Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------TOE2(3)    <---------TOE1(3)                                <---------YAB1                               <-- ------>DAG2                                ---------->DOF2                                       --- ------>DOF2   --------->MYB46(3)    ----------->GT1<---------GLK1(2)       --------->TOE2(3) -------   aaagttgaggtttgtcaacaacttgctattttagtaatttagtaacaaaagaaagattattgtgagactattagtttaacttaaaactaaaaacagaatc  17039100   <---------YAB1                                         <-----------GT1      ---------->DOF2   --------->ICU4                                      <----------DOF2--------->ZAT18     --------->ATHB12 -------ANAC55(2)                                  <----------DOF2  <---------------------WRI1 ------>ANAC55(2)             <---------ARR14(2)<-----------GT1     <---------ZAT18      <---------YAB1 -->GLK1(2)               <---------LBD16      <-----------GT1      --------->ZAT18    <---------ZAT6   aagtgataatttgtccatgtctccctctctcggaaactgtggtttttttttatctttctttaactatttgtgcgcattgaacaaagtgagtgttattggg  17039200                                      <---------ARR14(2)                                      --------->ARR14(2)                                   <---------------AGL15                                   ------>MYB46(1)                                   --------------->AGL15                     --------->HSFB2a(2)                                  ----------------->AG                    --------->ARR14(2)                                  <-----------------AGL1               --------------->AGL15                                  <-----------------AG                 <---------------AGL15                                  ----------------->AGL2              ----------------->AGL1                                  <-----------------AGL2              <-----------------AGL2                                  ======================================================MADS_MADS                                  <-----------------AGL3              ----------------->AG ------>MYB83                                  ----------------->AGL3              <-----------------AGL1                                  ----------------->AGL1              ----------------->AGL2                                  =====================================================MADS_MADS                                <-----------GT1                       <-----------------AGL3             --------->YAB1 <---------DAG2                            ===============================          --------->TOE2(3) <----------DOF2                          <-----------GT1     <---------MYB59     <---------DAG2      <-----------GT1                  ---------->DOF2 <---------ARR14(2)  <------     <----------DOF2    <---------ATHB12             ---------->ID1 <-----------GT1   <-----------GT1   gttctcacttttccttcatagtccaaatcacttttttccaaatatggattgttttgtctccaaagtgatttttccatttctggtatatttaccaaattac  17039300                                                                                          -----------                                                                                        <-----------GT1                                                                                ------->MYC2                                                                                <-------MYC2                                                                                <-------MYC3                <---------DEAR3(1)                                              ------->MYC3             --------->ANAC58                                                  --------->ANAC58             ----------->HVH21              --------->TGA1a                    ======================             --------->ANAC58               --------->O2                       ----------->GT1        --------->ANAC58                    <---------TGA1a                    <---------ANAC55(2)        --------->ANAC46                    <---------O2                       --------->ANAC55(2)        --------->ANAC58               --------->ANAC46                        <---------TGA1a       --------->RAP2.6(3)             --------->ANAC58                        --------->ANAC58      --------->MYB52(1)               --------->ANAC58                        --------->TGA1a     <---------ARR14(2)                <----------ID1                          --------->O2      ----     --------->ARR14(2)          <---------AHL20(2)                         <---------ARR14(2)   <---   --------->LBD16               --------->AHL20(2)              <---------TOE2(3)   <---------ICU4 =========================================================================MADS_MADS --------->ICU4 -----GT1   --------->SPL7--------->HSFB2a(2)             --------------->AGL15<---------O2     <----   taatccgaaaacggcacgacggtgtcttccagcatttaaaaacgacacgagggtctatctccaagttaagaaaacgcagacacgtgaatattaccagatg  17039400                          <---------ALFIN1                         <---------ZAT18                        --------->PCF5                       ------>NtERF2                       <---------ATERF1(1)                       <------NtERF2                       <---------PCF5                       --------->PCF2                      <---------RAP2.3(1)                      ------>NtERF2                      <---------ERF1                      --------->RAP2.6(2)                      <---------ATERF1(1)                      <-----------TCP11(1)                     <---------DEAR3(1)                     <---------ANAC58                     <---------ANAC58                     --------->ATERF1(2)           <------------CBF                     <---------ATERF1(2)          --------->ATHB51                     <---------RAP2.6(2)          <---------ICU4     ------>MYB46(1)                     <---------RAP2.3(2)          -------->ATHB1     ------>MYB83                     <---------RAP2.3(3)         <---------ATHB51  ------->GAMYB                    --------->ATERF1(1)          --------->ICU4    --------->DREB2C(2)                    --------->RAP2.6(3)          <---------YAB1    --------->DEAR3(1)                    <------NtERF2     --------->AHL20(1)          --------->DEAR3(2)    ---------->DOF2<---------ATERF1(1)--------->AHL20(2)          --------->MYB46(3)      --------->AHL20(2) ------>AGL1     <---------ANAC58     <---------AHL20(2)          <---------MYB55(2) --------->AHL20(2) ==============bZIP_DOF--------->ATERF1(1)    ------------>ATHB5 -------->P        ----------->GT1 ------->GT1     <---------ANAC58     <---------AHL20(1)         ------>MYB83     --------->DAG2 ------ANAC46   --------->At4g35610  --------->AHL20(2)          ------>MYB46(1) ---------->DOF2----- -----MYB46(3)  --------->ZAT2     --------->TOE2(3)        <-----------GT1    --------->LBD16<------   ggtgaataaagacccaatagctggcggcccacttgtacattaaattagcccattattgtttttttccaaccgactaaattccgaaaagtaaattaaaccg  17039500                 ----------->GT1    <---------AHL20(2)    --------->AHL20(2)   --------->AHL20(2)            <-------TEIL                                   --------->ALFIN1    <   <---------AHL20(2)            --------->ZAT14                              <---------ANAC58      < --------->GLK1(2)         --------->MYB52(1)                                 <---------ANAC46      - ---->LBD16     ----------->GT1  <---------ZAT14                    <---------LBD16    --------->ATHB12 ---LBD16  ---------->DOF2 -------->P     *TSS --------->ICU4--------->ANAC46 <---------ANAC58      -   gagaatttaatttgaaagaagataaaacttaccggtacagagagaagtcattttgagaaaaatcagcaactctggagagagcgtgttcgtcattgaaatc  17039600                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          --------->GLK1(2)          XXXXXXXXXXXXXXXXXXXX>MIR870              <---------MYB46(3)          <-------TEIL                             <---------DEAR3(2)                         <------ZmHOX2a(2)         --------->GLK1(2)                        <---------At1g77200                        <------- ---------ZAT2              <---------ANAC58      <---------DEAR3(1)                         -------- ---------HSFC1(2)          <---------ANAC46   <---------ANAC46                <---------ATHB12  ---- -------->HSFC1(2)          <---------ANAC58   <---------ANAC58  --------->MYB52(2)         --------- -------->ZAT2            ------>ZmHOX2a(2)    <---------ANAC58<---------MYB52(1)        ---------->DOF2   gaagcttggagattcaatatttcttcgatctcgtgttcttcgtctcgtttcgtcggtgagaatccgttagtctccttgccaatgtttgaatcaaagatca  17039700                                                ----------->GT1                               ------>ZmHOX2a(1)                                 --------->ARR11(3)                                       <---------ARR14(2)                                 <---------ARR11(3)                                   --------->ANAC58 <---------AHL20(2)    <---------YAB1           <---------ZAT6                        --------->ANAC46 --ARR11(3)          --------->YAB1  <-----------HVH21                                --------->ANAC58 ->ARR11(3)          --------->TOE2(3)      <-------TEIL                       <---------ARR14(2) ------->GT1        <---------YAB1 ------>ZmHOX2a(2)   --------->AHL20(2)      --------->ARR14(2) --- >YAB1             <---------TOE2(3)<----------DOF2    --------->YAB1<---------At4g35610  --------->ARR14(2)   tgtataattttcttcgatttttatgttaattgtttgatctttcaggtccagtgttaataaaaaatgagttcaactgtttcaaatccccaaggaatcctgc  17039800                            --------->GLK1(2)                        --------->YAB1                      --------->GLK1(2)                   --------->LBD16                  <---------HSFB2a(2)                  --------->HSFB2a(2)                  --------->HSFC1(1)                                          --------->ARR14(2)                 ----------------->AGL1        --------->At4g35610           <------ZmHOX2a(1) <-----             <---------At4g35610      ---------->DOF2  --------->MYB52(2) --------->YAB1       ------             --------->At4g35610  --------->YAB1   <---------ZAT6<-----------RAV1(1)           <-----     <-------TEIL----------------->AGL2        <---------At4g35610<-------GAMYB                ------ ----->P --------->ARR14(2)<---------GLK1(2)<------ZmHOX2a(1)    --------->ALFIN1              ------   aaccaggctcatttctgcttccagaatcagaatctatgaaaaaagaggaagcagagttagtttctgtgtgttggaatcaggattcaagttgttttgcagc  17039900                                                                     <---------DEAR3(1)                                                                    <---------ORA47(1)                                                               --------->MYB52(1)                                                            --------->At4g35610                                                            <---------At4g35610                                                        <-----------HVH21                                                       <---------ANAC58                                                       <---------TGA1a                                                       --------->TGA1a                                                       <---------ANAC46                                                       ===================bZIP_DOF                  -                                                   <-----------RAV1(2)                              <                                                 <-----------HVH21 <------ZmHOX2a(1)                < ----ZAT2                                       <----------DOF2---------->DOF2                     <- ----->RAV1(2)               <---------------------WRI1===================bZIP_DOF             <----- ----At4g35610  <---------ANAC58        ---------->DOF2<---------ANAC58 <---------AtMYB61      <----- --->At4g35610  <---------ANAC46        =========================bZIP_DOF                     <------ --->ZAT2       <---------ANAC58 ------->TEIL   =================bZIP_DOF<---------MYB46(3)   <------   tggaacgagtcatggttttcgtatatataactgtgaacctttcaaagaaactttcaggcgtgagctaaaggacggtggttttaaaatcgtagagatgctt  17040000  Previous    Next  AGI:  At2g40810.1    Description:  AtATG18c (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) c). similar to AtATG18d (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) d) [Arabidopsis thaliana] (TAIR:AT3G56440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41323.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 17039542    to: 17041678    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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