Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ==============HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                   ===============HOX2a_HOX2a                                                                  <---------AGP1                                                                  <---------ARR14(2)                                                                  <---------ARR11(3)                                                                  --------->ARR14(2)                                                                  --------->ARR14(3)                                                                  --------->ARR11(3)                                                                  <-----------ARR10                                                        <---------ZAT2                                            ------->TEIL--------->ZAT2                                           <---------GLK1(2)--------->ALFIN1                                    --------->YAB1      <---------At4g35610                                    ------->GAMYB     <---------HSFB2a(2)                        --------->At4g35610<---------ARR11(3)     <---------ARR14(3)                        ----------->RAV1(2)--------->ARR14(2)     --------->GLK1(2)                     ----------->HVH21     <---------ARR14(2)   ----------->ARR10                 --------->ZAT18   --------->MYB46(3) --------->HSFB2a(2)             <---------ANAC46                <------ZmHOX2a(1)--------->WOX13(1)  ----------------->AGL1     <---------TOE2(3) --->HVH21  ---------->DOF2     <---------WRKY12     <-----------------AGL1------>ZmHOX2a(1)   tttggactcgcttctaaaggacactgacctgaagtcaaccatcaagaacctcgtttccagcagtggaagatctgttcctgctaatgtttctggtgaagac  17057800                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                --------->MYB59                                                      --------->ANAC58        <---------MYB52(1)                                        --------->ANAC58                    ------>ZmHOX2a(1)                                        --------->ANAC58                  ----------------->AGL1 <---                                <---------ANAC58      --------->ANAC58 <---------GLK1(1)         <---             <------ZmHOX2a(1)  <---------ANAC58     --------->DAG2    --------->GLK1(1)         <---    ---------->DOF2          <---------ATHB12       ---------->DOF2 <---------YAB1          <--------   atcaacaaaagccgaggagaagttatagccaatggctcgactaagccaaacccataaagcaataagccttctgatttcctgtttggttccacatatgttg  17057900                     --------------->AGL15                     <---------------AGL15                   --------->WOX13(1)                  --------->ZAT6                 <---------YAB1            --------->YAB1            <--------HAHB4            <---------ICU4          <-----------GT1         --------->YAB1                       <---------ICU4        <---------YAB1                        --------->ATHB12                                    ---        --------->ICU4--------->YAB1         <---------YAB1                                       --- ------ANAC58  <---------ICU4       <---------ARR11(3)                                            <-- ------ANAC58 <---------YAB1      --------->ANAC58                                             ------ ------ANAC46 --------->ICU4      --------->ANAC58                                   ------>ZmHOX2a(1) ---RAV1(1)<---------YAB1  <---------------AtSPL8                           <-----------RAV1(1)<-----   cttattagttattatcattatcactcaaaatagtacaagctctcaacatcattgtccataagacataaaactctgtatttgttgttcctgtccaaaataa  17058000                                                                             -------->HAHB4  ------>ZmHOX2a(1)                                                          --------->YAB1 --------->TOE2(3)                                                       --------->AHL20(2) ------>ARR14(2)                                                         --------------->AGL15 ------>ARR11(3)                          <---------TOE2(3)              <---------AHL20(2)         - -------ARR14(2)                     <----------DOF2                <----------DOF2              ---- --->AHL20(2)                    <--------P                 <-----------GT1  <---------ICU4     <---- ----AHL20(2)                <------ZmHOX2a(1)             <-----------GT1  <---------YAB1<---------YAB1   aatcctcaattttcggtgttaacttagataaggaggtagcttttaagttttttttttttttttaacctttcttttttaattatagcaaaactctgatttt  17058100                                                                              --------->DAG2             --------->LBD16      ---------->DOF2                --------->AHL20(2)            <---------LBD16--------->ANAC58                      <---------AHL20(1)      ---------->DOF2      --------->ANAC58                      <---------AHL20(2)   ------->GAMYB ---------->TaMYB80                     --------->MYB52(1)   ---------->DOF2       -- -------->MYB52(1)         <---------ANAC55(2)       --------->YAB1        <------ZmHOX2a(1)   ------ ----->YAB1<---------LBD16 ----------->GT1      --------->YAB1   --------->AHL20(1)            <----- -----YAB1 --------->TOE1(2)--------->TOE2(3) <-----------TBP   --------->AHL20(2)         ----------   cataaccgaaaaacgcgggaatatcagaaacgtaaataaagaagagacatttatagcataacagaaataaatttagaggaaaagggttttgaagaaagag  17058200                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                -----                                                                        <------ZmHOX2a(1) ----------- ------------------------>ANAC81                                       <----------ID1   <---------At4g35610 *TSS                                                               ---------->DOF2     --------->LBD16 ------->AHL20(2)                  --------->HSFC1(2)          <------ZmHOX2a(1)      <---------LBD16 ----->GT1                   <------ZmHOX2a(1)              <---------LBD16         <-----------GT1<- -----ID1             ---------->DOF2         ---------->DOF2 ----------->GT1<---------GLK1(2) >>>>>> >DOF2            ---------->DOF2  <---------HSFC1(2)       <-----------RAV1(2)  <---------AHL20(2)<-   aaaaaataagaaaacaaaaaaaaagaaaggaggaagaagtatcgtttcgaaagaggggagtctcaggaaaaaaaggacagaatttttttccggtgacagt  17058300 ---------DEAR3(2) ------->ETT(1)                                                                                 <---- --------DREB2C(2)                                                                             ------ --------At1g77200                                                                             ------ ---->ALFIN1                                                                                   ------ >HVH21                                                                   <-------TEIL         ------ --------DEAR4(1)             <---------ATHB12 --------->LBD16      <---------LBD16        --------->HSFB2a(2) >>>SUP ----------->HVH21----------------------->TaNAC69(2)      --------->ARR14(2)        <---------HSFB2a(2) --------DEAR3(1)------>ZmHOX2a(1)      <---------CCA1(2)        <---------ARR14(2) <---------GLK1(2)   gtcggtgtctctgacgctcctctctgttttcaatctttctccgtctctccctgaatgccttcgtccgtattcagggttcgtctattgattcttctccaag  17058400                                                                                  <--------P                                                                                --------->ATHB12                                                                            <-------TEIL                                                                       ------>NtERF2<------MYB46(1)                                                                       <------NtERF2<------MYB83       --------->YAB1                                                 --------->LBD16       <---------ICU4                                                 <---------RAP2.3(1)      <---------ATHB12                                               <---------RRTF1(2)      <---------YAB1                                                 <---------ANAC46 --------->YAB1       <---------ZAT2                                 <---------RRTF1(3) --------->TOE2(3)    --------->At4g35610                            <---------DEAR3(1)          <--- -----ATHB12          <---------At4g35610                            <---------RAP2.3(2)      ------- --->AtLEC2           --------->ZAT2                                 <---------RAP2.6(2)<------ZmHOX2a(1) --->ANAC58        <---------ANAC58                       <---------At4g35610   <---------MYB46(3)  - --->ANAC58        <---------ANAC58             <----------DOF2     <---------LBD16--------->MYB111(2) --->ANAC46 <----------DOF2         --------->YAB1        --------->At4g35610  <---------YAB1 <------   caatcttaatcattctttaaggcctgcttccatgtgaatcatcttcttctcttttgtttctgcagaaaattgcggcgattcatggttggaggagcgaata  17058500                                   --------->ANAC58      <<<<<<<<<<<<<<<<<LFY         --------->ANAC46                        <------MYB46(1)     <---------ZAT18               --------->ANAC58        <------ZmHOX2a(2)                 <-------     --------->ZAT18           ===================================HOX2a_HOX2a                -------- ------ANAC55(2)               <------ZmHOX2a(1)           --------->CCA1(2)                 -------- -->ARR14(2)               ---------->DOF2                --------->AGP1   <------MYB83      -------- --------->DOF2         --------->ANAC58        <-----------------AGL3    <---------TOE1(2)  -------- ---ARR14(2)            --------->ANAC58   <-----------RAV1(1)     --------->ATHB12    --------->AHL20(2)   cttaaagggcacaatggattcaagcgaagcaaaggacacaccatcttgtggctgtatatagatccaagttgatttgtaggtttttgaaaaaaaatacgaa  17058600                                                                                --------->At4g35610 <                                                                                ----------->RAV1(2)--                      <---------AHL20(2)                                --------->YAB1--------->ANAC58                      --------->AHL20(2)                                <---------ICU4--------->ANAC58 --ANAC55(2)       <---------AHL20(1)                    <---------ANAC46       ===================== ->ANAC58          --------->AHL20(1)                    <---------ANAC58  <---------ICU4        ---- ->ANAC58         --------->AHL20(2)                     <---------ANAC58  --------->YAB1 <---------ALFIN1 ->ANAC55(2)----------->GT1         ---------->DOF2      <---------AtLEC2 --------->ICU4  ----------- ->ANAC46   <---------ANAC46 <------ZmHOX2a(1)  <---------AtLEC2     --------->YAB1 ---------->DOF2==   attttgttttagttgtgtaaatatataaataggagtgccaaagagttttggcatgaattgcttggctacgaccataatcatcacctgcaagcccacattg  17058700  Previous    Next  AGI:  At2g40840.1    Description:  DPE2 (DISPROPORTIONATING ENZYME 2); 4-alpha-glucanotransferase/ heteroglycan binding. similar to DPE1 (DISPROPORTIONATING ENZYME), 4-alpha-glucanotransferase [Arabidopsis thaliana] (TAIR:AT5G64860.1); similar to hypothetical protein OsJ_024467 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40984.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18259.1); similar to 4-alpha-glucanotransferase; disproportionating enzyme [Solanum tuberosum] (GB:AAR99599.1); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784); contains InterPro domain Glycoside hydrolase, carbohydrate-binding; (InterPro:IPR002044); contains Range:  from: 17052041    to: 17058025    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g40850.1    Description:  phosphatidylinositol 3- and 4-kinase family protein. similar to inositol or phosphatidylinositol kinase [Arabidopsis thaliana] (TAIR:AT3G56600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18257.1); contains InterPro domain Phosphatidylinositol 3- and 4-kinase, catalytic; (InterPro:IPR000403) Range:  from: 17058201    to: 17060370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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