Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->LBD16                     <---------ANAC58                     <---------LBD16           <---------LBD16                     <---------ANAC58       <---------ZAT2                     <---------ANAC46      <---------ARR14(2)              --------->ATHB12                    <---------LBD16        --------->ARR14(2)        <----------DOF2               <---------YAB1        --------->ALFIN1         --------------->AtSPL3   tcgaattcaaacgaatgaagattgcgggagtgagagggagagggggaactggggaagagaagaaacagtacctttagcgattggggagagaagagtgaag  17064100                                                      <-------MYC2                                                      <-------MYC3                                                      ------->MYC2                                                      ------->MYC3                                            ------>ZmHOX2a(1)                       ------>ZmHOX2a(2)<---------ARR11(3)  <------MYB83                      -------          <---------At4g35610        ----------->RAV1(1)    <------MYB46(1)                 <--------          --------->At4g35610  <-----------RAV1(1)  ------->TEIL                          <---------ALFIN1 >>>>>>>>>TBF1         ============================HOX2a_HOX2a   <-----------GT1     <-----------GT1   gaagaagaagggagatgaagagggatcgattcactggtgcaacatcctctaatgcatgtgtttggtttcacaatttccatcaccatttttctccaccgga  17064200                                                  --------->LBD16   --------->MYB52(1)                  --------->DEAR3(1)   <---------TOE1(2)  --------->TOE1(2)              ----------->TGA1<-----------------AGL1 <---------MYB52(2)         <---------ANAC58 --------->ARR14(2)              --------->TOE1(1) -->LBD16              <------ZmHOX2a(2)------>NtERF2       *TSS        --------->ARR14(2) -LBD16   --------->MYB52(1)<---------ANAC58 <---------GLK1(1)      --------->ZAT6           <-------   aaaacaaacgacgaacagagaaccgatcgagcgtgatgacgacgacgaattccccaatttcgcagtttcaacagtaacctcgtagaatgcataccgtttt  17064300                                   --------->ANAC46                                   <---------ALFIN1                       <---------YAB1                      --------->AHL20(2)                                   <-----------HVH21                     --------->AHL20(2)   --------->ALFIN1                <----------DOF2       -----                     <---------AHL20(2) <---------ANAC58             ----------->HVH21     --------->ANAC58          --------->ANAC58  --------->ANAC46    <----------DOF2      --------->WRKY12      --------->ANAC58          <---------HSFB2a(1)    <---------ALFIN1                    --------->WRKY38(1) ---------->DOF2          --------->HSFB2a(1)  --------->AtMYB61<---------DAG2     <----------DOF2       ============          --------->ANAC58  <-----------GT1   ------>NtERF2    <---------CCA1(2)      --------->ANAC58 --MYB52(1)         --------->AHL20(2)  <---------ANAC58     <---------CCA1(2)        --------->ANAC58   catgtgtttggaacgctctcaaattaatataaaccacacacagcgtgccgctttttgtttttcttatctctttgacctttcagagagaacgaaacgcaca  17064400                  <-----------HVH21                                              --------->O2                -------->ABF1                                                    <---------TGA1a                ------->MYC3                                                   >>>>>>>>>>DREB2A                <-------MYC2                                                   >>>>>>>>>>DREB1A                ------->MYC2                                                   <---------DDF1                <-------MYC4                                                --------->MYB52(1)                ------->MYC4                                               --------->CCA1(2)                <-------MYC3                                              --------->ARR11(3)               --------->TGA1a                                        =====================bZIP_DOF               <---------O2               <----------DOF2         ----------->GT1<---------O2               <---------TGA1a        ---------->ID1              <---------ANAC55(2)               --------->ANAC55(2)   <-----------HVH21            --------->ANAC55(2)               <---------ANAC55(2)<---------ANAC58                <---------ANAC46                 --               --------->O2     <---------WRKY18(1)           <---------MYB52(2)*TSS               --               <--------ABF1    >>>>>>>>>WRKY18   --------->TOE1(3)   ---------->DOF2          ------     --------->At4g35610     <---------ANAC58  <---------CCA1(2)--------->MYB52(1)           --------     <---------At4g35610     <---------ANAC58--------->YAB1  --------->ANAC58  <---------RAP2.6(3) --   <-----------RAV1(2)  <---------MYB46(3)=================================================bZIP_DOF<- ---->DEAR3(1) ======================================bZIP_DOF--------->ANAC58--------->DEAR3(2)------ ========================bZIP_DOF <---------ANAC58--------->TOE2(3)--------->TOE2(3)         --------   gcctctcaggtgaagacacgtgtcatttgttccttgacttgtcactttcataccttaatcgccaagtaacgtaaaagataccgacatggccaaaacctac  17064500 ------->GLK1(2)                                              <---------MYB52(1) ----->TEIL                                                  <-------GAMYB >MYB83                                                     ------>ZmHOX2a(2) ->TOE2(2)                                                --------->ARR14(2) ------->ARR14(2)                                      --------->HSFB2a(2) --------ARR14(2)                            ---------->DOF2----------->GT1 >MYB46(1)                        <---------TOE2(3)    <---------HSFB2a(2) ->TOE1(2)       --------->YAB1  ---------->DOF2    <---------ARR14(2)                   --------->WOX13(1)   gaatctgaaatttgaagaagcataagtttgtctattaaagatggaatcaaagacgttctggatcgttactcttcttctctgtggaacaattcaattagcg  