Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->ATHB51                                 <--------HAHB4                                 -------->HAHB4                      <---------ANAC58                                 -------->ATHB1                      <---------ANAC46                                 <---------ICU4                      <---------ANAC58                                 --------->YAB1                  <---------ANAC58                                <---------ATHB51                 <---------ANAC58                                <---------YAB1           <-----------ARR10                              <---------ICU4             --------->ARR11(3)              --------->AHL20(2)--------->ICU4           <---------ARR11(3)   <----------DOF2         --------->ANAC55(2)           --------->GLK1(2) --->ZmHOX2a(2)      --------->LBD16<-----------GT1     --------->RVE1(1)                          -- ------At4g35610 --------->ARR14(2)<---------YAB1     --------->AHL20(2)  --------->GLK1(2)    ------ --DOF2 ------>ZmHOX2a(1)  <---------ANAC55(2)  <xxxxxxxxxxxxxxxxsmallRNA(i)       <----------DOF2<--   tctcactttcctacaaaaaaatccccaatacataattattactaccaaaaaaaaaaaaaaatctaagtcttgcgagaatcgatttctttagaagaaatat  17072400                                    <---------MYB46(3)                                    <-----------RAV1(1)                --------->MYB52(1)                                    --------->ALFIN1                --------->ANAC58     <---------ANAC46              <---------DEAR3(1)               <---------ANAC55(2)      <------ZmHOX2a(1)  <----------DOF2                 --------->At4g35610    --------->ANAC58                 <---------HSFB2a(2) <---------DAG2                 <---------RAP2.3(2)      --------->ANAC58                 --------->HSFB2a(2) ----->TEIL                     <---------RAP2.6(2)   <---------SPL7--------->ANAC55(2) --------->WRKY18(1) --------->AtSPL8              <---------At4g35610  <---------ANAC46--------->ANAC58--------->LBD16 ---------GT1            --------->ZAT18   ---------->DOF2  ----------->RAV1(1)     <---------LBD16   gtacctttcggagagaagagcgaagggtgcgatagcggctgtggcaaaagcgttgcggtatgcaacaagaacgtaatggctcataccgcggtctaggacg  17072500                         --------->ARR14(2)                        <---------GLK1(1)                        <---------CCA1(2)                                                      ------                      <---------ANAC46                             <---------GLK1(2)           <-----                      <---------ANAC58                         --------->At4g35610       --------->TOE2(3)                      <---------ANAC58                         <---------At4g35610       --------->YAB1                   --------->TOE2(2)                    <---------TOE2(3)      ------>ZmHOX2a(1)                   --------->TOE1(2)                    <---------TOE1(3)     --------->TOE1(3)------             <-------TEIL<---------ARR14(2)       <---------------AGL15       --------->TOE2(3)<-----   gttttagttactaagttcatacctgcgtatccgaactgaagacagaccattgcaaaataaggtttagctgattctgacatccttaatcccatcttaatat  17072600                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                --------->HSFB2a(2)                                                              ------>ZmHOX2a(1)                                                            ==============HOX2a_HOX2a                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                    ---------->DOF2        ===============HOX2a_HOX2a                                   --------->YAB1         <---------ARR14(2)                                  <---------ATHB12        --------->ARR11(3)                                 ------>MYB46(1)          <---------ARR11(3) --->ARR11(3)                    ------>MYB83             --------->ARR14(2)  ----------->GT1    ---- ----AHL20(2)                   --------->WOX13(1)       <------ZmHOX2a(1)<---------AHL20(2)  <------ --->AHL20(1)          --------->ANAC58                <---------TOE2(3) --------->AHL20(2)   <------ ----AHL20(1)          --------->ANAC58            <---------YAB1  <------ZmHOX2a(1)     <---------ZAT6   tttgtttttgtttttgttttagagcaagaaaaaccaatcaaagttttggagttattttaggatcctcgaggacaaaaaaattgtcaaattagtgttatgt  17072700                                                          ------>ZmHOX2a(1)       -------------------                                                          --------->LBD16         <----------DOF2                           <------ZmHOX2a(1)       <----------DOF2              <-------TEIL --->TEIL          ---------->DOF2                 <---------DAG2              --------->GLK1(2)   <- ---ANAC46       <------ZmHOX2a(1)           <---------KAN4(2)                 <---------ARR14(2)  <- ---ANAC55(2)  --------->MYB59               --------->GLK1(2)*TSS   --------->ALFIN1   <-----------TBP   atataagaaaactgagttaggaaaagagaggagagaaacacttggagaatgtgctttttcctgagaaccaagtggtgagaggttctttgtatatatagca  17072800                                                                                        -------->HAHB4                                                                                       <---------ATHB51                                                                                   <---------MYB52(1)                                                                                  --------->TOE2(3)                                                                                 <---------ZAT6                                                                                <---------TOE1(3)                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                           --------->O2--------->ICU4                                                                           <---------TGA1a                                                                           --------->TGA1a                                                                           <---------bZIP60(1)                                                                           --------->bZIP60(1)                                                                           <---------O2<---------YAB1                                                               <---------AHL20(2)----------->GT1                  --------->ZAT14                         --------->AHL20(2)   <---------DOF5.7(2)        <---------GLK1(1)                                 <---------AHL20(1) <---------MYB52(1)       <---------ARR14(2)                                 <---------AHL20(2) --------->DOF5.7(2)       --------->ARR14(2)                             <---------AHL20(2)   <---------ANAC58   <---------LBD16<---------ZAT14                    <---------YAB1       ----------->STF1        --- -->WRI1--------->GLK1(1)  --------->GLK1(1)        <---------AHL20(2)  ----------->TGA1<---------ICU4 --------AHL20(2) <---------ZAT18  ==================================================bZIP_DOF ------- --------YAB1  <---------ANAC46    <----------DOF2<---------YAB1        ----------->HVH21   <--------   tattattcggatatgttcagtgttctctgatttcttcctttgtatttttgttatttttattttattttttttcggtgacgttagcgttaattattccggt  17072900                                                                             <---------YAB1                                                                       <---------ARR11(3)                        <---------YAB1  ---------->DOF2                --------->AHL20(1) -------->ARR10  <---------ANAC46   --------->ZAT6                     --------->ARR11(3) -->LBD16        <---------ANAC58 <---------ARR11(3)                  <---------AHL20(2)            - -LBD16          <---------ANAC58<---------ICU4  ----------->GT1    --------->AHL20(2)     <---------ANAC46   ttgattcggcataagaattgggtgtcatgaattcattatctctaaagtaagtggataaaacattctacatatatatattctgtttatatgacttcgtgaa  17073000           <------ZmHOX2a(1)   --------->YAB1                                                              --------->AHL20(2)  <---------ATHB12                                 ---------->DOF2             <---------AHL20(2) ------>MYB83   <---------AHL20(2)            ----------->GT1     --------->ALFIN1 ------>MYB46(1)--------->AHL20(2)           <---------TOE2(3)  --------->ALFIN1    <-----------GT1-- -------->WOX13(1)                    ---------->DOF2       <---------YAB1    <---------WOX13(1)<----   accaatcatattaggattttaaataaaacttgtggctactaaaagtcgaggttaaaagtgtgatcagtgtggaacaagtgattaattaacatcacctcat  17073100        --------->YAB1       <<<<<<<<<ARR2       <---------ATHB12                                                   <---------REM1(1)     --------->WOX13(1)                                                <-----------RAV1(1) ------->TOE2(3)      <---------YAB1                          --------->TOE2(3) -----CCA1(2)  <-----------GT1           --------->MYB52(2)----------->RAV1(1)          <----------ID1   ttcttaacaatcaaaatttacatgtttatagtagtatatgttttagttgcacaaaaaacaacaacattagtatatgttgtagttgcaaaaaaaacaaaaa  17073200                                                            --------->AtLEC2                                                  --------->AHL20(1)                                                 --------->AHL20(2)                                       <-------TEIL  <---------AHL20(2)                         <---------ANAC55(2)     <---------AHL20(2)                         --------->ANAC58       --------->AHL20(2)                         --------->ANAC46 ----------->GT1   --------->ANAC58                         --------->ANAC58------->TEIL--------->AHL20(2)                         --------->ANAC55(2)    <---------AHL20(2)        <-------TEIL     --------->ANAC55(1)    <---------AHL20(1)    <----------DOF2    <---------ICU4       ----------->GT1<---------AtLEC2    --------->ANAC46   --------->ICU4--------->ZAT6       --------->AtLEC2      --------->ANAC58   aactaataagtacatatggacactaaaacgtaattctaacatgcatgtaaattattttattcatgcaattggctttaaacatggttttttttttttttaa  17073300  Previous    Next  AGI:  At2g40900.1    Description:  nodulin MtN21 family protein. similar to integral membrane family protein / nodulin MtN21-related [Arabidopsis thaliana] (TAIR:AT3G56620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18247.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 17070200    to: 17072762    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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