GB:Q2V414;GB:O22206); similar to F-box protein-related [Arabidopsis thaliana] (TAIR:AT2G40910.1); similar to class S F-box protein [Nicotiana alata] (GB:ABR18790.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 17079542    to: 17081242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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