17064600                                                                        <<<<<<<<<<<<<<<<<LFY                                                         ------>ZmHOX2a(2)                                                         ==============HOX2a_HOX2a                                                        --------->GLK1(1)                                                        <---------GLK1(1)     --------->ZAT14                                                       --------->ARR11(3)<---------ZAT14                                                       <---------ARR11(3)--------->ZAT14                                                  <-------TEIL       --------->YAB1                                               <---------ANAC58   --------->GLK1(1)                ---------->DOF2                <---------ANAC58 <------ZmHOX2a(1)         --------->At4g35610                   <---------ANAC46 ============================HOX2a_HOX2a      <------ZmHOX2a(2)                       <------NtERF2  --------->HSFB2a(2)     --------->ARR14(2)                    <------ZmHOX2a(1) --------->LBD16  <---------ZAT14     <---------ARR14(2)                    =====================HOX2a_HOX2a  --------->ALFIN1    <---------At4g35610              <---------YAB1--------->YAB1 <---------GLK1(1)  <------ZmHOX2a(2)   atttgcagatcagaagagaaaagcacagagaagacgatgatgctaggaggcgttcatgatctccgaggaaatcagaacagtggagagatcgagagtctcg  17064700                                                                      --------->TOE1(2)                                                                      --------->TOE2(2)                                                                   <-----------GT1 <----------DOF2                                                                --------->YAB1 <---------CCA1(2)                                                               <---------YAB1 --------->ARR11(3)                                                              <---------AHL20(2)<---------ARR11(3)                                                              --------->AHL20(2)--------->ARR11(3)                                                            <---------YAB1    <---------ARR11(3)                                     <---------AHL20(2)  <---------YAB1  <---------YAB1<---------At4g35610                        --------->ANAC46    ------>ZmHOX2a(1)--------->YAB1   <---------AHL20(1)         --------->AtLEC2            --------->AHL20(2) ------>ZmHOX2a(2)<---------ATHB12    <-----------GT1   --------->MYB46(3)    ===================HOX2a_HOX2a  ------->TEIL   ctcgatttgccattcaagaacataacaaacaacaggtttttaaatcctctgttttcgatctgattataataacctatgaatatatctttatctgattagt  17064800                                                                     --------->MYB111(1)                                                                     --------->MYB46(2)                                                                     <---------MYB46(3)                  <-------TEIL                                       --------->MYB52(2)              <---------------AtSPL8                                 --------->MYB111(2)              --------->MYB111(1)                                   <--------P              <---------------AtSPL3                              ------------>MYB.PH3(2)             <--------P                                         <-----------RAV1(2)             -----          --------->LBD16                             --------->ANAC58                    --------->ANAC46         <---------LBD16                              --------->ANAC58<-------GAMYB   ------->TEIL         <---------ANAC46                           ---------->DOF2<---------MYB52(1)<-----------GT1-        <---------LBD16                       <---------GLK1(2)<---------ZAT2<------ZmHOX2a(1) ------      <-----------GT1                   <---------HSFB2a(2)    <---------At4g35610--------------->AtSPL8   ttttgttttttccgggtaagtacagaacaaaattcttgagttcaagaagattgtcaaagcaagggagcaggtagttgcaggaacgatgtaccacttaacc  17064900                                                    --------->ANAC58                    --------->ANAC58      ---------->DOF2                               --------->ANAC58                    --------->ANAC46  --------->ANAC58                            <---------MYB46(3)                        --------->ANAC58  --------->ANAC58                           --------->ALFIN1                      --------->GLK1(1) ---->TOE1(3)            <---------TOE2(3) --------->ALFIN1                      <------ZmHOX2a(1) --------->DOF2  <---------At4g35610       <-----------RAV1(1)            --------->At4g35610 ------- --->ZAT6        --------->At4g35610   ---------->DOF2          ------->TEIL  <-----------RAV1(2)   ctagaagcaaaagaaggtgatcagactaagaattttgaagccaaagtgtgggtgaagccatggatgaacttcaaacagttgcaggagttcaaggaatcat  17065000  Previous    Next  AGI:  At2g40860.1    Description:  protein kinase family protein / protein phosphatase 2C ( PP2C) family protein. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G31750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18252.1); similar to hypothetical protein OsJ_002076 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12251.1); similar to hypothetical protein OsI_002275 [Oryza sativa (indica cultivar-group)] (GB:EAY74428.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein phosphatase 2C, N Range:  from: 17060646    to: 17064260    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g40880.1    Description:  FL3-27; cysteine protease inhibitor. Identical to Cysteine proteinase inhibitor 3 precursor (CYS3) [Arabidopsis Thaliana] (GB:Q41906;GB:O22202;GB:Q8RXS7;GB:Q9FXN6); similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.2); similar to cysteine protease inhibitor [Populus tomentosa] (GB:ABK20187.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 17064480    to: 17065200    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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