Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                               <-----                                                                                               ------                                             <---------DAG2                 <---------AHL20(2) <-----      --------->AHL20(2)                  <-----------GT1                   --------->AHL20(2) ------      <---------AHL20(2)          --------->ANAC55(2)         --------->MYB52(1)      --------->TOE2(3)     --------->AHL20(2)         <-----------GT1           --------->ZAT6----------->GT1       -------     <---------AHL20(2)    <---------AHL20(2)<----------DOF2  ---------->DOF2    --------->ATHB12   -   tcaacaattaaattcgatatatatgttatttttttcacttgatattacttttttcccataagactaaaggaagactgataaattgatttcttaaaatttt  16947500                                                                     -------->HAHB4                                                                     <---------ICU4                                                                     --------->YAB1                                                                    --------->ICU4                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                       <---------ANAC46            ------>MYB83                               <---------ANAC58 --------->YAB1 ---------AHL20(2)                                     <---------ANAC58<---------YAB1 ----AHL20(2)                              <---------TOE2(3)    --------->AHL20(2) --->AHL20(2)         --------->YAB1  ------>MYB83<----------DOF2<---------YAB1 ----AHL20(1)    --------->MYB46(3) --------------->AGL15     <---------YAB1 --->AHL20(1)<---------MYB52(2)  <-----------GT1  <---------DAG2<---------AHL20(2) -->AHL20(2)------>MYB46(1)   --------->YAB1  <-----------GT1<---------AHL20(2)    --------->YAB1  <- -------->AHL20(2)   <---------ATHB12 ------>MYB46(1) ---------->ID1<---------ATHB51        ---------   atttaaatgaaaccaaataaccaataatccaatattcaccaaattaagtttcctttttcgtattattttaattatgatagcttaatgatatcaattgtta  16947600      <---------AHL20(2)                                <----------ID1      --------->AHL20(2)                              ---------->DOF2                   ----------->GT1  <---------AHL20(2)                               <<<<<<<<<MYB98        <---------YAB1<---------TOE1(3) <---------YAB1        ----------->GT1           <---------YAB1         <---------AHL20(2)     <----- --------ICU4       --------->MYB52(1)           ----------->GT1       --------->YAB1  <---------TOE2(3) -->GT1        ------>ZmHOX2a(1)            <------ZmHOX2a(1)         <---------YAB1 ---------->DOF2   atttttatttaaatttcctatcaaacggataaaagattacgaagtaggattatgttaaaagacaaattgaagattataatggatttttaaaggttataag  16947700                                                                   --------->ARR11(3)                  --------->ARR11(3)                               <---------GLK1(2)                  --------->ARR11(1)                               <---------ARR11(3)                <---------TOE2(3)                              ---------->DOF2       ------>ZmHOX2a(1)    ----------->GT1--------->CCA1(2)                          --------->AHL20(2)  ---------->ID1  <----------DOF2 <---------ARR14(2)                     --------->AHL20(2)      <-----------GT1 ----TOE2(3)    <---------TOE1(3)    --------->ICU4    <---------TOE2(3)      <---------DAG2   attactttgttaatatttaagatttggggacaatttggaatatttagtatttgttttaagaaaataaaagattttggccaatttttcctaatgtcaattt  16947800                                                                             <---------MYB52(1)                                                                            <---------RAP2.6(3)                                                                       --------->MYB46(3)                                                                       --------->AtMYB61                                                                     ------>MYB46(1)                                                                     -------->P                                                                     --------->MYB52(1)                                                                     ------>MYB83  --------->DAG2                                                                    --------->ANAC46                                                                   --------->MYB46(3)                               <---------ETT(2)                 <-----------GT1   ---------->DOF2                          <---------ANAC58                  --------->YAB1  ----------->GT1                          <---------ANAC58                 <---------YAB1  ----------->GT1                    --------->GLK1(2)                      --------->ICU4------>MYB46(1)           --------->LBD16<---------ANAC46               --------->YAB1<---------MYB55(2)         --------->DEAR3(2)  --------->REM1(2)         --------->AHL20(2)------>MYB83               -       <-----------GT1 <----------DOF2              --------->AHL20(2) <---------ALFIN1 ----------->GT1 <---------YAB1   <---------AHL20(2)                <---------AHL20(2)--------->ZAT2  ----------->GT1   agtatttttgtaccggctaaataatctttcgtgtagacaaaaatcaactctgaataaaataataataaacccaccagccgttaaaaaagggtgaaaaaca  