Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->YAB1                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         --------->AGP1  <---------ATHB12                                                                         <---------ARR14(2)                    <---------ICU4                                       <---------ARR14(3)                    --------->ATHB12                                     <---------ARR11(3)      ------>ZmHOX2a(1)  ---------->DOF2           --------->ANAC58      --------->ARR11(3)  ------>ZmHOX2a(2) ----->ALFIN1       -------->ATHB1                 --------->ANAC58      --------->ARR14(2)<---------ARR11(3) --------RAV1(1)   <---------YAB1      <---------AHL20(2)                --------->ARR14(3)--------->ARR11(3) ---DEAR3(1)      <---------ARR11(3)   --------->AHL20(2)               <---------GLK1(1)--------->ICU4   tgttgctcctgtttcaacaaaatcattgaaagagaccccaaataaatatcaacaagaaaaccctagaaatttagagatcttcacatatgcaatgatcttg  16825200                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                    --------->DEAR3(1)                                                                                   --------->ATERF1(1)                                                                                  ------>NtERF2                                                                                  <---------ATERF1(1)                                                                             --------->ZAT2                                         --------->MYB46(3)                  <---------ZAT2                                         <---------MYB55(2)                  <---------At4g35610                                        --------->ANAC46                     --------->GLK1(1)                                        --------->ANAC58                     <---------GLK1(1)                                        --------->ANAC58         --------->ANAC58 --------->LBD16                                       ------>NtERF2   --------->ZAT2        --------->At4g35610              <---------AHL20(2)      <---------ALFIN1 <---------ZAT2 --------->ARR14(2)          <--              <---------YAB1          --------->DEAR3(1)         --------->ANAC58<---------DEAR3(1)              --------->AHL20(2)     --------->ATERF1(1)       ---------->DOF2  <---------LBD16------          --------->AHL20(2)       <---------PCF5  <---------ALFIN1   --------->ICU4<---------ANAC46     <-------TEIL              ----------->RAV1(2)<---------REM1(2)   <---------ARR14(2)      -------   atattgattcatatatataattgaaactcaactatctgggccacccaatctctccacagcttgaagaaagcaaatatggagctccggcgtccatcgcagc  16825300                            <---------ANAC55(2)                            --------->ANAC58                            --------->ANAC55(1)                            --------->ANAC46                            --------->ANAC58                            --------->ANAC55(2)                          --------->MYB52(1)                         ----------->HVH21                    <---------RAP2.6(2)                   --------->SPL7  ------>ZmHOX2a(1)                  <<<<<<<<<SPL7  ------>ZmHOX2a(2)                  <<<<<<<<<SPL4 <------ZmHOX2a(2)                 <---------SPL7--------->ARR14(2)               <---------------AtSPL3                        <---------MYB46(3)              <------------------SPL14                 --------->YAB1      <----------DOF2    <------NtERF2                 <---------ICU4 -------LBD16 <-------GAMYB<---------LBD16<---------YAB1    --------->ALFIN1     ==================== >NtERF2   <---------At4g35610 <---------ARR14(2)     <---------YAB1             ------>ZmHOX2a(1) -->DEAR3(1) <---------MYB46(3)<---------GLK1(2)   <---------YAB1     <---------ALFIN1   ctcggagtctttgagcggttgtacggcctcacggatcctccattcttcttgttctgatcatggtggtgactcccactctcttcctcatagctattgctag  16825400                 ------>ZmHOX2a(2)                 ======================HOX2a_HOX2a                <------ZmHOX2a(2)                <---------GLK1(1)                --------->GLK1(1)                =======================HOX2a_HOX2a               <---------AGP1               --------->ARR11(3)               --------->AGP1               <-----------ARR10                                                            <--------               <---------ARR14(2)                                                      <---------ANAC58               <---------ARR11(3)                                                      <---------ANAC46               --------->ARR14(2)                                                      <---------ANAC58              <---------CCA1(2)                                                     <--------P         ------>ZmHOX2a(2)                                                         <-------GAMYB         ==============================HOX2a_HOX2a              <---------ARR11(3)<---------MYB46(3)        --------->GLK1(1)                                    <----------DOF2      --------->MYB55(2)       --------->ARR11(3)--------------------->WRI1         <---------ICU4       <---------AtMYB61 ===============HOX2a_HOX2a     ------>ZmHOX2a(1)    ------>ZmHOX2a(1)    <---------YAB1<----------DOF2   atgggctctgatctccagatctctcttcttcatcctcttcgccttcttcatcatcctcttcatctttatcttcttcattcttggtggttgctttgatgtt  16825500                                         <---------ARR11(3)                                      <---------WOX13(1)                                      <----------DOF2                                     <---------ANAC58                                               <                                     <---------ANAC46                                      <---------TOE1(3)                                     <---------ANAC58                                      <---------TOE2(3)                                 <---------At4g35610                              <---------ANAC46--- -TOE2(3)                 <---------GLK1(2)------>ZmHOX2a(2)                 <-----------RAV1(1) <---   gttagatagacaagtcttggagttttcagaattttggctgcttgatctcatcttggtctctagctatttggctgtttttgtgttgtttgttttgaggttg  16825600                                              ================================HOX2a_HOX2a                                              <------ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR11(3)                                  <---------ARR11(3)   --------->YAB1 <----------DOF2        <---------LBD16      <---------ARR11(3)               <---------TOE1(3) ---------DAG2       <---------ZAT14        --------->YAB1                    <---------TOE2(3) ---->TEIL<---------CCA1(2)   ---------->DOF2--------->ARR11(3)        <------ZmHOX2a(1) --------GT1       <---------GLK1(1)     ---------->DOF2             --------->MYB59    <----------DOF2   aacctttttggtctatcttggagttctctggacaaagatcaaacaaagatcacacactcatacatatgtgttaggaatttaaggtgaagacttttgatgg  16825700                                <---------ICU4                               <---------ATHB12                     <---------ANAC58                                                               -                     <---------ANAC58 <----------DOF2                                           <----                     <---------ANAC46 <---------DAG2                                           ------           <----------DOF2   --------->WOX13(1)  <---------ALFIN1                       <---------YAB1           <---------DAG2<---------CCA1(2) <-----------GT1                           ------->TEIL   <   tctatgtgtatgactttttggatgcttgtatccatcattcctttttctccccctctctctccaactcaacatatatgttgaaatatgtatatgatggcaa  16825800                               --------->AHL20(2)                                               -----                               <---------AHL20(2)                                     <---------HSFB2a(2)  --------->KAN4(2)            <---------YAB1                                         --------->HSFB2a(2) <---------GLK1(1)          <----------DOF2                                          ------>ZmHOX2a(2) <----------TaMYB80         <---------DAG2                                          <------ZmHOX2a(2) --------->GLK1(1)   <---------AHL20(1)                                            <---------ARR11(3) --------->KAN4(1)   --------->AHL20(1)                                            <---------AGP1 <---------KAN4(1)   <---------AHL20(2)                           =================================== -------->ARR14(2)   --------->ARR11(3)    <---------ATHB12     <-------TEIL       --------->AGP1 -----At4g35610  <---------AHL20(2)    ------------>CBF ----------->GT1    ---------->DOF2    <------ --->MYB52(1)   --------->AHL20(2)    >>>>>>>>>>>>>>>>>LFY     <-----------GT1     --------->ARR11(3) ---------ARR14(2)  <-----------TBP<-----------GT1<-----------GT1 --------------->AGL15     <--------   cggatattctaaattctatttaatatatagctttttattacaccaatggttttttctacagttatatacatcttagggaaagatagatctagaattacac  16825900                            --------->AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)          --------------->AtSPL8    <---------------AGL15 --------->TOE2(3)                                 <-----------GT1 ---->ANAC46    <----------DOF2            --------->ZAT14           ----------->GT1                < ===================MADS_MADS       --------->YAB1           <---------AHL20(2)                     - -----GT1 <---------------AtSPL3 --------->TOE2(3)        ------->TEIL      <---------ICU4 <---------ICU4 ---GT1   <---------------AtSPL8<---------ICU4  --------->YAB1 <---------AHL20(2)       --------->WOX13(1)   ctcatgacaaaaatggtacttttaatttcattaaacattagtaacttcagtcataagatgtattttaaaatgagttaataactattaagtcaattagtac  16826000                                                                           <---------ICU4                                                                          <---------YAB1                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                        -------->HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                                       <---------YAB1                                                                       --------->ICU4        <------ZmHOX2a(2)                                                                     <---------ICU4         ---------                                ---------->DOF2                      --------->YAB1         <--------          ------->TEIL     ----------->GT1                          <---------AHL20(2)  ---------->DOF2 ---------AHL20(2) <---------YAB1                                   <---------ATHB51 --------->At5g28300 -------->AHL20(2) ----------->HVH21                       <---------AHL20(2)    <---------AtLEC2   aattaatctttgaatctcgttgtgatagggagtgaaaagaaattccaaggagtagattgaatttatctaaataatgatcattttcatggtaaaagatcaa  16826100  Previous    Next  AGI:  At2g40260.1    Description:  myb family transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G38300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73581.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 16823896    to: 16825551    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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