Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <-----------HVH21                                                <-----------TGA1                                          <-------PIF5                                          ------->PIF5                                         --------->ANAC58                                         --------->ANAC46                                         --------->ANAC58                                         --------->bZIP60(2)                                     --------->ANAC58     --------->HSFB2a(1)                                     ------>MYB83         --------->HSFC1(2)                                     --------->ANAC58     <---------HSFC1(2)                                     ------>MYB46(1)      <---------HSFB2a(1) ---------At4g35610     <---------------------WRI1  <---------At4g35610 --->CCA1(2)   --------->DAG2<---------------AtSPL8 --------->At4g35610 -TOE2(3)     ---------->DOF2--------->DAG2   <------NtERF2                                       --- -TOE1(3)  --------->ANAC46 ---------->DOF2 <---------DEAR3(1)   --------->REM1(1)               <---   tgagctaatttagacgaaaagcagagtaagaaaagtaccaagcacgtcgtcgtcatcggaaaattctacatctccatcttctgttccttcatgtgttcca  16863400           ----------->GT1                         --------->ANAC58          ----------->GT1                          --------->ANAC58   ------>ZmHOX2a(1)                               --------->AtLEC2   --------->At4g35610                           <-----------RAV1(2) --------->ANAC58 ------>YAB1                              ---------->DOF2            --------->ANAC58       --------- ------ATHB12                         --------->GLK1(1)         <---------ICU4             <---------AHL20(2)   tcatcctctgaatcggaaaaatcggagtcgaaatcgtcggaattcaaagaaccaggcaaactctaaaaatcacccaaaaaaaaaaaaccagaataaatca  16863500                                                                                 --------->HSFB2a(2)                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                        --------->LBD16                                                                       <---------HSFB2a(2)      <----                                                                       <---------ANAC46--------->ARR14(3)                                                                       --------->HSFB2a(2)    <------                   ---------->DOF2                                    <---------LBD16  --------->ARR11(3)            ----------->GT1                                         <---------ARR14(2) <---------ARR14(3)           <---------ARR11(3)        --------->YAB1            --------->GLK1(2) <---------HSFB2a(2)<       ---------->DOF2      --------->ALFIN1               --------->YAB1    <---------ANAC46 ------>ZmHOX2a(1) >WOX13(1) --------->ARR11(3) <------ZmHOX2a(1)    --------->LBD16  --------->ARR14(2) <---------ARR11(3)   aatgcagaataaagatgttacaaaagagaagaggagcaagaagaatacatctccgtcgtaatcagaatcagttccggatgcttgtagaaggtcttcctct  16863600                                              --------->ARR14(2)                                              <---------ARR14(2)                       <---------At4g35610                                            --------->LBD16                            --------->At4g35610                                           --------->HSFB2a(2)                        --------->MYB52(2)                                           <---------HSFC1(1)                       <---------MYB52(1)         <---------At4g35610               --------->HSFC1(1)                       --------->DOF5.7(2)    <----------DOF2                        <---------HSFB2a(2)                     --------->TOE2(3) <---------TOE1(3)                        <---------LBD16                    <-----------ARR10 ------DOF2                          <---------ARR11(3)   <----------DOF2   <---------CCA1(2)       - ---------AGL15                      <---------GLK1(2)   <---------ANAC58--------->At4g35610       <- -----------GT1                      --------->ARR11(3)  <---------ANAC58<---------At4g35610<--------   tttaagctttctgcttctactggtttcttctgtttctgagattttccagaaacgtttttgcttttggtttctatcagcttatcttcgttagctcctttgc  16863700                    --------->LBD16              --------->ZAT2              --------->HSFB2a(1)              <---------HSFB2a(1)              <---------HSFC1(2)              --------->HSFC1(2)              <---------At4g35610              <---------ZAT2              --------->At4g35610         --------->At4g35610         <---------At4g35610       <---------ANAC58                     <---------ANAC58       <-----     <-----------TGA1    <---------ANAC58                               <---------ANAC55(2)    ------     <-----------HVH21   <---------ANAC58                               <---------ANAC58<---------TOE1(3) ----->ZmHOX2a(1)  <---------HSFB2a(2)                                  ----------->GT1 <---------TOE2(3) --------ALFIN1    --------->HSFB2a(2)                                 <-------TEIL --------->CCA1(2) --DOF2  <---------------------WRI1<---------ANAC58                 *TSS--------->ANAC55(2)    <-----   tcctcttcgtcatcggagcttccagaggcgagttttggcctgagaagaaatttgttttaagaaggcaaggggatgcgtaacaagagatttagggttttag  16863800                                                            <---------ANAC58                                               --------->ANAC58                                               --------->ANAC46                                               --------->ANAC58         --------->CCA1(2)                                       <------------CBF     --------->ANAC46     ----------->GT1                 <---------AHL20(2)     <---------ANAC58<---------TOE2(3) ----TOE1(3)                         <---------YAB1         ----------->GT1 <---------TOE1(3) --->MYB59                        <---------AHL20(2)        <---------ANAC55(2)             ------->TEIL ----TOE2(3)                      --------->AHL20(2)        --------->ANAC55(2)        --------->MYB52(1)   gttgaagtcgtaactctctaatgggcctgagaataattttttattgaacaaggcatgggaatgcgtaacaagagatttagggttttagataatggaccta  16863900                                                         <---------MYB46(3)                                                     --------->ALFIN1                      ----------->GT1                <---------AtMYB61                 --------->REM1(2)                <-----------RAV1(1)              <---------ANAC58                    <---------AtMYB61        ----------->GT1              <---------ANAC46                  <-----------RAV1(1)       --------->DAG2              <---------ANAC58                <----------DOF2       ----------->GT1            <-----           <----------DOF2            --------->AHL20(2)<---------ANAC46 ---------->DOF2       <-----          <----------DOF2  ---------->DOF2   --------->TOE2(3) <---------YAB1      <----------ID1   <   tatactaatgggcctttcgtgaagacgataaaagaaaaaatttaaaacctttgtggtggtgtttgatgaatggtgaaaagtgaaaacgacaaatagactt  16864000                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --     <---------YAB1                                                                               <-- <---------ANAC58               <--------P                                <---------ARR11(3)      <-- <-------GAMYB                  <---------WOX13(1)                      <---------YAB1            --- <---------ANAC58        <---------YAB1                  --------->YAB1 --------->ICU4       <------- ----DAG2      <---------DAG2  <-------GAMYB ---------->DOF2----------->GT1             --------->AHL20(2) -----DOF2     <----------DOF2<---------MYB46(3)        <---------YAB1--------->YAB1   --------->AHL20(2) ---------MYB46(3) <---------AHL20(2)------>ZmHOX2a(2)--------->YAB1--------->ARR11(3) <---------AHL20(2)   tttggttgtgattaaaacttttttattcttcttggttgatccaattctaaagtgtctgataatagttatatatcatgattttcgccaatataaattaaca  16864100   --------->AHL20(2)   <---------AHL20(2)  --------->YAB1 <---------YAB1 ------>ATHB1 ------->YAB1 -------HAHB4                                            <------MYB83 ------->AHL20(2)                                        <------MYB46(1) --------ICU4                   ----------->GT1         --------->MYB59 ------->ATHB51     <---------CCA1(1)          <---------AHL20(1) -------YAB1       --------->ARR11(3)          --------->AHL20(1)  <----------ID1             <------ -------ATHB51     <---------ARR11(3)         --------->AHL20(2) <---------At4g35610        --------- ------>ICU4  --------->YAB1    --------->MYB52(2)    <---------MYB52(1)                    <-------- ----GT1     <---------YAB1   <--------P  --------->AHL20(2)     --------->At4g35610       --------->AHL20(2)   attattaaaatttgtataatagatattatctggttagtgaattttaaaatatatatgttaggttttaagatgacaaatgagtttagtttgctatttattt  16864200                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                               <---------YAB1                                                             <---------ICU4                                                             --------->YAB1                                                             -------->ATHB1                                                        <------ZmHOX2a(2)                                               <---------ANAC55(2)   --------->AHL20(2)        ------                                             --------->YAB1 <---------ATHB12    <---------ANAC58       <---------WOX13(1)                 --------->WOX13(1)--------->ICU4      <---------ANAC46    <---------AHL20(2)               ------->TEIL      --------->ARR11(3)       <---------ANAC55(1)    --------->AHL20(2)            <---------YAB1       <---------ARR11(3)<---------AHL20(2)    ------ ---YAB1                       <---------AHL20(2)  ---------->DOF2<----------DOF2              <----- >AHL20(2)            --------->TOE2(3)--------->ARR11(3)   <---------ATHB51    --------->ANAC55(2) - -AHL20(2)            --------->TOE1(3)<---------ARR11(3) --------->WOX13(1)    <---------ANAC58    <   tagtatttaattggtttgcaaatgccttaaaaatttatgaatatctatcatgtaaaagatcaattattcttttatatattttgcgtgtttatagctaagc  16864300  Previous    Next  AGI:  At2g40360.1    Description:  transducin family protein / WD-40 repeat family protein. similar to ATRAPTOR1B/RAPTOR1B (RAPTOR1), nucleotide binding / protein binding [Arabidopsis thaliana] (TAIR:AT3G08850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41286.1); similar to putative WD-40 repeat protein [Trifolium pratense] (GB:BAE71307.1); similar to WD40 [Cucumis melo] (GB:AAU04772.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain BOP1, N-terminal; (InterPro:IPR012953); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 16859958    to: 16863768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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