Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------TOE2(3)                  <---------ANAC46                     <---------AHL20(2)        <-----------GT1                                --------->AHL20(2)        --------->YAB1                                 --------->ATHB51        --------->MYB52(1)                            <---------AHL20(1)     --------->YAB1                                   <---------AHL20(2)     <---------ICU4 <---------ANAC46                  --------->AHL20(2)   --------->AHL20(2)  <---------ARR14(2)           ------>MYB83 ------->YAB1  --------->ALFIN1 <----------DOF2     ------>MYB46(1)                 --------->YAB1 ->ANAC58      <-----------RAV1(1)             <-----------GT1       <------ZmHOX2a(1)        ------- ->ANAC58<---------TOE2(3)<---------YAB1 <---------YAB1--------->ATHB12  <---------TOE2(3)------->GAMYB   atcaaaataataacgatgtgttgtgtatatgatactttcatttatgaataaaccaaattatttgatgtataggataatgtttttttttataaccgaaatt  16842900                                                      --------->TOE2(3)                                                      --------->YAB1                                                <-----------GT1                                           --------->AHL20(2)                                        --------->AHL20(2)         --------->TOE2(3)             --------->AHL20(2)        --------->ANAC58   --------->AHL20(2)      <----------DOF2 <---------AHL20(2)    --------->ANAC46 -->GLK1(1)        ------->TEIL    --------->AHL20(2)<-------TEIL--------->ANAC58   ccaaattaaaacataaatatgtatataagctttcagataaaataaaaaattaacatccataatctacaagaaattgtattttctgaaaatcgaatagaaa  16843000                                                             --------->LBD16                                                           <---------LBD16                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                       ---------->DOF2                                                      <---------ATHB12                                              <---------AHL20(1)                                              <---------AHL20(2)   <---------At4g35610     --------->AHL20(2)         --------->TOE2(3) --------->AHL20(2)  --------->ATHB12     <---------GLK1(2)      --------->AHL20(1)   --------->At4g35610 <---------YAB1  --------->ANAC58             --------->AHL20(2)   ----------->RAV1(2) --------->ICU4  --------->ANAC58            --------->AHL20(2) <-------TEIL         <-----------GT1-   cacatgattaaacaattggacgaaagaatttctacataaatctctgaataaattcaataaatccggttcatctgaagaaactaaattgaaccatactctg  16843100                                                                                                 <---                                                                                             <-------                                                                                            <--------                                                                                        <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                     --------->AHL20(1)       <---------AHL20(2)                                                            <---------AHL20(2)       --------->AHL20(2)                                                           <---------AHL20(2) <------MYB46(1)         --------->CCA1(2)                                          --------->AHL20(2) <------MYB83         <---------TOE2(3)                                           --------->YAB1<---- -------->MYB59   <---------MYB52(1)                                      --------->CCA1(2)<---------   gttcggtttttaaatgggccgtttgagatttgagaaggcccatagttgataacattcaggcttcaaattgcaaatgatatacaaaaataatttatgcggc  16843200                                                                                                 ----                                                           ----------->GT1                       <---                                                          <---------ARR14(2)                     <---                                                         <------NtERF2                         ------                                                         <-------GAMYB                   <---------ANAC58                                                        <---------MYB46(3)               <---------ANAC58                                                       <---------ANAC46                --------->At4g35610                                                     ------->GAMYB                     <---------At4g35610                                                    --------->MYB46(3)              <---------ZAT14                                                   ------>MYB46(1)                  <---------At4g35610                           <-------TEIL            ------>MYB83                     --------->ZAT14 -        <---------ICU4     ------------>CBF       --------->MYB52(1)                --------->At4g35610 -------DOF2           <---------------AtSPL8    --------->AtMYB61              ------>NtERF2 <------ --RAP2.6(2)          <---------TOE2(3)         --------->DEAR3(2)        ------->GAMYB------>NtERF2- -LBD16--------->ICU4 <---------TOE1(3)   <------------CBF--------->ARR14(2)--------->DEAR3(1)<------ -----ANAC46    <---------TOE2(3)       <---------YAB1<---------LBD16  ----------->RAV1(1) --------->ALFIN1 --RAV1(1)      <---------YAB1<------------CBF  --------->MYB46(3)    --------->MYB46(3)*TSS  <------   ttattcgtaagaattactaagattaagggtacaattgaaatttcgattgaaccaacggcggatgtgaaatcaacaacagcgacgactgcagccgtgccga  16843300                                                   ----------->HVH21                                                  --------->TOE1(1)                                                  --------->TOE2(1)                                                 ------>ZmHOX2a(1)                                                 <---------LBD16                                                 =========================HOX2a_HOX2a                                                 ==========================HOX2a_HOX2a                                                --------->TOE1(2)                