Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                      <-----------ARR10                                     ------>NtERF2                                      <---------ARR11(1)                                    <--------                 <---------ATHB12     ------->TEIL                                         <---------RAP2.3(3)       <---------YAB1        <---------YAB1                                                <---------ANAC46    <---------ARR11(1)      --------->AHL20(2)                               ------>ZmHOX2a(2)-------    --------->ARR14(2)      <---------AHL20(2)                        ------>MYB46(1)      <---------RAP2.6(2)    <---------ARR11(3)     --------->YAB1                             ------>MYB83         <---------DEAR3(1)   <---------CCA1(2)-------->P--------->YAB1        <---------ANAC58  -------->P           <---------RAP2.3(2)   ------>MYB83  --------->MYB46(3)   --------->GLK1(2)          <-----------GT1          --------->RAP2.6(3)   <---------ARR14(1)    <---------GLK1(2)          <---------ANAC58  ===============================   ------>MYB46(1) --------->WOX13(1) --------->ARR14(2)       <---------KAN4(2)      <---------DOF5.7(2) <---------MYB59--------->ANAC58      <---------ARR14(2)      --------->YAB1<---------At4g35610   <-- ---------GT1   --------->ANAC58     <---------ARR14(1)   ---------->DOF2  <---------ARR11(3)-------- --->ANAC46    --------->WOX13(1)  <---------MYB59  <---------ANAC46<---------MYB59 --------->DOF5.7(2)   ttaccaaatcttatagccaatcaaccagattataataccgaatctaagagactggggtgagaaagaataacctacttgatctgctcgttaatggcggctt  16840000                                                                             ------>ZmHOX2a(1)   ======================bZIP_DOF                                           --------------------->WRI1   --------->TGA1a                             <------MYB83                 --------->TOE2(3) ---ARR14(2)                                   <------MYB46(1)              --------->TOE1(3) -RAP2.3(1)                                  <--------P               <-----------GT1               - -ATERF1(1)                                 <---------MYB52(1)   <---------DAG2                     - -ERF1                                  <---------At4g35610      <----------DOF2                ----- -->ARR14(2)                            --------->ZAT2      <---------ZAT2 ----------------->AGL2   < ============MYC_MYB                    --------->At4g35610 <---------At4g35610   --------->ANAC46 -- -------ZAT18       --------->ETT(2)    <---------ZAT2  <------ZmHOX2a(2)  <-----------------AGL3---- ->ATERF1(1)  <----------DOF2    --------->CCA1(2)      ============================HOX2a_HOX2a -----   cgcactcgtctgagtacttttgtcgagcgagtgagagatgagagctggtagggacgagatcgagctccttttttacttccttaaacggctcgaagacaac  16840100               --------->MYB55(2)               <---------MYB46(3)              <---------AtMYB61             <-------GAMYB            <---------MYB46(3)           <---------DEAR3(1)           <---------DREB2C(2)           <---------At1g77200           <---------DEAR4(1)                                     --------->LBD16 --------->CCA1(2)         <-----------HVH21                                       <---------HSFC1(1)         <xxxxxxxxxxxxxxxxxsmallRNA(si3)                         --------->HSFC1(1)<-------TEIL      <---------ANAC58                                           --------->HSFB2a(2)             <---      <---------ANAC58                                           <---------HSFB2a(2)             ----   ---------->CDC5                                              <---------LBD16   --------->ARR14(1) <----------CDC5<-------GAMYB                              --------->ARR11(3)    <---------ARR14(2) ----->NtERF2<---------MYB52(1)                            <---------ARR11(3)    --------->ARR14(2) -------->At4g35610                                        <---------GLK1(2)     --------->ARR11(1) ---->ANAC46<---------DEAR3(2)       ---------->DOF2       <---------ARR14(2)   <---------HSFC1(2) ---------At4g35610              --------->LBD16         --------->LBD16        --------->HSFC1(2) ------->DEAR3(1)               <---------ANAC46        <---------HSFB2a(2)     --------->HSFB2a(1) --->GAMYB<------NtERF2<----------DOF2                  --------->HSFB2a(2)     <---------HSFB2a(1) ---->DEAR3(1)--------->ALFIN1 <-------TEIL---------->DOF2 --------->ARR14(2)  ----------->ARR10 <---   gccgcttagcgcgtcggtggttgagcttttagatgcgcgaaaagagaaagttaagtttccagattttccagaagaaactcgaagattcgatgaaatggaa  16840200                              --------->AtLEC2                         --------->ANAC58   ---------->DOF2       --------->ANAC58          --------->At4g35610 ---MYB46(1)             --------->ANAC46          <---------ZAT2 ------->GT1          <---------REM1(2)            <---------At4g35610              --------->ANAC58 ---MYB83         ------>ZmHOX2a(1)   <-----------GT1     >>>>>>>>>TBF1             --------->ANAC58   ggtaacaaaggagacacatccttcttcacgccatggaaattcaccagcgagagagctgaagaagaagatgaagaaacagtcttgagaagcattttgactc  16840300                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                  <------ZmHOX2a(1)                                   <---------ANAC46         <-----           ---------->DOF2                                     <---------ANAC58         --------->DAG2     ----------->GT1           --------->HSFB2a(2)             <---------ANAC58        ---------->DOF2    <---------WOX13(1)         <---------HSFB2a(2)        *TSS <---------ANAC46--------->CCA1(2)   gtttggattgaaacaaagtaggaaagttttcttcgcgagaaaattggagaagacgaatggatttttcgtgaggcgagggagatatatgtaaaagtgagat  16840400                                            <---------TOE1(1)                                            <---------TOE2(1)                                           --------->SPL7                                         --------->TOE1(2)                                         --------->TOE2(2)                    <---------ANAC58                                         <---------SPL7                       <---------ANAC58                                   ------->MYC3                       <-------MYC3                                   <-------MYC3                       ------->PIF5                                   <-------MYC2                       ------->MYC3                                   ------->MYC2                       ------->MYC2                                   ------->MYC4                       <-------MYC2                                  --------->ANAC55(2)                 <-------PIF5                                  <---------ANAC55(2)                --------->ALFIN1                                  <---------ANAC46                   <------NtERF2                                  --------->TGA1a           <-----------HVH21<---------ZAT2                                  <---------TGA1a         <---------MYB46(3)--------->ANAC58      <--                                  <---------O2           --------->ALFIN1   --------->ANAC58      <--                      --------->LBD16  <---------------AtSPL3        <---------ANAC58             <--                    <---------At4g35610------->TEIL--------->TOE1(2) <---------TGA1a          <------                    <------NtERF2 --------->O2    ------>ZmHOX2a(2)  ==============================MYC_MYB          --------->ICU4          <--------ABF1  <------ZmHOX2a(2)   <---------ANAC58        <-------          <---------YAB1      --------->CCA1(2) <---------ARR11(3)   <---------ANAC46        <-------    --------->ALFIN1--------->At4g35610--------------->AtSPL3       ------>NtERF2          ------->GAMYB  <---------bZIP60(2)<---------ANAC46  --------------->AtSPL8      <---------ANAC46      <---------At4g35610  <---------ANAC46  <---------LBD16<-------MYC4 --------->ARR11(3) <---------ANAC58      --------->At4g35610 -------CBF       <---------DEAR3(1) ------------------>SPL14      <---------ANAC58<---------MYB46(3)   tgtgatgtgttgatgatgaggctgcggatgagagacacgtgtacgtacgagatcgtgggatgggtcatggcgcgtggcaagcttgtggttcaactgcgtt  16840500                               <---------ANAC58      <---------ANAC46      <---------AHL20(2)   <-------GAMYB          ----------->HVH21 -------ANAC58         <-----------RAV1(1)        <---------MYB52(1) -------ANAC46     <----------DOF2               --------->LBD16 -------ANAC58   ---------->ID1<---------ANAC58 <---------ANAC58          <---------AHL20(2) -GAMYB      <----------DOF2   <---------ANAC46 --------->ANAC55(2)   ----------->GT1       --------- --ANAC58  ---------->ID1 <---------MYB46(3)    --------->ANAC46    --------->At4g35610     <-------- --ANAC58 <-----------GT1---------->ID1         <---------ANAC58    <---------At4g35610--------->ANAC55(2)   