Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------            ------->TEIL                                                                  ===========    <----------DOF2          <---------DAG2                                       <---------CCA1(2) <-----------GT1          <-----------GT1                               --------->ATHB12  =========== ------DOF2<---------CCA1(2) <----------DOF2        --------->TOE2(3)   --------->ATHB51  ------>ZmHOX2a(1) --DOF2<---------ANAC46----------->GT1  <---------TOE2(3)              <---------YAB1    --------->TOE2(3)   tttttactttggtgtatctatgaacgagttacttttccgattaatgtattcatacatcaaacagtatgggcttattattggcccataacttcctaaaaga  16917000                                          <---------ZAT18                                        --------->At4g35610                                ------->GAMYB                                --------->DEAR3(1)                               --------->DEAR3(2)                           <------ZmHOX2a(2)                     <---------LBD16    <------NtERF2                     --------->LBD16    <---------At4g35610                    <---------ANAC58   <---------ATERF1(1)                    <---------ANAC46  <---------DEAR3(1)                    <---------ANAC58 --------->At4g35610                   <-------TEIL--------->MYB46(3)                            --------->ANAC58                   ------>ZmHOX2a(2) --------->ATERF1(1)                     --------->ANAC58                  --------->CCA1(2)  <---------At4g35610                --------->ANAC58                 --------->ARR11(3) ------>NtERF2                       --------->ANAC58                 <---------ARR14(2) <---------ATERF1(1)           <------MYB46(1)                 <---------ARR11(3)<---------DEAR3(1)           <---------WOX13(1)                 --------->ARR14(2)<---------ATERF1(2)        --------->ATHB12                --------->RVE1(1)<-----------HVH21          <---------WOX13(1)   ----------->GT1<------ZmHOX2a(2)--------->ATERF1(2)    --------->ATHB12  ------>NtERF2   <-------- ->DOF2      ---------->DOF2--------->MYB46(3)      <------NtERF2 <------MYB83   ---------->DOF2 =========================HOX2a_HOX2a<------NtERF2<---------DEAR3(1)    --------->ANAC46   <---------DAG2 ========================HOX2a_HOX2a<---------DEAR3(2)   <---------YAB1 --------->AtLEC2 ------>NtERF2   aaacatcgtgaaaacaaaagatccgtgggatcaaccgtcggcagcgcaaacgtcgtcgtttgattgattggtccatgccaccctaaatccctgccttttt  16917100                                                   ----------------->AGL1                                                   ----------------->AGL2                                               --------->ANAC46                                              --------->At4g35610                                             --------->MYB52(1)                                            <---------WRKY38(1)                                           <---------ATHB12                                           --------->MYB46(3)                                          --------->ANAC58                                          --------->ANAC58                 ------>MYB46(1)                                       <------NtERF2                       ------>MYB83                                       --------->LBD16                   ------->GAMYB                                      --------->ANAC46                   --------->AtMYB61                                      --------->ANAC58                  --------->MYB46(3)                                      --------->ANAC58                --------->WOX13(1)                                     <---------LBD16                 <---------WRKY38(1)   --------->ANAC58                  --------->ZAT18                 <---------WRKY12   --------->ANAC58             <---------ATHB12------->GAMYB       --------->WRKY18(1) ---------->DOF2        <---------GLK1(1)--------->WOX13(1)     <---------ATHB12 --DOF2   --------->ANAC46      ---------->DOF2--------->MYB46(3) --------->WOX13(1)               --   tgcaaaagctacacagaagaaactgcaattcccaataagcccgcaatcaacggcccaaatcgagtaatcagtcaaccatcccatacaaccgttctcacat  16917200                                           <---------ICU4   <---------TGA1a                                          <---------YAB1    --------->bZIP60(1)                                          --------->ICU4    --------->ANAC46                                        --------->YAB1      --------->ANAC55(2)                                       <---------ATHB12     <---------bZIP60(1)                                   --------->MYB46(3)       --------->O2                                   <---------MYB55(2)       <---------O2                                   <---------ATHB12         <---------ANAC55(2)                                  -------->P         <-----------HVH21                                  --------->ANAC58  --------->ANAC55(1)                                  --------->ANAC58  --------->bZIP60(1)                                  ====================================MYC_MYB                                  ============================MYC_MYB                                  ------>MYB83      <---------O2                                --------->AtMYB61   --------->TGA1a                                ==============================MYC_MYB                                ------->GAMYB       --------->ANAC58                                ======================================MYC_MYB                                --------->MYB46(3)  --------->ANAC58                                <---------MYB111(1) --------->ANAC55(2)                               --------->MYB46(3)   <---------ANAC55(2)                               <---------MYB52(2)   --------->ANAC46                               <---------MYB55(2)   --------->O2                              --------->ANAC46      --------->bZIP60(2)                              --------->ANAC58      <---------bZIP60(1)                              --------->ANAC58  <---------At5g28300                            --------->MYB46(3) <-----------GT1 ----------->GT1                       >>>>>>>>>RAP2.2------>MYB83 <-----------STF1                  --------->WRKY18(1)--------->WOX13(1)     --------->TGA1a       <----------DOF2 --------->TOE2(3)<---------ICU4--------->TGA2(2)     ---------->ID1 --------->WOX13(1)------>MYB46(1)<-----------TGA1 ----->TEIL      <-----------HVH21------>MYB46(1) <---------ALFIN1    --------->GLK1(2)   gaaccttgtctttaacaccggtcaatctaaacaaccaaccaatcataattcaccacgtcatcacgtcgttataatctgtctctgtgtctctctcttcttc  16917300                                                                                       <---------At4g35610                                                                               <---------DAG2                    <---------ZAT6                                             <----------DOF2              ----------->HVH21                --------->YAB1                 <---------ANAC58            <---------ANAC58                  <<<<<<<<<ARR2                   <---------ANAC58            <---------ANAC58                  <---------ATHB12           <----------DOF2       ------            <---------ANAC46                  <<<<<<<<<ARR1           --------->ARR11(3)    <--------          --------->ZAT18                 ------------>CBF            <---------ARR11(3)    <--------         --------->ALFIN1            ---------->DOF2              ---------->DOF2  <-----------GT1 <-   tcactctccgagtggggtgatagtgtgactctgtaacgagaaagcacaatcatatcgattccttcttcaaaagctcttttgcttttttcatctccttttc  16917400                                   ----------->GT1                                 <---------YAB1                               --------->YAB1                              <---------YAB1                            -------->HAHB4                            <---------ICU4                            --------->YAB1                           --------->ICU4                           <---------ATHB51                         <---------ICU4                        --------->AHL20(2)                                                      <----                        <---------AHL20(2)                                                    <------                    --------->AHL20(1)                                                        -------     <----------DOF2--------->AHL20(2)                                                     <--------- ---->ID1           <---------AHL20(2)                                                     <---------AtMYB61 --DOF2            --------->AHL20(2)               <----------DOF2--------->ARR14(2)    <-----------RAV1(1) -DAG2    <----------DOF2--------->YAB1   *TSS    ------>ZmHOX2a(1)<---------ARR14(2)  <----------DOF2 ---------DOF2     <---------AHL20(2)   ---------->DOF2  <-----------GT1    <---------CCA1(2) <------   cctttctcttttcttttgtaattttattaattatgataagtgaaaagggctcctctttaaaacccttcgaattcgtccatctcttggttctttgtggtgg  16917500                                                           ----------->RAV1(2)                                                         --------->ANAC58                                                         --------->ANAC58                                                        <-------TEIL                                                      --------->ARR14(2)                                                      <---------ARR14(2)        --------->ARR14(2)                                                    --------->LBD16          >>>>>>>GRF7                                                   <---------ANAC58      <---------bZIP60(1)                                                   <---------LBD16 ===================HOX2a_HOX2a                                  <---------O2     <---------ANAC55(1)   --------->TGA2(1)                       --------->YAB1              <---------ANAC46<-------TEIL<------ZmHOX2a(1)                      --------->At4g35610          <---------ANAC58------>ZmHOX2a(2)       --------->ARR14(2)                   --------->At4g35610            <---------LBD16<---------ARR14(2)      --------->LBD16 --NtERF2       --------->At4g35610    <---------ANAC46 --------->SPL7   <---------TGA2(1) <---------ARR14(2) ---ANAC46 <------NtERF2     --------->YAB1     <---------ARR14(2)<------ZmHOX2a(2)    <---------LBD16 -->ALFIN1 <---------At4g35610    <-----------RAV1(1) <---------SPL7     --------->bZIP60(1) --RAV1(1) --------->At4g35610  --------->YAB1  --------->GLK1(2)--------->ARR14(2)  -------->P    -- ---DEAR3(1)  <------ZmHOX2a(1)<---------YAB1   --------->ARR14(2)====================HOX2a_HOX2a  <-   cgatggcattggcagaggagcagcatcagaattatcatgtggctgaggcgattccgggtacgcctgggatccatgatgtcaggattcaacccggttctga  16917600                         <------MYB83                        <---------AtMYB61                        --------->MYB111(2)                        --------->MYB55(2)                        --------->MYB46(2)                        --------->MYB111(1)               ----------->ARR10          <---------ANAC46       --------->ARR14(2)<------MYB46(1)                                                           <-    --------->LBD16     <---------MYB46(3)                         --------->At4g35610            ---   <---------LBD16     <---------MYB55(1)                          <---------ZAT2                 ===   <---------ANAC58    <--------P                           <-------GAMYB                       <----   <---------ANAC46   <---------MYB52(1)                   <---------ANAC46                     -----   <---------ANAC58------>ZmHOX2a(2)                       <------MYB46(1)             ==============   <---------ANAC55(1)<-------GAMYB            --------->ICU4      <---------At4g35610 ------>ZmHOX2a(1)  <---------LBD16  <---------LBD16       <---------LBD16  --------->MYB59              ============== ------->GLK1(1) <---------ARR14(2)     ----------->RAV1(2)<------MYB83        <---------HSFC1(2)==== --------GLK1(1) --------->ARR14(2)    ------->TEIL<------ZmHOX2a(1)           --------->HSFC1(2)<---   gaattccgggttctgtgttgatccggttggtgtttctaatgtacctggaattaggagagttgggttgagagctgaaatcgatacttctcctccattcgga  16917700             ----------->HVH21             --------->WRKY38(1)            --------->At5g28300            --------->ATERF1(1)            <------NtERF2           ----------->GT1           <---------DEAR4(2)           <---------ATERF1(1)          <---------DEAR3(1)          <---------ANAC46          --------->ALFIN1         <---------ABI4(1)         --------->ATERF1(1)         <------NtERF2       --------->ALFIN1       <---------DEAR3(1)      <------ZmHOX2a(1)   <-----------RAV1(2)              --------->ATHB12  <-------TEIL                     <---------YAB1 --------DEAR3(2)                <---------MYB46(3) --->ZmHOX2a(2)               <---------ANAC58                                 ---------->ID1 ============HOX2a_HOX2a      <---------ANAC58                         <---------TOE2(2) -----ARR14(2)             <---------MYB46(3)                          <---------TOE1(2) ---->ARR14(2)            --------->ALFIN1                            <---------MYB52(1) ====HOX2a_HOX2a          <---------AtMYB61                         <---------ANAC58 ===HOX2a_HOX2a     <---------ARR14(2)   <---------ANAC58           <---------ANAC46 ============HOX2a_HOX2a <---------MYB52(1)    <----------DOF2      <---------ANAC58 ---ZmHOX2a(2)      --------->ARR14(2)   <---------ANAC58        <----------DOF2  <----------DOF2   tcggttcaggaggcggtgactcgattcggtggtcgtggttattgggttcctttcaagcttgatgacactttcgtaagttttgttctttctcagttttttc  16917800              --------->ZAT14         --------->ZAT14         <---------ZAT14         <------ZmHOX2a(2)       --------->At4g35610                                                                         --       <---------At4g35610      --------->AHL20(2)                                      <----------DOF2   <-----------HVH21         --------->TOE2(3)               <----------DOF2  >>>>>>>>>>>>>>>>>LFY<--   ttcaatgtcagatcagtgtaatatacaaacacattaatatgcattgcatactaacatttgatgctttgatggtgaccattttccattgttctttacagtc  16917900  Previous    Next  AGI:  At2g40480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56270.1); similar to unknown [Populus trichocarpa] (GB:ABK92463.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 16917442    to: 16919670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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