Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                 <---                                                                                                <----                                                                                             ------>ZmHOX2a(1)                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                        --------->GLK1(1)                                              --------->GLK1(2)                         <---------GLK1(1)                                            <---------HSFB2a(1)                        --------->ARR11(3)                                            --------->HSFB2a(1)                        --------->ARR14(2)                                            --------->HSFC1(2)                         <---------ARR11(3)                                       <---------HSFB2a(2)                             <---------ARR14(3)                                       --------->HSFB2a(2)  --------->DAG2             --------->ARR14(3)                                       --------->LBD16     ---------->DOF2             <-----------ARR10                                 --------->GLK1(2) --------->ARR11(3)                  <---------ARR14(2)                                <---------GLK1(2)  <---------ARR11(3)--------->ICU4   <------ZmHOX2a(1)                            ---------->DOF2 <---------HSFC1(2)  ----------->GT1       <---------GLK1(2) ------>At4g35610 --------->ARR11(3) <---------LBD16 ------>ZmHOX2a(2)             <---------LBD16<--   agttgaattcgttttgaaaacatctacatataaagattctacgggaaaattctgatcttgaaaaagttgtaattcttcatcaaactcaggatctccttcg  17015600                                                                                                 <---                                                                                                -----    --------->REM1(1)                                                                           ----- --------MYB46(3)                                                     --------->ATHB12          <---- ----GAMYB                                                         ------>NtERF2               ------ -----MYB46(3)          ---------->ID1                            ----------->HVH21         --------- ------P--------->TOE2(3)                                   --------->CCA1(2)    <-------------------   gttgctacaacctttgtttcatgtttctcgttttcatttgtccaagcttcaaccttgtattgatatgggcgaccattggtgactccgattgtaccaaaga  17015700                                      <----------DOF2                                   <-----------GT1     --------->ANAC46              --------->ARR11(3) ------RVE1(1)                     <---------ARR11(3) ---->ARR14(2)                   <---------YAB1 ---->ARR11(3)                 <---------ICU4                                                   ----- -----ARR11(3)                <---------YAB1          <-----------GT1   <---------AHL20(2)     <----- --->YAB1              ----------->RAV1(2)     --------->ANAC58      --------->YAB1    --------->AHL20(2) ->DOF2                <---------At4g35610<-----------GT1   <----------DOF2         --------->YAB1<-- --WRI1  --------->At4g35610  --------->ICU4   --------->ANAC58     --------->AHL20(2) --------->YAB1   tattcacaagtagcttcacatcttcacctgtgattattatctttttccctcgcatttttcttcttttcaaataataaatctgagtagaataatatgtgtg  17015800                                                                                              <------                                                                                            <<<<<<<<<MYB98                                                                                          <---------YAB1                                                                                         <---------TOE2(3)                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)                          --------->MYB46(3)                                       <---------AHL20(1)                     --------->TOE2(3)                       --------->ANAC46      --------->AHL20(2)                     --------->AtMYB61                       --------->ANAC58      --------->AHL20(1)                    --------->ANAC46                         --------->ANAC55(2)   --------->ARR11(3) ---->ATHB12      <---------ALFIN1                 --------->ZAT6                  <---------ARR11(3) ----YAB1    <-----------GT1          ---------->ID1         --------->ANAC58     --------->AHL20(2) -------WOX13(1)  --------->REM1(1)   <---------TOE2(3)    <-----------GT1    --------------->AGL15   attgatatgtcaacttaactacacctcaacaattgtttttgtggttttttctctcactaattcacgaaattcgacattttctaaatatatttatgttaaa  17015900   ------->MYC4   ------->MYC3   <-------MYC2   ------->MYC2   <-------PIF5                                                                          --------->AHL20(2)   ------->PIF5                                                                          <---------AHL20(2)   <-------MYC4                                                                  --------->YAB1   ------->PIF4                                                                  ----------->GT1   <-------MYC3                                                      <-----------RAV1(1) --------->AHL20(1)   <-------PIF4                     ----------->GT1                 <---------TOE2(3)   --------->AHL20(2)  --------->ANAC55(2) <----------DOF2   --------->AHL20(2)       --------->AHL20(2) --------->YAB1 ------->TEIL      --------->ICU4   --------->ANAC58             <---------AHL20(2) --------->AHL20(2) ---AHL20(2)  ----------->GT1       --------->ANAC58       --------->YAB1 <---------ANAC46     *TSS   atgcacgtgtttcatgttgtaattctttgtttataaacaagaaaaaatagatgctaaacaatgagaaataaatgttgtttgaataataaaaaaaattgaa  17016000                                                                   --------->ARR11(3)                                                                   <---------ARR11(3)           <----                                       --------->YAB1             --------->CCA1(1)            <-----                                      <---------YAB1           <---------AHL20(2)              ------                                     --------->ARR11(3)       --------->AHL20(2)              -------                                     <---------ARR11(3) <-----------GT1                      <-------       <-----------GT1          --------->AHL20(2)   <---------AHL20(2)              --------->TOE2(3)  --------->TOE2(3)        ------------>CBF         --------->AHL20(2)            <---------GLK1(2)   tgtttcttaataccatttcaaatactaaaaacaatgaaatatcatatttagagatttatttctatataatatctattttggtcatattcttagttatgat  17016100                                                                       <-------GAMYB                                                            <---------RVE1(1)                                                            <---------CCA1(1)                    <---                       --------->TOE2(3)                   --------->ARR11(3)                    <---                       ------->GAMYB                       <---------AHL20(1)                    <--- -----YAB1           -------->P----------->GT1             --------->AHL20(1)           --------->ARR11(3) ----ARR11(3)       ------>MYB83                           <---------ARR11(3)           --------->AHL20(1) --->ARR11(3)       ------>MYB46(1)                      ----------->ARR10              <---------AHL20(1) -->YAB1          --------->AtMYB61           <---------AHL20(2)<---------AHL20(2)      <---------ARR11(3) --YAB1           <---------MYB59           <---------AHL20(2) --------->AHL20(2)  --------->AHL20(2)   atttgactactattcaaaaacctaaccccaatatagtcaaaactatataaaaatgcagtaagatattaaatgctgttgaacaaaattcaatatcttatgg  17016200                                                                                 <---------MYB59                                                                                 <---------MYB111(1)                                                                                --------->ANAC55(2)                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)  <xxxxxx                                                           <---------AHL20(2)   <---------ANAC55(2)                                                     --------->YAB1       <---------AHL20(2)xxxxxxxxx ---------->DOF2                  ----------->GT1 --------->YAB1   --------->ANAC58       --------->HSFC1(2) ------ANAC46                  <---------AtLEC2--------->YAB1      ----------->GT1        <---------HSFC1(2) ------ANAC58        <----------ID1            <------ZmHOX2a(1)   --------->ANAC58------>MYB46(1) ------ANAC58  <---------YAB1 <-------TEIL   --------->MYB59     --------->MYB52(1)------>MYB83   cttgaaagtaaactagtaagatagctacaaaatgcatggtaagaagttaggataatcatattttaagaaacgaaaataaaatacctaatataagcttcga  17016300                                                               --------->GLK1(1)                               <---------ARR14(2)              <---------GLK1(1)                      <---------ARR11(3)                       --------->CCA1(2)                      --------->ARR11(3)                       <----------TaMYB80                     <---------GLK1(1)                        <---------ARR14(2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                --------->ARR14(2)            <--------         <----------DOF2       --------->KAN4(2)            ----------->GT1                 ---------     <---------At4g35610      <----------TaMYB80<---------YAB1---------->TaMYB80          --------->ATHB12  ---------->DOF2--------->HSFB2a(2)           --------->AHL20(2)                     --------->ATHB12  <-------TEIL   <---------HSFB2a(2)--------->LBD16<---------YAB1                  <---------AtLEC2 - xxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ARR14(2)<---------AHL20(2)          --------->ATHB12    ---- xxxxxxx>smallRNA(i) --------->GLK1(1)    <-------TEIL   <------ZmHOX2a(1)  <-------TEIL<---------WOX13(1)   cacatacagctctttcttactggaaatcttgcatattccgaacatacatttttattttaggacggatatacctatagattcatttgcaagattgatttcc  17016400                    >>>>>>>>>GATA-2           --------->KAN4(2)  ------>ZmHOX2a(1)                    >>>>>>>>>GATA-3         <XXXXXXXXXXXXXXXXXXXMIR156G                    >>>>>>>>>GATA-4  <----------DOF2            --------->TOE2(3) -GLK1(1)           <---------ARR14(2)      <XXXXXXXXXXXXXXXXXXXMIR156A-F   --------->ZAT18        -- >GLK1(1)           >>>>>>>>>GATA-1  <---------DAG2            ----------------->AGL1         <------ ---------->GT1  <---------ANAC46---------->ID1                ----------------->AG           ------- -->ZmHOX2a(1) <---------ANAC46<-----------RAV1(1)  <----------DOF2        <-----------HVH21 --------   tattgaaaaaaaacatgttgtggattcaaatatttgtcgctttttgttcattctcttttgtaatttcctaaacgagaggtcactaatccaaaaatcgtta  17016500  Previous    Next  AGI:  At2g40745.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39975.1); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 17015252    to: 17015995    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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