Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                 ----                                                                                                 ----                                                                                                <----                                                                                               ------                                                                                      --------->ANAC58                                                           ------->TEIL               --------->ANAC58                                                         <-------TEIL             --------->ANAC58  <                                                     --------->ICU4               --------->ANAC46  <                          <---------ICU4           ---------->DOF2                --------->ANAC58  -                      ------>ZmHOX2a(1)         <---------ANAC46                 --------->WOX13(1) <               <---------ICU4    <---------ZAT14----------->GT1                 ---------->DOF2<-----           ------>ZmHOX2a(1)     --------->ZAT14--------->YAB1                  =====================   ---------->DOF2   --------->TOE2(3)        <---------ARR14(2)               <------ZmHOX2a(2)<----   tctctaaaagttcctattcatttcctcaacattactgcattgtctgagtatcgtaaagatgcacatacttcggtttacacgatcaagcaaggcaagttgc  16784100          --------->At4g35610         ----------->RAV1(1)       --------->At4g35610       <---------At4g35610       <---------ZAT2   --------->LBD16 <---------LBD16 ---------ANAC46 ------->TGA1 ------->HVH21 -----ANAC58 --->At4g35610 ---------TGA1a ---------bZIP60(2)                            <-----------RAV1(1) -------->TGA1a                    --------->ATHB12 ---------O2                      <---------YAB1    <---------ANAC58 ----At4g35610                  <---------At4g35610 <---------ANAC58 =========bZIP_DOF <------ZmHOX2a(2)      <<<<<<<<<<<<<<<<<LFY         <-------TEIL                <- -----ANAC58      <---------ARR14(2) <---------WOX13(1)-------->P  ------>ZmHOX2a(1)      --------->ZAT14   tgacgcgggagcagcaaaacgatccagccaattttgctgattgcatacactggtgcttaccaggccttcctgatacatggaatgagtttctctatacaca  16784200                                                             ------->TEIL                  --------->GLK1(2)                       ----------->GT1               ----------->ARR10                          <---------ANAC46      <---------HSFC1(1)                                 <-----------------------TaNAC69(2)      --------->HSFB2a(2)                    <---------AHL20(2)             <-------TEIL      --------->HSFC1(1)       <----------DOF2     <---------ANAC58        --------->GLK1(2)      <---------HSFB2a(2)    ------>ZmHOX2a(1)     <---------ANAC58        --------->CCA1(2)      --- --------AHL20(2)<---------GLK1(2)           --------->AHL20(2)    <------ZmHOX2a(1)              ---   tattatttctcgaagatgagattctttcatcctcttttttggtttaaaaaaattcttgtgatgtatataggacagagattcaagggatttgaagttagcc  16784300                           <---------ZAT18                           --------->ZAT14                           <---------ZAT14                           --------->ZAT18                                           <---------ANAC46                         --------------->AtSPL8         <---------YAB1             <------MYB46(1)  <   ----------->GT1       <---------------AtSPL8   <---------GLK1(2)                <------MYB83  <--- ------>ANAC58         --------->DAG2             --------->ARR14(2)              --------->MYB111(1) ------>ANAC58        ---------->DOF2             <---------ARR14(2)      --------->ICU4         ----   aagtaaggctaaaaatttgttgaataaagtgtacaattcacagggaaacacagatactataatttcagtaaatgacaagattagtaggtgtgtattatca  16784400                                                                       --------->TOE2(3)               <---------ARR11(3)                               ------>MYB46(1)           ---------->DOF2                                      ------>MYB83     <------------CBF                                           ----------->RAV1(1)    --------->ATHB12                                          --------->MYB46(3)   <---------YAB1                                             <---------MYB55(2) --------->REM1(1)                                    ------>MYB83    --------->YAB1 -------TEIL   --------->ARR11(3)                     ------>MYB46(1)<-------TEIL ------At4g35610                            <---------YAB1    <---------MYB59 ----->At4g35610               ----------->GT1 <---------WOX13(1)   *TSS<---------YAB1          <----   gctacatgattgtaaaagatgttgaagtagttgaagttaaaacgttttgatagaccaactacgacccaacattcattaatgtcaaaaccaattttctcat  16784500                                            ---------->DOF2                                      <------NtERF2                                     ------>NtERF2                                    <---------bZIP60(1)                                    <---------ATERF1(2)                                    --------->bZIP60(1)                                    --------->ATERF1(2)                                   --------->RAP2.6(3)                                 ----------->HVH21         <----------DOF2      <---------ATHB12-----                                 ----------->TGA1   --------->At4g35610        <---------RAP2.6(3)           ------>MYB83<---------REM1(1) <------NtERF2    <---------DAG2    --------->ZAT14   -------           ------>MYB46(1)    --------->MYB52(1) ---------->DOF2    <----------DOF2    <<<<<<<<<TBF1 -----CCA1(2)   --------->MYB52(1)--------->MYB52(1)<---------At4g35610  <----------DOF2     --------   atcgccagaaaccgaacacaacgagatgaagcaaactgacggcagagaaaggaaagcttacctttctctgctatactttgcagtcattcttcttcccgta  16784600                                                                                                 ----                                          <------MYB83                                          -----                                        <--------P                                        <---------ZAT14                                       <-------GAMYB                                      --------->ZAT14                                --------->ZAT2                                          --------->ANAC58    --------->HSFB2a(2)         <---------ZAT2                                          --------->ANAC58    <---------HSFB2a(2)         <---------At4g35610                                     --------->ANAC46    <---------LBD16             --------->At4g35610     --------->GLK1(1)          --------->ANAC46 ---->ARR14(2)                  ----------->RAV1(2)   <------ZmHOX2a(1) --------->TOE1(2) <---------ZAT18 -->LBD16                     <-----------RAV1(2)  <---------LBD16--------->ANAC46 --------->bZIP60(2) ->ANAC55(2)              ---------->DOF2 <------MYB46(1)         --------->ANAC55(1)--------->ZAT14-   ttccttctcggatgctatctgtacaacgagaagcagctgagggttggccagtttcaggaattcaatacacataacctgcaagaacacatcactccactac  16784700                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                          <---------ALFIN1                                                                                      <-----------HVH21            --------->ARR11(3)                                                        <-----------TGA1     ---------->DOF2                                                                 <---------ANAC55(2)  --------->ANAC58                            <---------GLK1(1)                      --------->ANAC46  --------->ANAC58                  ---------->ID1                                   --------->bZIP60(1) ------->RAV1(1)                ------>ZmHOX2a(2)                                    <---------bZIP60(1) ---->REM1(1) ---------->DOF2 <---------ARR11(3)                  <------ZmHOX2a(1) <-----------STF1 --------->DOF2 <----------ID1--------->ARR11(3)   <---------------------WRI1      <---------DOF5.7(2)   aacaaagcaaagaagataaagacaagaagactgatcttgttccattagaattctgtgatgttttcacaggaaaatgggttcttgataacgtcacacatcc  16784800                                                 --------->ANAC46                                         <---------ANAC58                      --------->ARR14(2)                                         <---------ANAC46                      <---------ARR14(2)                                         <---------ANAC58                   --------------->AGL15                                      <---------DEAR3(1)                    --------->HSFB2a(2)------                                    <---------ANAC58                        <---------HSFB2a(2)------                                    <------MYB46(1)                         <---------------AGL15                                    <---------ANAC58--------->CCA1(2)      <-----------------AGL2                                    <------MYB83 --------->ANAC58          <-----------------AGL3                                   <---------MYB46(3)                      ----------------->AGL2    ---------->DOF2                --------->MYB55(2)      --------->ANAC58----------------->AGL3 -->ZmHOX2a(1)         --------->GLK1(2)<------NtERF2      --------->ANAC58----------------->AGL1 -------DOF2<---------YAB1        --------->ALFIN1  --------->MYB52(1)     <-----------------AGL1  <- ---->TOE2(3)  ------->TEIL  --------->YAB1      --------->ANAC58         --------->MYB52(1) --------   tttatacaaagaagatgaatgtgagtttctatcagagtgggtggcttgtacaagaaacgggaggccagactctaagtaccagaaatggagatggcaacct  16784900                             <----------DOF2                           --------->ZAT2                                                      <-----                           <---------ZAT2                                                     <------ --->TOE1(3)               --------->At4g35610               --------->ZAT6                  <------- --->TOE2(3)               <---------At4g35610 --------->ANAC58      <<<<<<<<<TBF1       <----------DOF2 --------YAB1    <-----------HVH21             --------->ANAC58 <----------DOF2         <------------ >P     <----------DOF2   <---------TOE1(2)--------->YAB1  <-----------GT1           <----------DOF2   caagattgctctttgccaaggtcagtcccagctttctgagaacaaaaataagcaaaatgaataacactttcttcttctctcaatattctttcttttttcg  16785000  Previous    Next  AGI:  At2g40150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41384.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 16782520    to: 16784321    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g40160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41384.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 16784468    to: 16786486    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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