Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                            <---------AHL20(2)                                                   <---                           --------->AHL20(2)                                                  <-----                     --------->ANAC58                                        ------>ZmHOX2a(1) <-----                     --------->ANAC58                            <---------ZAT2              <-------                    --------->SPL7                               --------->At4g35610         <-------                <---------------AtSPL3          ---------->DOF2  <---------At4g35610   <-----------HVH21 --->GT1        <---------------AtSPL8 ----------->GT1           --------->ZAT2   <---------ARR14(2)   aaaaacaacattttgaaaatggtacgaaatttaaaatggaaatggaaaatgaaagagagaccatgagagctgcaaattcctgtggaacttgtcaaggtca  17063900             --------->CCA1(2)          --------->ANAC58 ----->At4g35610 ------At4g35610                                --------->GLK1(2) ----WRKY38(1)          <---------At4g35610 <---------HSFB2a(2)              ------>ZmHOX2a(1) ----WRKY12 --------->ARR14(2)              --------->HSFB2a(2)              --------->LBD16 ----HVH21--------->ANAC58 <---------At4g35610 <---------GLK1(2)           ------>ZmHOX2a(2) --ARR11(3) <---------ARR14(2)        ------>NtERF2             <---------ALFIN1      <-----------GT1   tcggaagtagacaagataggcttcttcgctgctactcttcggccatcgagaatcgcttcataaacaacactctctgatcctgaaaatttctccagacaaa  17064000                      --------->LBD16                     <---------ANAC58                     <---------ANAC58          <---------LBD16                     <---------ANAC46       <---------ZAT2                     <---------LBD16       <---------ARR14(2)              --------->ATHB12                    <---------LBD16        --------->ARR14(2)        <----------DOF2               <---------YAB1        --------->ALFIN1         --------------->AtSPL3   tcgaattcaaacgaatgaagattgcgggagtgagagggagagggggaactggggaagagaagaaacagtacctttagcgattggggagagaagagtgaag  17064100                                                      <-------MYC2                                                      ------->MYC3                                                      ------->MYC2                                                      <-------MYC3                                            ------>ZmHOX2a(1)                       ============================HOX2a_HOX2a                                -------          <---------At4g35610        ----------->RAV1(1)    <------MYB46(1)                 <--------          --------->At4g35610  <-----------RAV1(1)  ------->TEIL <-----------GT1          <---------ALFIN1 >>>>>>>>>TBF1         ------>ZmHOX2a(2)<---------ARR11(3)  <------MYB83             <-----------GT1   gaagaagaagggagatgaagagggatcgattcactggtgcaacatcctctaatgcatgtgtttggtttcacaatttccatcaccatttttctccaccgga  17064200                                                  --------->LBD16   --------->MYB52(1)                  --------->DEAR3(1)   *TSS  --------->TOE1(2)              ----------->TGA1<-----------------AGL1 <---------MYB52(2)         <---------ANAC58 <---------GLK1(1)          --------->ARR14(2) -->LBD16              <------ZmHOX2a(2)------>NtERF2       <---------TOE1(2)--------->TOE1(1) -LBD16   --------->MYB52(1)<---------ANAC58 --------->ARR14(2)     --------->ZAT6           <-------   aaaacaaacgacgaacagagaaccgatcgagcgtgatgacgacgacgaattccccaatttcgcagtttcaacagtaacctcgtagaatgcataccgtttt  17064300                                   <---------ALFIN1                                   --------->ANAC46                       <---------YAB1                      --------->AHL20(2)                                   <-----------HVH21                     <---------AHL20(2)   --------->ALFIN1                <----------DOF2       -----                     --------->AHL20(2) <---------ANAC58             --------->WRKY12      --------->ANAC58          --------->ANAC58  <-----------GT1     <----------DOF2      ----------->HVH21     --------->ANAC58          <---------HSFB2a(1)    <---------ALFIN1                    --------->WRKY38(1) ---------->DOF2          --------->HSFB2a(1)  --------->AtMYB61<---------DAG2     <----------DOF2       ============          --------->ANAC58  --------->ANAC46  ------>NtERF2    <---------CCA1(2)      --------->ANAC58 --MYB52(1)         --------->AHL20(2)  <---------ANAC58     <---------CCA1(2)        --------->ANAC58   catgtgtttggaacgctctcaaattaatataaaccacacacagcgtgccgctttttgtttttcttatctctttgacctttcagagagaacgaaacgcaca  17064400                  <-----------HVH21                                              --------->O2                ------->MYC4                                                     <---------O2                ------->MYC3                                                   <---------DDF1                <-------MYC3                                                   >>>>>>>>>>DREB1A                -------->ABF1                                                  >>>>>>>>>>DREB2A                <-------MYC4                                                --------->MYB52(1)                ------->MYC2                                               --------->CCA1(2)                <-------MYC2                                              --------->ARR11(3)               ======================================bZIP_DOF         =====================bZIP_DOF               --------->O2                                       <---------ANAC46               <--------ABF1              =================================================bZIP_DOF               <---------TGA1a        ---------->ID1              --------->ANAC55(2)               <---------ANAC55(2)   <-----------HVH21            ----------->GT1<---------TGA1a   <-               --------->ANAC55(2)<---------ANAC58                <---------ANAC55(2)              --               <---------O2     >>>>>>>>>WRKY18   --------->TOE1(3)   ---------->DOF2              --     --------->At4g35610     <---------ANAC58  <---------CCA1(2)--------->MYB52(1)             ------     <---------At4g35610     <---------ANAC58--------->YAB1   <---------MYB52(2)*TSS         --------   <-----------RAV1(2)  <---------MYB46(3)<----------DOF2    --------->ANAC58  <---------RAP2.6(3) -- ---->DEAR3(1) --------->TGA1a  <---------WRKY18(1)          --------->ANAC58--------->DEAR3(2)------ ========================bZIP_DOF <---------ANAC58--------->TOE2(3)--------->TOE2(3)         --------   gcctctcaggtgaagacacgtgtcatttgttccttgacttgtcactttcataccttaatcgccaagtaacgtaaaagataccgacatggccaaaacctac  17064500 --------ARR14(2)                                             <---------MYB52(1) ------->GLK1(2)                                             <-------GAMYB ------->ARR14(2)                                           ------>ZmHOX2a(2) >MYB46(1)                                                --------->ARR14(2) ->TOE2(2)                                             --------->HSFB2a(2) ----->TEIL                                  ---------->DOF2----------->GT1 >MYB83                           <---------TOE2(3)    <---------HSFB2a(2) ->TOE1(2)       --------->YAB1  ---------->DOF2    <---------ARR14(2)                   --------->WOX13(1)   gaatctgaaatttgaagaagcataagtttgtctattaaagatggaatcaaagacgttctggatcgttactcttcttctctgtggaacaattcaattagcg  17064600                                                                        <<<<<<<<<<<<<<<<<LFY                                                         ------>ZmHOX2a(2)                                                         ==============HOX2a_HOX2a                                                        <---------GLK1(1)                                                        --------->GLK1(1)     <---------ZAT14                                                       <---------ARR11(3)<---------ZAT14                                                       --------->ARR11(3)--------->ZAT14                                                  <-------TEIL       --------->YAB1                                               <---------ANAC58   <---------GLK1(1)                ---------->DOF2                <---------ANAC58 ============================HOX2a_HOX2a         --------->At4g35610                   <---------ANAC46 <------ZmHOX2a(1)      <------ZmHOX2a(2)                       <------NtERF2  --------->HSFB2a(2)     <---------ARR14(2)                    <------ZmHOX2a(1) --------->LBD16  --------->ZAT14     --------->ARR14(2)                    =====================HOX2a_HOX2a  --------->ALFIN1    <---------At4g35610              <---------YAB1--------->YAB1 --------->GLK1(1)  <------ZmHOX2a(2)   atttgcagatcagaagagaaaagcacagagaagacgatgatgctaggaggcgttcatgatctccgaggaaatcagaacagtggagagatcgagagtctcg  17064700                                                                      --------->TOE2(2)                                                                      --------->TOE1(2)                                                                   <-----------GT1 <----------DOF2                                                                --------->YAB1 <---------CCA1(2)                                                               <---------YAB1 --------->ARR11(3)                                                              <---------AHL20(2)--------->ARR11(3)                                                              --------->AHL20(2)<---------ARR11(3)                                                            <---------YAB1    <---------AHL20(1)                                     <---------AHL20(2)  <---------YAB1  <---------ATHB12                        --------->ANAC46    ===================HOX2a_HOX2a    <---------ARR11(3)         --------->AtLEC2            --------->AHL20(2) ------>ZmHOX2a(2)<---------YAB1<---------At4g35610    <-----------GT1   --------->MYB46(3)    ------>ZmHOX2a(1)--------->YAB1 ------->TEIL   ctcgatttgccattcaagaacataacaaacaacaggtttttaaatcctctgttttcgatctgattataataacctatgaatatatctttatctgattagt  17064800  Previous    Next  AGI:  At2g40860.1    Description:  protein kinase family protein / protein phosphatase 2C ( PP2C) family protein. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT4G31750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18252.1); similar to hypothetical protein OsJ_002076 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12251.1); similar to hypothetical protein OsI_002275 [Oryza sativa (indica cultivar-group)] (GB:EAY74428.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein phosphatase 2C, N Range:  from: 17060646    to: 17064260    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g40880.1    Description:  FL3-27; cysteine protease inhibitor. Identical to Cysteine proteinase inhibitor 3 precursor (CYS3) [Arabidopsis Thaliana] (GB:Q41906;GB:O22202;GB:Q8RXS7;GB:Q9FXN6); similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT3G12490.2); similar to cysteine protease inhibitor [Populus tomentosa] (GB:ABK20187.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 17064480    to: 17065200    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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