gctggaattttttttctttttctttttgtcgttgctggaattttgtttatccgtgacttatttgttttgaagctgtataattttgttttatgtgatgaaa  16840600                                                    --------->ATHB12                                                    <---------ICU4                                                    <--------HAHB4                                                 --------->YAB1                                          <---------ANAC55(2)                                          ----------->GT1                                    --------->AHL20(2)                                <-----------GT1 <---------AHL20(2)                                --------->AHL20(2) <---------YAB1                         --------->ZAT6 <---------AHL20(2)            --------->RVE1(1)                      <----------DOF2   --------->AHL20(2)           --------->ARR11(3)                  --------->RVE1(1) <---------AHL20(2)      <---------AHL20(2)                 --------->GLK1(2)--------->ANAC55(2)      --------->AHL20(2)                 --------->ARR11(3)--------------->AGL15--------->AHL20(2)                          -                 <---------ARR11(3)<---------------AGL15<---------AHL20(2)                      -----                <---------GLK1(2) <---------ANAC55(2)  --------->AHL20(2)           <---------YAB1 -- -->GT1  --------->At4g35610    <---------AHL20(2) --------->ICU4    <---------ARR11(3)  ----------->GT1 -YAB1   <---------At4g35610 <---------ICU4 --------->AHL20(2)       --------->GLK1(2) <---------YAB1   attgaaattgcagcttcaaaatctctttcactaattacttaattaagtaaataatcatttatttaatagaaaatctcttgtaatttgtgattagtgaata  16840700                                           <---------YAB1                                          --------->AHL20(2)                                       --------->TOE2(3)                                   --------->ARR11(3)                                   <---------ARR11(3)     --------->MYB52(1)           --------->RVE1(1) ----------->GT1                  --------->CCA1(1)                                                -- -------->DAG2                 <---------AHL20(2)                         <------ZmHOX2a(1)        <- ---->AHL20(2)                <---------AHL20(2)            ---------->DOF2          <------MYB83 --- -------->DOF2                --------->AHL20(2) <----------ID1    --------->ZAT18   <------MYB46(1)   aaaaagttaacagaacaactaaaatactaaaattaaatatcccttaaaattggaacaaataagaaagagtgcataaggaaaacaatttggttttatgcaa  16840800                                       <---------YAB1            --------->ARR14(2)                               ----------->GT1                   <---------GLK1(2)                             <---------WOX13(1)                  --------->ARR11(3)                           --------->ATHB12           ------>ZmHOX2a(1)                        --------->ANAC58         --------->KAN4(2)--------->GLK1(2)                        <---------ANAC55(2)     --------->HSFB2a(1)                        --------->ANAC46  <---------WOX13(1)     <---------ARR14(2)    --------->AHL20(2)  --------->ANAC55(2)     <---------HSFB2a(1) ------->AHL20(2)       --------->ANAC55(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------AHL20(2)       --------->ANAC58--------->ATHB12  <------------CBF                          < ------>AHL20(2)   <----------ID1   --------->ICU4   --------->TOE2(3)         <------ZmHOX2a(1)    -   tttaaattaaaacaaacaaaaacaacaagtaattggtaaatatgattggcacattcctcaaattgaagattctgttttagaggagagaacaaaaaaaaaa  16840900  Previous    Next  AGI:  At2g40300.1    Description:  ATFER4 (FERRITIN 4); ferric iron binding. Identical to Ferritin-4, chloroplast precursor (FER4) [Arabidopsis Thaliana] (GB:Q9S756;GB:Q8WHW5); similar to ATFER3 (FERRITIN 3), ferric iron binding [Arabidopsis thaliana] (TAIR:AT3G56090.1); similar to ferritin [Chorispora bungeana] (GB:ABB22752.1); contains InterPro domain Ferritin, conserved site (InterPro:IPR014034); contains InterPro domain Ferritin-like (InterPro:IPR009040); contains InterPro domain Ferritin, N-terminal; (InterPro:IPR001519); contains InterPro domain Ferritin-related (InterPro:IPR012347); contains InterPro domain Ferritin and Dps; (InterPro:IPR008331); contains InterPro doma Range:  from: 16838371    to: 16840358    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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