Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------WRKY18(1)                                               --------->WRKY12                                             <-------GAMYB                                            <------MYB46(1)                                            <------MYB83                                          <---------MYB55(1)                                          <XXXXXXXXXXXXXXXXXXXXMIR862-5P      <---------YAB1                                         <---------MYB52(1)                <----------DOF2                                       <---------ANAC58                    <---------DAG2                                       <---------ANAC46                    --------------->AGL15            --------->ANAC58           <---------ANAC58            --------->YAB1            --------->ANAC58     <---------TOE1(3)         <---------MYB59 <---------------AGL15   <----------DOF2             ---------->DOF2<---------WOX13(1) --------->ANAC58            -------- ------>RAP2.6(3)         <---------TOE1(3) <---------MYB46(3)   --------->ANAC46         <---------HSFB2a(2) ----->MYB52(1)--------->MYB52(1)<---------TOE2(3)  --------->ATHB12  --------->YAB1<---------ZAT6 ->GT1    ---------->DOF2 <---------TOE2(3)<---------AtMYB61     --------->ANAC58 --------->YAB1   aacggctattgggaaagtaatggagtttgaggttaaaggttgcgtttggttgacttattggcctaacaagcatcatactttttatagtgatactagaaag  16876000                                                                                        <------------                                                                                        -------------                                                                                        <----------DOF2                                                                                    ---------->ID1---                     --------->TOE1(3)     <----------DOF2                         <-------GAMYB  ---                     --------->TOE2(3)  <-----------GT1                           <-----------RAV1(1)                <----------DOF2      <---------CCA1(1)                --------->KAN4(2) <---------DAG2           <---------GLK1(1)         <---------RVE1(1)              --------->AHL20(1) <---------ANAC58           --------->GLK1(1)        --------->ARR11(3)              <---------ARR11(3) <---------ANAC58       <---------TOE1(3)            <---------ARR11(3)        --------->ANAC58    --------->MYB52(2)       <---------TOE2(3)        ------>ZmHOX2a(1)             --------->ANAC58    <---------MYB46(3) -->DOF2 <------ZmHOX2a(1)     --------->TOE2(3)    <----------DOF2 <---------AHL20(1) <---------ANAC46   ttggaatttaaggagatgctttacctcaatcttccttagatatttcttttcttactttcaccctaagcaaaatattcccctagtttgttgcttttttcag  16876100                                                                                   ----------->GT1                                                                                 ---------->DOF2                                                                            <---------DDF1                             --------->ATHB12                               ----------->RAV1(1)                             --------->ATHB51                              --------->DREB2C(2)                            <---------ATHB51                               --------->At1g77200            --------->YAB1  --------->ICU4                                 --------->DEAR3(1)    ----------->GT1 <---------YAB1                                         --------->DEAR4(1) ---AGL15 --------->AHL20(2)<---------YAB1                             <---------ZAT14 -->AGL15--------->YAB1  ------------>ATHB5               <----------DOF2 --------->DEAR3(2)    <---- ------->DOF2    --------->ICU4  <---------AHL20(2)--------->ZAT14   --------->bZIP60(1)  --------->DAG2 ------>ZAT14  <---------ICU4-------->ATHB1        <---------ZAT14   <---------bZIP60(1) ---------->DOF2   taaagtttgtaaaataatacttatgatggaattattgaatttagaaaatacagtattgtgcttttctaatgacttcaccgacataaagaaaaaaagtttt  16876200                                                                             <---------YAB1                                                                            --------->AHL20(2)                                                                          <---------YAB1           --                                                                          --------->ICU4         ----                                                                         --------->TOE2(3)       <---                                                                   <-----------GT1               <---                                                              --------->AHL20(2)                 <---                                                             <---------AHL20(2)                  ----                                                             <---------AHL20(1)                <-----                 ----------->GT1                             --------->AHL20(2)             <------MYB83                 <---------ANAC46           <---------MYB46(3)<---------AHL20(2)  <---------ANAC55(2)          <---------YAB1                   <---------MYB52(1)--------->AHL20(1)   --------->ANAC55(2)       ------->TEIL                       <-------GAMYB  --------->AHL20(2)<---------ICU4   <-------- -----ANAC46---------->DOF2           <-----------GT1 --------->TOE2(3) <---------ICU4      <------MYB46(1)   gtatatatgaatatcaaagtcgtatatagtccatagtttttttccgttgttgttatccataaatttatttttcaacattattatacgtataatttggtgg  16876300          <---------AHL20(2)    --------->TOE2(3)                                                           --------->AHL20(2)   --------->YAB1                                                               --------->AHL20(1) ---->ZmHOX2a(2)                                                      ------------>CBF ----->ARR11(3)                                                      ----------->GT1 ------AGP1                                                --------->ANAC46<---------AHL20(2) ------ARR14(2)                                            --------->ANAC58<---------AHL20(1) ------ARR11(3)                                <------------CBF   --------->CCA1(2)    ---------->DOF2 ----->ARR14(2)                       <---------YAB1       --------->ANAC58--------->AHL20(2) ----MYB46(3)--------->ARR11(3)     <---------AHL20(2)   ----------->RAV1(1)    <---------AHL20(2) -ANAC46  --------->AHL20(2)       <---------AHL20(2)   --------->MYB46(3) --------->AHL20(1)    <---   atctaacataaataaaatcatgtagtagaagtttttttttatttttgaaaattggagaaccacacaagagatggcaataaaataaaatgaaaagtctcta  16876400                              --------->ALFIN1                            --------->O2                            <---------ANAC55(1)                            ======================bZIP_DOF                            <---------ANAC58                            --------->TGA1a                            <---------TGA1a                            <---------ANAC46                            <---------ANAC58               --------->AtLEC2           ------------>CBF <---------bZIP60(2)      ------>ZmHOX2a(2)     <---------O2     <------ZmHOX2a(2)     ----------->bZIP911(2)    <---------ARR14(2)    <---------TGA2(2)               <---------ZAT18    <---------ARR11(3)   ----------->TGA1          --------->AtMYB61    --------->ARR11(3)   ----------->HVH21     --------->ANAC58                --------->At4g35610    <---------AGP1     --------->At4g35610     --------->ANAC58     <---------ANAC58    ------>ZmHOX2a(1)    --------->AGP1   --------->DAG2    ---------->DOF2    <---------DEAR3(1) --------->YAB1        --    --------->ARR14(2) <---------At4g35610  --------->ZAT18 <---------PCF2  <---------ATHB12   <-----   <---------CCA1(2)---------->DOF2   <---------ATHB12<---------ATHB12    --------->WOX13(1)   ------ --------TBP*TSS    ==================bZIP_DOF --------->MYB46(3)   <---------ANAC58 ------>ZmHOX2a(1)   tttgtagatctagagcaatgcaaaaagctgacgtgtaccaatgaagcccacgaccaatggtgggctcttggcttctcaatcatcttcctccttctcgttt  16876500          <------NtERF2          ------>NtERF2         --------->RAP2.6(2)         --------->DEAR3(1)         --------->RAP2.3(2)         ------>NtERF2       <---------LBD16       <---------At4g35610                                 <---------HSFC1(2)       --------->At4g35610                                 --------->HSFB2a(1)       --------->LBD16                                     --------->HSFC1(2)      <---------ANAC58                                    --------->ARR11(3)      <---------ANAC58                             >>>>>>>>>TBF1     <---------LBD16                           --------->At4g35610 --------->ARR14(2)        <-------   --------->GLK1(2)                         --------->YAB1<---------HSFB2a(1)           ---------->ID1   <---------ARR14(2)                  --------->YAB1     <---------ARR11(3)       <---------DAG2   --------->ARR14(2)                 <---------ATHB51    <---------ARR14(2)  <-----------HVH21  <---------GLK1(2)     <-----------ARR10--------->ICU4   --------->ARR14(2)  <-----------TGA1 ------->LBD16          <---------ARR11(3)--------->YAB1  --------->GLK1(2)  <---------bZIP60(1) ----ARR14(2)           --------->ARR11(3)<---------ICU4 <---------GLK1(2)   --------->bZIP60(1) --->ARR14(2)        <---------GLK1(2)<---------ATHB12>>>>>>>>>TBF1<---------ARR14(2)<----------DOF2   ccgagattccgcggccaacttccgattatcttctcagccaataataatcagaagaagaagaatcttccaaatccaaacgtcgtcactctttgtctccact  16876600                                                                             ------>NtERF2                                                                            --------->DEAR3(1)                                                                           <------NtERF2                                                                           --------->DEAR4(2)                                                                           --------->RAP2.3(1)                                                                          <---------RAP2.3(1)                                                                          --------->ABI4(1)                                                                         --------->RAP2.3(3)                                                                         --------->RRTF1(3)                                                                         --------->RAP2.3(2)                                                                         <---------ALFIN1                                                                         --------->RRTF1(2)                                                                         --------->DEAR3(1)                                                                         <---------DEAR3(1)                                                                         --------->RAP2.6(2)                                                                         --------->ANAC46                                                                         <---------ATERF1(2)                                                                        --------->RAP2.6(1)                                                                        --------->ATERF1(1)                                                                        --------->RRTF1(1)                                                                        --------->RAP2.3(1)                                                                        --------->DEAR4(2)                                                                        <------NtERF2                                                                        --------->ORA47(2)                                                                        --------->ERF1                                                                       --------->ABI4(1)                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                       <---------DEAR4(2)                                                                       --------->At4g35610                                                                       <---------DREB2C(1)                                                                       <---------At4g35610                                                                       <---------RAP2.3(1)                                         --------->LBD16              --------->ATERF1(2)                                        --------->ANAC58              --------->RAP2.3(2)                                        --------->ANAC58              --------->RAP2.3(3)                                        --------->ANAC46              <---------ATERF1(2)                                       ------>NtERF2                  --------->ANAC46                                       <------NtERF2                  --------->DEAR3(1)                                       <---------LBD16                <---------DEAR3(1)                                       --------->LBD16               --------->DEAR4(2)                              <------NtERF2                          --------->RAP2.3(1)                              <---------MYB52(1)                     --------->ATERF1(1)                             <-----------TGA1                        --------->ERF1                             ------>NtERF2                          <---------ATERF1(1)                             <---------RAP2.6(3)                   --------->ANAC46                             <-----------HVH21                    ------>ZmHOX2a(1)                            --------->RAP2.6(2)                  <---------ALFIN1                            --------->ANAC46                --------->DEAR3(1)     <---------MYB52(1)                            <---------ATERF1(2)             <---------ALFIN1--------->RAP2.3(2)                            --------->DEAR3(1)           --------->DEAR3(1)--------->ATERF1(1)                            --------->RAP2.3(3)          <---------ALFIN1--------->ATERF1(2)                 ------>ZmHOX2a(1)    --------->DEAR3(1) --------->AtMYB61<---------ATERF1(1)  >>>>>>>>>>>>>>>>>LFY     --------->RAP2.3(1)    <-----------HVH21<---------DEAR3(1) --ALFIN1     ------>ZmHOX2a(1)    --------->ANAC46     --------->MYB46(3)------>NtERF2             -   ctcattccaatgtctcctcctctcaaatcgccgtcactcgccgcgcaattctcgtcgcaccaccgctcctcgccgccgccgcttcgttgtttctctctat  16876700             ----------->RAV1(2)             --------->ZAT2             <---------ZAT2                                              ----------->RAV1(2)             --------->At4g35610                                        ------>NtERF2             <---------At4g35610                                        --------->LBD16          <---------At4g35610                                          <---------ALFIN1       ------>NtERF2                                                   --------->DEAR3(1)    --------->ZAT2                                                   <---------ATERF1(1)    <---------At4g35610                                              ------>ZmHOX2a(1)    --------->At4g35610      <---------ARR14(2)                ------>ZmHOX2a(1)    <---------ZAT2         --------->LBD16                <---------At4g35610--------->ALFIN1    ----------->RAV1(2)   --------->ANAC46      <-----------RAV1(1) <---------ALFIN1  <-----------RAV1(2)    <---------At4g35610    ------>ZmHOX2a(1) ------>ZmHOX2a(1) ------>ZmHOX2a(1)       <---------LBD16      ----------->RAV1(2)<---------ALFIN1 -------->TOE2(3)        --------->At4g35610 ------>ZmHOX2a(1)<---------ALFIN1   ttcctcagctgcctctgctgagacttctgcggaatcagtagctcttcctcctgttgctactgctcctcctcctccgcctgtggagaaggaagaggcgata  16876800                   <---------DEAR3(1)              <---------bZIP60(2)              <---------ANAC58                  ---------->DOF2              <---------ANAC46             <---------MYB52(1)              <---------ANAC58      <---------MYB52(1)           ----------->HVH21    --------->At4g35610      --------->GLK1(2)         <---------At4g35610  --------->CCA1(2)     <---------GLK1(2)     <------MYB83  <----------DOF2                 --------->ANAC58           <  <---------HSFC1(1)       <------MYB46(1)<-------GAMYB                  --------->ANAC58       <----  --------->HSFC1(1)    <---------AtLEC2 <-----------RAV1(1)             --------->GLK1(2)--------->ARR14(2)  <---------HSFB2a(2)   <---------ANAC58 <---------MYB46(3)       --------->ALFIN1        <---------ARR14(2)  --------->HSFB2a(2)   <---------ANAC58 --------->MYB55(2)     --------->ALFIN1         <------ZmHOX2a(1)   acttctagaatctatgacgcgtctgtgcttggtgagccgatggctgttgggaaagataagaagagagtgtgggagaagctattgaatgcgaggattgtct  16876900  Previous    Next  AGI:  At2g40390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41445.1) Range:  from: 16874371    to: 16876167    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g40400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G56140.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64033.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41449.1); similar to hypothetical protein OsI_004191 [Oryza sativa (indica cultivar-group)] (GB:EAY76344.1); contains InterPro domain Protein of unknown function DUF399 (InterPro:IPR007314) Range:  from: 16876412    to: 16879835    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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