16947900                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                                --------->GLK1(1)                                                                <---------GLK1(1)                                                               <-----------ARR10                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                             --------->DEAR3(1)             ------>ZmHOX2a(1)                             --------->LBD16             *TSS                                          <---------At4g35610             <<<<<<<<<TBF1         --------->ARR14(2)                                ------>NtERF2                <<<<<<<<<TBF1         <---------ARR14(2)                               --------->DEAR3(1) <----------DOF2   <---------PCF2                     ------>ZmHOX2a(1)  <---------LBD16 <---------At4g35610  <<<<<<<   --------->TCP20                    =================================HOX2a_HOX2a<<<<<<<<<TBF1 -------->ALFIN1                      ==================================HOX2a_HOX2a  <<<<<<<<<TBF1   tagtggagccctatccttctctctctctctcgtagccctcctctgttccatcttcttgctccgccgatctccctctgctctttcttcttcttcttcttct  16948000                          <-----------GT1                    <----------DOF2                 <-----------GT1                                                      <---------GLK1(2)              <---------AHL20(2)                                               --------->LBD16              --------->AHL20(2)                                              --------------------->WRI1             <---------AHL20(2)                                          --------->ARR11(3) <<TBF1   <---------AHL20(2)                           --------->AHL20(2)<---------ARR11(3)      ----   tcaattctgtttttatttatttctttataaaccttctctcttaaaacccaaattcaaaaaaatcaaacgaagaaaaatctccgagttagaatcgtccata  16948100                                                                  <---------ICU4                    -                                                       --------->At4g35610                          -                                                     --------->YAB1 <---------YAB1            <------                                           <---------ANAC58       --------->YAB1              -------                                           <---------ANAC58      --------->ICU4               -------                                          <---------MYB46(3)     <---------ATHB12             <------ ----->GLK1(2)                      <<<<<<<<<<<<<<<<<LFY ---------->DOF2          ----------->GT1   -   atcttgagactaagtgagaaatagtatccaaggtgatcaaacaatgggtgcaaaatcagaagagccgatgatgacaacaagagatagtatatacagagct  16948200                                                                                        <----------DOF2                                                                                =====================                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2) -------->ANAC58                                                               --------->GLK1(1) -------->ANAC58                                                               ====================== ---ZAT2                                                                       <---------GLK1(1) -->ZAT2    <----------ID1                                                    <---------ARR14(3) -->At4g35610                       ------->GAMYB                             --------->ARR11(3) ---At4g35610           ------->GAMYB                                         <---------ARR11(3) -------->ANAC46     ----------->RAV1(1)            -------->P            --------->ANAC46  ---------   gcaaggaatataaaacgacgagacaacagtctctacaacgctcttcgatctatctaccaagactccatcttcgtccacgagatctctctgctttggccta  16948300                    --------->MYB52(2)                                                      ---------                 --------->TOE1(2)                     <---------ALFIN1                     <--------ATHB1                 --------->TOE2(2)                   ------>NtERF2                          <--------                 --------->TOE2(3)                  --------->ANAC58                        <--------                <---------HSFB2a(1)                 --------->ANAC46                        ---------    ------>ZmHOX2a(1)                               --------->bZIP60(1)                    --------->ICU4 ==========HOX2a_HOX2a                              --------->ANAC58  <---------ARR14(2)   <---------ATHB12 ==========HOX2a_HOX2a   <---------AtMYB61          --------->bZIP60(2)       <---------MYB52(1)  --- ->ID1          --------->HSFB2a(1)        ---------->DOF2            --------->ARR14(2)   <---------ATHB51   aacttcctctcgttgcaaaccttcgttgtggtctctggtactctgaaaagttcgacgccacttgctacttcaaatccaccgatggtcataccaataattt  16948400  Previous    Next  AGI:  At2g40570.1    Description:  initiator tRNA phosphoribosyl transferase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO65450.1); contains InterPro domain tRNA A64-2' (InterPro:IPR016519); contains InterPro domain Initiator tRNA phosphoribosyl transferase; (InterPro:IPR007306) Range:  from: 16947913    to: 16950570    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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