Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ICU4                                       --------->YAB1         <------MYB46(1)           <---------ANAC58         ----------->GT1           <---------ANAC46                                            <-----         <------MYB83              <---------ANAC58                                    <-----------GT1      <---------MYB52(1)      --------->MYB52(2)<---------AHL20(2)                ----------->GT1 <----------DOF2<-----------GT1   --------->MYB52(2)<-----------GT1        <----------DOF2 <--------- --ZAT6 --------->MYB59       <---------MYB46(3)--------->AHL20(2)    <---------AHL20(2)  <---------DAG2   atactttagttaggtttattactcgagtttgtttgttacttgcataacaaaaaattactcttaagtcagtattttttctttgaaaggttttaccttttta  16925100                                                                                                -----                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                          <---------AHL20(1)                                                                                          --------->AHL20(2)                                                                                          --------->AHL20(1)                                                                                  <---------ARR14(3)                                                                                  --------->ARR14(3)                                                                                  --------->ARR14(2)                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                           ------>ZmHOX2a(1)                                      <---------ARR14(2)                     <---------ALFIN1                                             <-----------ARR10 <---------ZAT6      --------->ZAT6                                              --------->CCA1(1) ------GT1--------->At4g35610                     <---------AHL20(2)  <---------AHL20(2) <---------CCA1(2) -DOF2    <---------At4g35610      <---------AHL20(2)         ------>ZmHOX2a(1)  --------->RVE1(1) <-   ccagtgtgaatgtgctgagttcaacactccttcatgtttaatctgagtatattttatattagtcctgcatattttatcggagaatatcttcatatattat  16925200      --------->ZAT14      <---------ZAT14      --------->ZAT18      <---------ZAT18                           --------->AHL20(2)    --------------->AtSPL8                      <---------AHL20(2)    <---------------AtSPL8                      <--------ATHB1 ---->ICU4                                      --------->ATHB51        <-----------RAV1(1) -----YAB1                 --------->ZAT6       <---------ICU4      --------->ARR11(3) --AHL20(2)         <---------TOE1(3)          --------->ICU4 <---------MYB46(3) ->AHL20(2)         <---------TOE2(3)          <---------ATHB51 <---------MYB52(1) --YAB1     --------->AHL20(2)                 <---------ATHB12<-------GAMYB     --------->AHL20(2) --------YAB1<---------AHL20(2)    <-----------GT1  <-----------GT1 <---------GLK1(2) --------->MYB52(1)   tattagagtgtacataaaattcaaggtttactctatattactctatccaataatttacatttgtctgttagattttgttggaaaaaaataactgtgattt  16925300                                  ------------------------>ANAC81                                ---------->DOF2                              <---------YAB1                                  <---------DAG2                          <---------WOX13(1)                  --------->HSFB2a(2)                       <---------AHL20(2)                     --------->HSFC1(1)                -----                       <---------YAB1    ---------->DOF2      <---------HSFC1(1)               ------         <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)      >>>>>>>>>TBF1 <---------HSFB2a(2)       --------->ICU4   acataagttttttttttttttttttttaattgatgaaagaagaaaaagaagaagaaagtcttctctagaaacaaaatccaatttttggtcagaatgaaaa  16925400                                                                                                   <-                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                      ===============                                                 --------->ZAT18                      <------ZmHOX2a(2)                    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                --------->ARR11(3)                 --------->AHL20(2)              <---------ZAT18                     <---------ARR11(3)                 <---------AHL20(2)           --------->ANAC58                   --------->YAB1 =====         --------->ICU4                       --------->ANAC58                   ---------->DOF2===== ---->DAG2      --------->AHL20(2)    ---------->DOF2                   ----------->GT1  --------->ZAT2 ---->DOF2     <---------YAB1    --------->AHL20(2)          ---------->DOF2------------>CBF    -----   agtcactggcaatgtttattaaaaaaaaaaaaaaaaaaaataaagcccaagcccactacatgttaaagcccaagaagtaacaataaagatcagctctcct  16925500                                     --------->ARR14(2)                                     <---------ARR14(2)           *TSS           ----------->RAV1(1) --------->YAB1       ------>ZmHOX2a(2)                --------->ANAC46          <---------------AtSPL8 ----------HVH21     <------ZmHOX2a(2)               --------->ANAC46     --------->ANAC58 ==HOX2a_HOX2a      --------->ARR14(2)          <---------At4g35610       --------->ANAC58 ===========================HOX2a_HOX2a         --------->At4g35610   <---------HSFB2a(2) ============================HOX2a_HOX2a        --------->ZAT2   <-------TEIL    --------------->AtSPL8 ->ZmHOX2a(1)       <---------ARR14(2)         ----------->RAV1(1)    --------->HSFB2a(2)      <-----   ctatcagagattagacgaatgagatcggcaacaagagcgtaaaccctagcagcagacacaacacgagttcatcgagaagcaagatggtactcattttctt  16925600                       ---------->DOF2                                                            ---              --------->GLK1(1)                                                                   ---              --------->CCA1(2)                        <---------ANAC58                      <------ZmHOX2a(1)             --------->ARR14(2)          <---------ARR11(3)                             --------->MYB55(2)             <---------GLK1(2)           --------->ARR11(3)<-----------RAV1(1)          <---------MYB46(3)             <---------ARR14(2)        <---------YAB1  <---------ANAC46           --------->MYB52(1)-   <---------YAB1     --------->AHL20(2)--------->YAB1 <---------ANAC58 ---------->DOF2xxxxxxxxxxxxxx -----DOF2--------->YAB1    --------->CCA1(2)>>>>>>>>>>>>>>>>>LFY    <----------DOF2   --------->ALFIN1   tgattttgattatcagatttgcaataaaagatagagaattgatgatcatccattgttgtttgtgttgcagactttcaagcgaaggaacggtgggaggaac  16925700                 <---------WRKY12               <-----------HVH21              --------->ANAC46              <---------TGA1a              <---------ANAC55(2)              --------->bZIP60(2)              --------->TGA1a              --------->ANAC55(1)              --------->ANAC58              --------->O2             <-----------STF1<---------GLK1(2)          <------ZmHOX2a(1) <---------At4g35610      ==================MYC_MYB      ------->GAMYB         --------->At4g35610   --------->MYB52(1)------->GAMYB   ----------->RAV1(1)   <---------ATHB12                              <-----------GT1       -------- ------>ANAC58<---------O2--------->YAB1                  --------->ANAC58                 <---------ATHB12 ------>ANAC58--------->ANAC58                          <---------ALFIN1               <---------ATHB12 -------->YAB1===============MYC_MYB   <-----------RAV1(1)--------->ANAC58<---------DAG2 --------->WOX13(1) xxxxxxxx>smallRNA(fl3)--------->WOX13(1)       <-----------RAV1(1) <----------DOF2  --------->WOX13(1)   aagcacaacagaggacacgtcaacccaatcagatgctccaactgtggcaaatgttgccccaaggtactctctttcaccttctcttctcaatcaatcaatc  16925800                                                --------->AHL20(2)                                                <---------AHL20(2)                                                --------->ATHB51                                                <--------ATHB1                                                <---------ICU4                                            <---------YAB1                                 <---------AtMYB61                                 <-----------RAV1(1)                             ------>ZmHOX2a(2) <---------YAB1                           --------->ARR11(3)  --------->ICU4                     --------->ATHB12<---------MYB46(3)     --------->ICU4 <---------YAB1  <---------AtMYB61       <------ZmHOX2a(1)            <------ZmHOX2a(1) ->WOX13(1)<---------ANAC46<---------ARR11(3)--------->YAB1<----------ID1      <-------TEIL   tccagtaattcttatgtgtattttgatttgatcttgtggtggttctataataatttgggataggacaaggccattaagaggttcattgtgaggaacattg  16925900        <---------At4g35610       <---------ANAC58     --------->ATERF1(1)          <---------ANAC58                                       --------->ICU4    <---------ATERF1(1)           <---------ANAC46                                       <---------YAB1  <-----------RAV1(2)        <---------At4g35610                             --------->WRKY12  --------->ATERF1(1)        --------->At4g35610                             ----------->HVH21 <---------At4g35610      <------ZmHOX2a(1)                                <----------DOF2 --------->At4g35610   <---------LBD16                               <---------YAB1    --------->YAB1 --------->ZAT2   <---------ARR11(3)                        ------>ZmHOX2a(1)--------->WRKY38(1) <---------ZAT2   --------->ARR11(3)            <---------YAB1  <----------DOF2   <----------DOF2   tggagcaggctgctattagagatgttcaggaagctagcgtctatgagggtatcatttcattcctctcttttatgtttctttgacctttgttataattcta  16926000  Previous    Next  AGI:  At2g40510.1    Description:  40S ribosomal protein S26 (RPS26A). Identical to 40S ribosomal protein S26-2 (RPS26B) [Arabidopsis Thaliana] (GB:Q8LPJ7;GB:O22884); similar to 40S ribosomal protein S26 (RPS26B) [Arabidopsis thaliana] (TAIR:AT2G40590.1); similar to ribosomal protein S26 [Pisum sativum] (GB:AAD47346.1); contains InterPro domain Ribosomal protein S26e; (InterPro:IPR000892) Range:  from: 16925511    to: 16926966    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version