Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ----------->GT1                              <---------ANAC55(2)                            <xxxxxxxxxxxxxxxxsmallRNA(s)                        <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       >>>>>>>>>E2Fc                       >>>>>>>>>E2Fd                      --------->LBD16                      ------>NtERF2                      <xxxxxxxxxxxxxxxxsmallRNA(i)                     <<<<<<<<<<E2Fa                     --------->ANAC58                     <xxxxxxxxxxxxxxxxsmallRNA(i)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                     --------->ANAC46                    <---------LBD16                                                    --------->TOE2(3)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               ----------->GT1                 <-----------GT1                                                 xxxxxxxxxxxxxxxxxxxx                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                    xxxxxxxxxxxxxxxxxxxx              <---------GLK1(2)                                                ----------------->AGL1              <---------ARR11(3)                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->ARR11(3)   --------->ARR14(2)                         ------>NtERF2           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             --------->LBD16     <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------LBD16     <xxxxxxxxxxxxxxxxsmallRNA(i)  ------------>MYB.PH3(1)              <xxxxxxxxxxxxxxxxsmallRNA(i)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                            <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------GLK1(1)                  <---------ICU4   <---------ANAC55(2)   --------->TOE2(3)<xxxxxxxxxxxxxxxxsmallRNA(s)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->GLK1(1)                  <--------HAHB4  <---------------   <xxxxxxxxxxxxxxxxsmallRNA(i)--------->TOE2(3)                    <---------ATHB12<xxxxxxxxxxxxxxxxsmallRNA(i)  <---------ANAC55(2)--------->ANAC58                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -->LBD16  --------->LBD16  <xxxxxxxxxxxxxxxxsmallRNA(i)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ->ANAC46xxxxxxxxxxxxxxxx>smallRNA(i)        <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i)   <---------MYB52(1)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -- ->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             --------->TOE2(3)<---------RAP2.6(2)  xxxx -LBD16xxxxxxxxxxxxxxxx>smallRNA(i)<---------ARR14(2)     <---------ANAC55(2)------>NtERF2     xxxxxx   aaaaacgtaaacccgagattttcccgccaaaaacgtaaatccgttattttttcgcccaaaacgtaaacccatcattttccggccaaaaacgtaaaaacct  16883900                 --------->TOE2(3)                <---------ANAC55(2)                ----------->GT1  --------------->AtSPL8               <xxxxxxxxxxxxxxxxsmallRNA(i)              <xxxxxxxxxxxxxxxxsmallRNA(s)              <xxxxxxxxxxxxxxxxsmallRNA(i)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         >>>>>>>>>E2Fd       <----------DOF2         >>>>>>>>>E2Fc    <---------MYB52(1)        ------>NtERF2    --------->LBD16        --------->LBD16 <---------ANAC58        <xxxxxxxxxxxxxxxxsmallRNA(i)       <xxxxxxxxxxxxxxxxsmallRNA(i)   xxxxxxxxxxxxxxxx>smallRNA(i)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       --------->ANAC58 <---------ANAC55(2)       <<<<<<<<<<E2Fa<---------ARR14(2)       --------->ANAC58 --------->ANAC55(2)                                 <---------ARR11(3)       --------->ANAC46 <---------ANAC58                                    --------->ARR11(3)      <xxxxxxxxxxxxxxxxsmallRNA(s)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->AHL20(1)      <---------LBD16--------->ARR14(2)                               --------->LBD16     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <---------ANAC55(2)     ----------->GT1                -   <-----------GT1   xxxxxxxxxxxxxxxx>smallRNA(i)                    <---------ANAC55(2)            <  <xxxxxxxxxxxxxxxxsmallRNA(i) <-----------GT1             --------->DAG2  --------->CCA1(1)       --  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxx>smallRNA(le3)  --------->GLK1(1) ----------------->AG <xxxxxxxxxxxxxxxxsmallRNA(i)         ----- xxx>smallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i)--------->TOE2(3)   --------->ARR14(2)         <------- --------TaNAC69(2) <---------GLK1(1) ----------------->AGL1      <---------ARR14(2)     <---------YAB1 ------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ----------->GT1 --------->ANAC55(2)xxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ----------------->AGL3  <xxxxxxxxxxxxxxxxsmallRNA(i)--------->YAB1 xxxxxxxxxxxxxxxxx>smallRNA(si3) --------------->AtSPL3   ---------->DOF2  --------->RVE1(1)---------   ataattttcccgccaaaaacgtaaatccgtgattttcggtaccaaaaacgtaaacctgtaaaaagtggaatccgtaaatatcttaagtttgatgataatg  16884000                                                                                                   xx                                                                                                 <xxx                                                                                                <----                                                                                               xxxxxx                                                                                               xxxxxx                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         ------                                                 -------->ATHB1                                xxxxxx                                                 <---------ICU4                               xxxxxxx                                                 --------->ATHB51                             xxxxxxx             --------->ATHB51                   <---------AHL20(2)                           xxxxxxxx             --------->AHL20(2)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxx             <---------AHL20(2)         <---------AHL20(1)                                  <xxxxxxxx             <---------ICU4             --------->AHL20(1)                                 <xxxxxxxxx            <---------YAB1           --------->YAB1                                        <xxxxxxxxx            --------->ICU4           -------->HAHB4                                       <xxxxxxxxxx          --------->YAB1             <--------ATHB1                                       xxxxxxxxxxx          <---------ICU4             <---------ICU4                                       <xxxxxxxxxx         <---------YAB1              --------->ATHB51                                     <xxxxxxxxxx         --------->ICU4              <--------HAHB4    <---------------AGL15              <xxxxxxxxxx       --------->YAB1               --------->ICU4     --------------->AGL15             xxxxxxxxxxxx      <---------YAB1                <---------YAB1 <---------YAB1                        xxxxxxxxxxxx    --------->YAB1               --------->ICU4 <---------ATHB51                       <xxxxxxxxxxxxx    <---------ICU4             --------->YAB1--------->AHL20(1)                     <xxxxxxxxxxxxxxxx    -------->HAHB4            <---------YAB1 <---------AHL20(2)                    <xxxxxxxxxxxxxxxxx   <---------ATHB51         --------->YAB1   --------->AHL20(2)                    <xxxxxxxxxxxxxxxxx   --------->ICU4       --------->AHL20(2)  --------->AHL20(2)                    <xxxxxxxxxxxxxxxxxx --------->YAB1 <---------AHL20(2)<---------ICU4--------->AHL20(2)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------->AHL20(2)    <---------YAB1<---------ATHB51  <---------ANAC55(2)    --------->MYB46(3)<----- ---------AHL20(2) <---------YAB1<---------YAB1 --------->ICU4           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------->AHL20(2)<---------AHL20(2) --------->AHL20(2)----------------->AG <-----------GT1xxxxxxxxxxx ---->AHL20(2)  --------->AHL20(2)--------->YAB1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxx --ICU4-------->HAHB4<---------AHL20(1) <---------AHL20(2)               <xxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxx>smallRNA(i2) <---------AHL20(2)  <---------AHL20(2)        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) >ICU4--------->ICU4 <---------AHL20(2) --------->AHL20(2)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   aattaataatgataattatttattatttttttataataataattaattaaattattacttaaatgggttaacccatttaacgactcaacccatcaaatta  16884100                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <x                                                                                                   <x                                                                                                   <x                                                                                                   <x                                                                                                  <--                                                                                                  <xx                                                                                                  <--                                                                                                  <xx                                                                                                  <xx                                                                                                  xxx                                                                                                  <xx                                                                                                 ----                                                                                                 xxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                             xxxxxxxx                                                                                           xxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        <---------ANAC46                                                                                      <xxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx           --------->WRKY38(1)                                                       xxxxxxxxxxxxxxxx           --------->WRKY12                                                          xxxxxxxxxxxxxxxx         <---------ANAC58                                                           <xxxxxxxxxxxxxxxx         <---------ANAC58                                                           <xxxxxxxxxxxxxxxx     <XXXXXXXXXXXXXXXXXXXXXXXMIR405A/B/D                                            xxxxxxxxxxxxxxxxx    --------->CCA1(2)                                                               xxxxxxxxxxxxxxxxx   xxxxxxxxxxxxxxx>smallRNA(le3)                                                    xxxxxxxxxxxxxxxxx  xxxxxxxxxxxxxxxx>smallRNA(s)                                                      <xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   xxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   <xxxxxxxxxxxxxxxxxx -----AHL20(2)                                                                    <xxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                 <xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxx>smallRNA(se3)                  <---------CCA1(2)              <---------YAB1xxxxxx --->AHL20(2)                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(se3)              --------->ANAC58                   xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(se3)              <xxxxxxxxxxxxxxxsmallRNA(le3)      xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(le3)              <xxxxxxxxxxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxx>smallRNA(fl3)               <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxx>smallRNA(se3)               --------->ANAC58                   xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxsmallRNA(i2)                <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxsmallRNA(fl3)               <---------WRKY12                     xxxxxxxxxxxxxxxxxxxxx xxxxxxxsmallRNA(i)                        <---------WRKY38(1)                  <xxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxsmallRNA(si3)                <---------WRKY45                    <xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxx>smallRNA(fl3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ICU4<xxxxxxx xxxxxxxxxxxxsmallRNA(i2)                 --------->WRKY18(1)                  <xxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxsmallRNA(fl3)               xxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxsmallRNA(se3)              <-----------HVH21                     xxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxx>smallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ICU4<xxxxxxxx xxxxxxxxxxx>smallRNA(se3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxsmallRNA(fl3)                xxxxxxxxxxxxxxxx>smallRNA(s)          <xxxxxxxxxxxxxxxxxxxxxx xxxxxsmallRNA(si3)                     <---------ANAC46                      <xxxxxxxxxxxxxxxxxxxxxx xxxxxxsmallRNA(si3)                    <------MYB46(1)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) xxxxxsmallRNA(si3)                     <------MYB83       --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxsmallRNA(le3)                     <---------MYB46(3)  <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----AHL20(2)                          --------->MYB59    --------->AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxx>smallRNA(se3)           <xxxxxxxxxxxxxxxxsmallRNA(i)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxsmallRNA(fl3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            xxxxxxxxxxxxxxxx>smallRNA(i)   aatgagttatgggttgactcaacccatttagcaaaatgagttgggtcaacccataactcatttaattctaaactcatttgattatgagttgagttgagtt  16884200      <xxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <-----------------AGL1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ----MYB46(1) xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----MYB83 <-----------GT1 xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ----->MYB59 xxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxx>smallRNA(s2) xxxxxxxx>smallRNA(i) xxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxsmallRNA(si3) xxxxxxxxx>smallRNA(i2) xxxxxxxxxsmallRNA(fl3) xxxxxxx>smallRNA(le3) xxxxxxxx>smallRNA(se3) xxxxxxx>smallRNA(se3) xxxxxxxxsmallRNA(fl3) >smallRNA(s) xxxxxx>smallRNA(si3) >smallRNA(i)<---------ALFIN1 xxx>smallRNA(fl3) xxxxxx>smallRNA(se3) xx>smallRNA(fl3) xxxsmallRNA(fl3) xxxxxxsmallRNA(se3) xxxxxx>smallRNA(se3) xxxxxx>smallRNA(le3) xxxxxx>smallRNA(fl3) xxxxxxsmallRNA(le3) xxxxx>smallRNA(se3) xxsmallRNA(si3) xxxxsmallRNA(si3) xxxxsmallRNA(se3) xxxxxxxxxx>smallRNA(i)                                  <---------bZIP60(1) xx>smallRNA(i2)                                         <---------O2 xx>smallRNA(si3)                                        --------->bZIP60(1) xxsmallRNA(se3)                                         <---------bZIP60(2) xx>smallRNA(s2)                                         --------->O2 x>smallRNA(si3)                              --------->ANAC46 xxsmallRNA(fl3)                              --------->ANAC55(1) xx>smallRNA(se3)                             --------->ANAC55(2) xxsmallRNA(le3)             --------->ARR14(2)     <---------ICU4 xxsmallRNA(fl3)        --------->ZAT18       <---------ANAC55(2) xxxxxxxxxxxxxxxxsmallRNA(fl3)                --------->ANAC58                                 ------ xsmallRNA(se3)         --------->ZAT14       --------->O2  ----------->GT1                   ------- x>smallRNA(fl3)        <---------ZAT14       --------->ANAC58--------->DOF5.7(2)            -------- x>smallRNA(si3)    --------->MYB52(1)        ----------->GT1 <---------MYB52(1)             <------- xxxxxxxxxxxxxxxsmallRNA(i2) <---------ARR14(2)    --------->ICU4                           <-------- xsmallRNA(fl3)  --------->ANAC46         ------>NtERF2 ----------->STF1                  --------->WOX13(1) xsmallRNA(si3)--------->ANAC58       <---------YAB1<------------CBF                    <---------ATHB12 xsmallRNA(se3)--------->ANAC58 <---------YAB1--------->bZIP60(2)   <-----------GT1     ------------>CBF   gggttacccattttgacacccctaactgcagtatatgattacgatgccacgtaatattgacgtcgttaattatctattcttctctcacaaatcaatcatc  16884300                                                               <-------GAMYB                                       --------->GLK1(2)      <---------MYB46(3)                                     --------->HSFC1(2)       --------->MYB111(2)                                     <---------HSFC1(2)       --------->MYB55(2)                -----                                --------->LBD16               --------->MYB46(2)                <----                               <---------LBD16               <--------P                     <-------- <-----------GT1               --------->LBD16               <---------MYB55(1)          ---------->DOF2 *TSS                    <-----------HVH21          <----------DOF2                    <------ZmHOX2a(2) ------>CBF        --------->ARR14(2)<---------HSFB2a(1)    <---------MYB52(1)    ------>ZmHOX2a(1) -->TOE2(3)        <---------ARR14(2)--------->HSFB2a(1)   --------->LBD16       --------->TOE1(2) ->YAB1        <---------YAB1 <---------LBD16 --------->MYB52(2)                <---------At4g35610 --ICU4      <-----------GT1 <---------LBD16<---------MYB52(1)--------->MYB52(2)--------->At4g35610 -ATHB12 <---------YAB1------>ZmHOX2a(1)  <---------YAB1 <---------LBD16        ----------->RAV1(2)   aattttcagttttcattaccatttcctcttcaccggggaaaattctgttagtttctttctccggtagttgaaagaaaatgtctcctgcgatcaaagcacc  16884400                                                          --------->ZAT2                                                          <---------At4g35610                                                          --------->At4g35610                               --------->At4g35610        <---------ZAT2                   --------->ZAT2                             --------->ATHB12            --------->ARR14(2)                --------->At4g35610                             <---------ICU4              <---------ARR14(2)                <---------At4g35610                            <---------YAB1              <------NtERF2                      <---------ZAT2       ------>MYB83       --------->YAB1               --------->LBD16                 <---------DEAR3(1)       ------>MYB46(1)    <---------ICU4              --------->DEAR3(1)         --------->YAB1     <---------MYB59     <---------YAB1              <---------LBD16           --------->ANAC58    <-     <---------MYB46(2)<---------ICU4           --------->KAN4(2)              --------->ANAC58   --- ---->DEAR3(1)         --------->YAB1          --------->KAN4(1)          <---------ETT(2)<---------ARR14(2) -----ALFIN1        --------->YAB1             <---------HSFB2a(1)    --------->ARR11(3) <------NtERF2 -ABI4(2)           --------->REM1(1)         <------ZmHOX2a(2)    <-----------GT1   <-----------HVH21   gctcttaccaaaccaagagccttcatcatcatcatcggagaaccatggatcattcgccggagctgtgtttaacatctcgacaagcatcgtcggagctgga  16884500                     ---------->DOF2                 <----------DOF2               <------NtERF2              ------>NtERF2              <---------RAP2.3(1)             <---------RAP2.3(2)           <---------RAP2.3(1)           <---------ATERF1(1)           ------>NtERF2           --------->LBD16          <---------RAP2.3(2)          <---------LBD16                                          <---------ANAC58                <-          <---------RAP2.6(2)                                 --------->YAB1           --------->At4g35610         <---------LBD16     <---------TOE1(2)                <---------ICU4           ----------->RAV1(2)       <---------ARR14(2)    <---------TOE2(2)               <---------YAB1            --------->ZAT2       --------->GLK1(2)    ------>ZmHOX2a(1)                <---------ATHB12          <---------ZAT2       --------->ARR14(2)  <---------TOE1(1)            --------->YAB1                 <---------At4g35610 --------ICU4<---------DEAR3(1)                      --------->YAB1<---------ANAC58  <-----------RAV1(2) ------>ICU4--------->ATERF1(1)           <---------CCA1(2)  --------->ICU4        ------->TEIL  <---   attatggcgattccggcggctttcaaagtcctaggtgtaatcccatctctatcgataatcgtaatcatagcttggctctccaatgtatcagctgggtttt  16884600                                                                                <-------GAMYB                                        <---------ANAC58                       <----------DOF2                                        <---------ANAC46                      <---------ANAC46                                        <---------ANAC58                 <---------ANAC58                                      ------>NtERF2                      <---------ANAC46                                      --------->LBD16                    <---------bZIP60(2)                                      <---------ATERF1(1)                <---------ANAC58                                     <---------ATERF1(2)                <------NtERF2    <-------GAMYB                                     <---------DEAR3(1)             --------->At4g35610 --------->MYB52(2)                                     --------->ATERF1(2)           <-----------RAV1(1)<-------GAMYB                                     --------->DEAR3(1)         <---------ARR14(2)  <---------YAB1                                    <---------LBD16             --------->ARR14(2)  <---------TOE2(3)                  <------NtERF2     --------->ATERF1(1)         <---------ARR11(3)  <---------ANAC46                 --------->LBD16   <---------RAP2.3(1)          --------->GLK1(2)<---------MYB52(1) <   <---------GLK1(1)       --------->MYB46(3)<---------REM1(1)  --------->ARR11(3) <---------At5g28300   --------->GLK1(1)  --------->GLK1(2)<------NtERF2       ----------->GT1<-------GAMYB <---------MYB46(3) --------TOE2(3)--------->DEAR3(1)--------->ANAC46     <---------SPL7  ------>NtERF2<---------TOE1(3) ------AHL20(2)<---------LBD16<---------MYB52(2)     <---------------AtSPL3<---------MYB52(1)    <---   taatgaaatccagtctcgccggagaatcaacaacttacgccggcgtgatgaaggaatcgttcggaaaatctggtgccgttgctgttacggttgttacaat  16884700                                                                               <----------DOF2                                                                       <---------ARR11(3)                            --------->HSFB2a(2)                       --------->RVE1(1)                    <---------YAB1  --------->ATHB12               --------->YAB1      <----------DOF2    <-----------GT1----------->GT1           --------->AHL20(2)<-----------GT1 ---------MYB46(3)--------->YAB1   <---------YAB1               --------->YAB1 <---------DAG2 ------MYB46(3)  <---------YAB1  --------->YAB1          ---------->ID1--------->GLK1(2)   --------->TOE2(3)   ggttgtgacttttgggtctatgattattttctcgattatcattggtaaaatttgattttgtctcaaaaataaaaatctgaactttttcacaaacctttga  16884800  Previous    Next  AGI:  At2g40420.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G56200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41461.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 16884301    to: 16886292    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version