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->ARR14(2)                                             <---------ARR14(3)                                             <---------ARR14(2)                --------->GLK1(2)                                            --------->GLK1(1)                  --------->ARR11(3)    <---------CCA1(2)                       <---------GLK1(1)                  <---------ARR14(2) ----->ZAT14                               ----------->ARR10                   --------->ARR14(2) ------ZAT18                             --------->REM1(2)                     <---------ARR11(3) ------ZAT14                            --------->ALFIN1                      <---------GLK1(2) >NtERF2                               --------->LBD16                        <---------ARR14(1) -------->ANAC58                      <---------ANAC46               --------->TOE1(2) ---ANAC46                           <---------LBD16                ------>ZmHOX2a(2) -------->ANAC58             --------->ANAC58<---------ARR11(3)    <------ZmHOX2a(2) ---ANAC58                   --------->ANAC46--------->ARR11(3)   --------->ARR11(3)    --------->AHL20(2) ---ANAC58                   --------->ANAC58--------->ARR14(3)   <---------ARR11(3)    <---------AHL20(2)   gcactcatctcttcttctctctcagtctcgctcgccatctccgtggagatcctcggacatggtcatgagatcgtaagagagaatcttcaaaaaattgaaa  16843400                                   <------NtERF2                                  <---------LBD16                                 <---------ANAC46                        ===============================HOX2a_HOX2a                        ================================HOX2a_HOX2a                  --------->At4g35610                <------ZmHOX2a(1)--------->ETT(1)   --------->LBD16            --------->TOE1(2)    <---------LBD16   --------->LBD16          --------->ANAC58     <-----------HVH21<------ZmHOX2a(2)                   <---------At4g35610          --------->ANAC58    <-----------RAV1(1)------>ZmHOX2a(2)                  --------->At4g35610  <---------GLK1(1)     <------ZmHOX2a(1)      <---------ARR14(2)      <---------ZAT14  --------->GLK1(1)   <---------TOE2(3)        --------->ARR14(2)      --------->ZAT14           ----   ttggaaatcgataagctaggagctaaggagaaatgtcggggaaactttggatcccgagatttattctcatcactctactgtttattagctcacgagttaa  16843500                                                                                         --------->At4g35610                                                                                    <---------ZAT14                                                                                    --------->ZAT18                                                                                    --------->At4g35610                                  --------->ARR11(3)                                <---------At4g35610                            ----------->RAV1(1)                                   --------->ZAT14                         --------->ANAC58                                         <---------ZAT18                         --------->ANAC46          ------>MYB46(1)               --------->ALFIN1                         --------->ANAC58          ------>MYB83             --------->MYB52(1)                      --------->ZAT14<----------DOF2                       ------>ZmHOX2a(1) ----->ZAT6       <-----------GT1 <---------ARR11(3)                   <-----------GT1   <---------At4g35610   ctctcaatgtgaattcagtttcactggacgcaacaaggtctttcatttcaacctagcatcttcgattcggaattatcctcacggtgtgctcagcgaagat  16843600                                                                                          <---------YAB1                                                                                        <---------ICU4                                                                                        -------->ATHB1                                                                                        --------->YAB1                           --------->GLK1(2)                                           <---------ATHB51               <----------DOF2             <---------ANAC58                            <---------AHL20(2)            ---------->ID1<---------GLK1(2)<---------ANAC58           --------------->AtSPL3         <----------DOF2  --------->ARR14(2)       <---------ZAT18  --------->GLK1(2)  --------->AHL20(2)         <---------DAG2   <---------ARR14(2)       --------->ZAT18 <---------GLK1(2)   --------->ICU4   <----------DOF2      <---------TOE1(2)<---------YAB1<----------DOF2--------------->AtSPL8        <   gggtactttcgcttttccttttgtcccagattccatttcttatatgcttgaagttcgctttcaatttcaaattctgtacatcttatgaaattattatgta  16843700                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               >>>>>>                                                                                               ------                                                                                               >>>>>>                                                                                               ------                                                                                               >>>>>>                                  <---------ZAT6                                              -------                 <---------YAB1 <------MYB83                                                  <------               ----------->GT1  <------MYB46(1)             <-----------GT1                   <------          <------MYB46(1)       ----------->GT1   <-------TEIL         <-----------RAV1(1)    <------          <------MYB83         <---------AtMYB61 ----------------------->TaNAC69(2)         ========= -----------RAV1(1) <---------ANAC46   ----------->GT1     <<<<<<<<<MYB98 <---------ANAC46  <--------   gaatgttgcatttggtattgtgatttgtactggatggtgttaagttaaaatgttcgtctatgttacttcatttgtgttgtgcttatactaaatgcaataa  16843800  Previous    Next  AGI:  At2g40316.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO41434.1); contains domain PD106563 (PD106563); contains domain PTHR15071 (PTHR15071) Range:  from: 16843288    to: 16846267    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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