Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ZAT6                    <----------DOF2          <----------DOF2   -------               <-----------GT1                     ==================HOX2a_HOX2a       ------->TEIL          <----------DOF2                   ---------->DOF2                 <---------DAG2    <------   <---------ANAC55(2)               <-------TEIL  ------>ZmHOX2a(1)<-------TEIL  <---------AtLEC2   --------->ANAC55(2)           <-------TEIL--------->DAG2   ------>ZmHOX2a(2) <-----------GT1------   ctaatatgtattctttttaactctattagtatatatacatacatgataaagtccttttgtatgatccacatacacatactttttacatgaatttgaagag  16893500                                                                                   <-------GAMYB                                                                                  <---------MYB46(3)                                                                               ------>NtERF2                                                                              <---------ETT(2)                                                                              --------->ETT(2)   --------->YAB1                                                            <------NtERF2  <<<<<<<<<ARR2                                                          --------->ZAT2             <  <---------ATHB12                                                       <---------ZAT2           ---  <<<<<<<<<ARR1                             <-------TEIL                 <---------At4g35610   ------ -------->AtSPL8                          <---------ARR14(2)             --------->At4g35610--------- ---------AtSPL8  ----------->GT1         --------->ARR14(2)          ---------->DOF2     <---------YAB1 ----->GT1   <---------YAB1            --------->YAB1    <---------MYB52(1) <---------ATERF1(1)------   tacaatcatatcaatatgagtcgataaatggatttttgtaatcatatacgttttcatccgtttccaaaaattcaaagctggcgactgttgttatcaatta  16893600        <---------ANAC58                                                     <---------AHL20(2)        <---------ANAC46                                                     --------->AHL20(2)        <---------ANAC58                                                --------->AHL20(2) ---------YAB1                                                        ----------->GT1 ------>YAB1             ----------->GT1  <------ZmHOX2a(1)          <---------TOE2(3) --->ATHB51     <---------ANAC58         ----------->GT1            ---------->DOF2 >WOX13(1)      <---------ANAC58    ---------->DOF2                <---------AHL20(2) --->YAB1      <------NtERF2    <----------ID1             ----------->GT1   --------->AHL20(1)   tcgtgatttttcttggaggcgttagaacagtattaagacaaagaggaaactaaaatcacatcagtaaatttaaagtaaataaaatggtggtatttcatcg  16893700                                                                      <---------ANAC46                                                                      <---------ANAC55(2)                                                                      --------->ANAC58                                                                      --------->ANAC55(2)                                                            <------MYB83                                                            <------MYB46(1)                                                           --------->MYB59                                                           --------->MYB46(2)                                                           --------->MYB111(1)                                                           --------->MYB111(2)                                                          <--------P  --------->ANAC58                                                          <---------MYB55(1)                                                        <------MYB83 <-------TEIL    --------->AHL20(2)                                                       --------->MYB111(2)      <---------YAB1                                                       --------->MYB111(1)  <---------AHL20(2)               --------->YAB1                         <--------P <---------------AtSPL8              <---------YAB1                     <-------TEIL  --------->MYB52(1)--------->YAB1 -----            --------->YAB1                      --------->CCA1(2)<---------------AtSPL3     ---------   --------->ANAC46                      <-----------GT1<------MYB46(1)  ------->TEIL<---------AHL20(2)   actatacacatcgattataaaaacatagcgattaatctacattttacaagattcaagttggtaggtaagggtacgtatttttatgatataaatactgtat  16893800                                                                      <------------CBF                                                               --------->ARR14(2)                   -                                           <---------ANAC58    <---------ARR14(2)                 <--                                           <---------ANAC46    <---------ARR11(3)          ----------                                           <---------ANAC58    --------->ARR11(3)          --------->ANAC58           <---------AHL20(1)          <------------CBF     <---------GLK1(2)              --------->ANAC58 ---->AHL20(2)                     --------->YAB1     <---------AHL20(2)               --------->ANAC58 -->GT1 ----------->GT1           --------->AHL20(2) --------->AHL20(2)                --------->ANAC58   aaatataagatagtatatttcatataagaaaacaaaataaaaattgtgtggaatattaaatagaatatcgtctattgagacatagaggcaagcaagtaat  16893900                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                          <----------                                                                                      ------>ZmHOX2a(1)                                                                                      ===============                                                                                   <------ZmHOX2a(2)                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                              <---------AHL20(1)                    ----------->HVH21 ===============                              --------->AHL20(1)                   <-----------HVH21------>ZmHOX2a(2)     --------->CCA1(2)        <---------AHL20(2)                  <---------TGA1a <---------ARR14(2)  *TSS                   --------->ARR14(2)                       <---------O2    --------->ARR11(3) -------->ANAC46         <---------ARR14(2)                       --------->O2   ==================== ---------GT1           <---------CCA1(2)                <---------TOE2(3)       <------ZmHOX2a(1) ->GT1<-------TEIL     --------->LBD16      <------ZmHOX2a(2)     --------->TGA1a====================   tcacgagatacaaatcggagttgtccgtatattatattttgtagcgatcaagagagactaaggcagacatgtgagaggggagaggatcctataaacaatt  16894000             --------->At4g35610             <---------At4g35610         =================HOX2a_HOX2a         ====================HOX2a_HOX2a         ------>ZmHOX2a(2)        <---------GLK1(1)        --------->GLK1(1)        =====================HOX2a_HOX2a        ==================HOX2a_HOX2a        <------ZmHOX2a(2)       <-----------ARR10       <---------AGP1       --------->ARR11(3)                                                              --------->ANAC58 ----->AHL20(2)                                                                        --------->ANAC55(2) ------AHL20(2)       ------>ZmHOX2a(1)                            <---------GLK1(2)   --------->ANAC58 ---->AHL20(2)     ------>ZmHOX2a(1)         <-----------GT1 --------->ZAT14<---------HSFB2a(2) -GT1  <---------ARR11(3)        --------->AHL20(1)          <---------ZAT14--------->HSFB2a(2) ==============HOX2a_HOX2a       --------->ARR11(3)       --------------->AGL15        --------->ANAC46 ===============HOX2a_HOX2a      <---------AHL20(1)       ------>ZmHOX2a(1)------>ZmHOX2a(2) ===============HOX2a_HOX2a     <---------AHL20(2)        <---------------AGL15      --------->MYB52(1) ==============HOX2a_HOX2a    --------->AHL20(2)          ========================HOX2a_HOX2a   taaatctaagatctctgcttcctccttctcatatatatattgcatatttacacatagttcctctatacagaaactgatcgagaaaactcacgaaacaaga  16894100                                                   <----------DOF2                                                  --------->MYB52(2)                           ------                                                 <-------TEIL                      <---------ATHB12 -      ---------->DOF2                           <-----------ARR10                --------->WOX13(1)--    --------->YAB1>>>>>>>>>TBF1                 <---------ARR14(2)       <---------ANAC58      <-----   <---------ATHB12     ----------->GT1         --------->GLK1(2)        <---------ANAC58   <--------   ggctaatcaaaagcatagaagaagaatggtttcaagggaacagaagagaggttctttgcaagagaagtttcaattgcttcgttcaatcactaattcacat  16894200          <---------bZIP60(1)     -------->HAHB4     --------->ATHB51     <---------ICU4                                                  <---------ARR11(3)     <--------HAHB4                                                  --------->ARR11(3)     --------->YAB1                                                 <---------CCA1(2)     -------->ATHB1                                          --------->WOX13(1)    <---------YAB1                                        --------->ANAC46    <---------ATHB51               <---------YAB1------->GAMYB <---------ATHB12    --------->ICU4                 <---------AHL20(2)     --------->ANAC58 ->MYC3   --------->bZIP60(1)     <---------AHL20(2)      --------->ANAC58 -------->At5g28300       <----------DOF2     --------->MYB52(1)--------->YAB1     --------->ARR11(3) --------->GT1        <----------DOF2  <-----------GT1   <---------TOE2(3)         <---------ARR11(3) --MYC3   --------->TGA2(1)   --------------->AGL15     <-----------GT1         <---------AHL20(2) ---GT1 <-----------GT1<XXXXXXXXXXXXXXXXXXXXMIR854A-E   --------->MYB52(1)      --------->AHL20(2)   gctgtaattattacatcactctctctttctttctatttttattacctccaacggagattaacgcaatcatatatctacatatataaatcttgttattcac  16894300                                                             <-----------GT1                                                        <---------YAB1                                                      --------->YAB1                                                      <---------ICU4                          <------ZmHOX2a(2)                          --------->YAB1             <---------YAB1               --------->KAN4(2)                         <<<<<<<<<ARR1               --------->ICU4              --------->HSFC1(2)             ----------->HVH21  <---------ICU4     --------->YAB1                <---------MYB46(3)            ------>ZmHOX2a(2)   --------->YAB1     <---------ICU4                --------->HSFB2a(1)          --------->ARR11(3)   --------->ICU4 <---------GLK1(2)                  <---------HSFB2a(1)          <---------ARR11(3)   <---------ATHB12   <---------YAB1                 ------>ZmHOX2a(2)    <---------ALFIN1     <<<<<<<<<ARR2<-------TEIL--------->ICU4   <-----------HVH21    <----------DOF2   acacacacacatgatctcacacatacaatcgtaatcaatatacatatagattattattattattcactctgtcacgatttcgatcgttccctttggatca  16894400  Previous    Next  AGI:  At2g40435.1    Description:  transcription regulator. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G56220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41465.1); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 16893902    to: 16895716    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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