Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->TOE2(2)                         <-----------ARR10                         --------->GLK1(2)                                                  <--------                         --------->ARR11(3)                                            <---------ANAC58                         <---------ARR11(3)                                            <---------ANAC46                     --------->YAB1                     ----------->GT1           ------->TEIL --->ATHB12         <---------ATHB12              --------->YAB1               --------->ANAC55(2) ----AHL20(2)     --------->WOX13(1)          <---------YAB1          ------>ZmHOX2a(1)<---------ANAC58 -->AHL20(2) --------->MYB46(3)             <-----------GT1    <-----------GT1 <---------ANAC55(2)   ttggttttctgtgaaaccatcaatcaaaatctacgtatgcttcatattacaataacaaatgttataaacatcctctaaaatatgtatttgtgtgttacta  16756700                                 <---------GLK1(2)                               <---------KAN4(2)                        <---------AtLEC2          <---------At4g35610                               <                    <----------DOF2  <---------YAB1                           --------->AHL20(2) ---- ---GT1     ---------->DOF2----------->GT1  <----------DOF2     --------->ANAC46            ---------   aacaaaaatatgagcaaagggtctttggatggaaatattctcatcgctttggagctaatacattacacacagatagacaattgaataagttaacaaaaga  16756800                        <---------WOX13(1)                       >>>>>>>>>ARR2             ---------->DOF2           >>>>>>>>>RAP2.2         <---------ARR11(3)                                            ----------->HVH21         --------->ARR11(3)                                          --------->At4g35610        --------->CCA1(1)       --------->WOX13(1)                   --------->ZAT2               <-- ----------ID1        --------->ATHB12                               <---------ZAT2   <----------DOF2 ----->CCA1(2)       <---------YAB1                                  <---------At4g35610    <-------- ->DOF2 --------->RVE1(1)<---------MYB46(3)              <----------ARF1         <-----------GT1 <---   taagaacaaaatatctaaagagtttgattgttagcaatctattgacaaaatagttaggggagacaagttggagctgacatatttgactctttttctttgc  16756900                                          <-------TEIL                   <---------ANAC46    <---------ZAT2           --------->ANAC58            --------->ZAT2              ------>ZmHOX2a(2)           --------->ANAC46      ------->GAMYB                   <---------ARR11(3)         <---------DOF5.7(2)     --------->YAB1                  --------->ARR11(3)        <---------WRKY38(1)     --------->MYB46(3)         --------->ZAT14              ----------->RAV1(2)        <---------WRKY45      --------->WOX13(1)         --------->At4g35610          <---------ALFIN1   <---------YAB1  <---------ANAC58    <---------At4g35610 <------ZmHOX2a(2)         <---------ZAT18 --------DOF2      <---------ANAC58 ---------->DOF2      <---------At4g35610    <---------At4g35610 --DOF2 <---------WRKY12---------->DOF2--------->At4g35610 <---------ZAT14      <-------GAMYB ------DAG2--------->ANAC58  <---------WRKY12        <-----------HVH21          --------->At4g35610   cttttatgagtcaacgctatgacttgaaaagtcaaccatcaagctgcattagaccagtcagatcagtgatcttctctatttcagttgtccacctgaatag  16757000                    <---------GLK1(2)                                                           <----                   <---------At4g35610                                                          <----                   --------->At4g35610                                               >>>>>>>>>>>>>>>>                 <-----------RAV1(2)                                                <-----------GT1               <-----------HVH21                                                ------>ZmHOX2a(1)----             <---------ARR11(3)                                             <---------ARR14(2)  <----             --------->ARR11(3)                                             --------->ARR14(2) <-----           --------->ICU4                                                --------->MYB46(3)  <-------         ---------->DOF2    <---------GLK1(2)                         <---------WRKY38(1) <---------ATHB12       <---------RAP2.6(3)  --------->ARR14(2)                        <---------WRKY45------------>CBF      ----------->GT1       <---------ARR14(2) --------->ALFIN1       <---------WRKY12--------->MYB46(3)      --------->RAP2.6(2) ----------->ARR10---------->DOF2           --------->WRKY18(1)--------->MYB52(1)   ctaataggccgtaaagatgtcagatgctcagatttggaggcccattaaagtgttgagaaaatgtggttttggtcaacaaatccttttaaccaatggtggc  16757100   <---------ANAC58                                                                              ----   <---------ANAC58                                                                      <----------DOF2 -----ANAC58          ---------->DOF2                    <---------ANAC58                <---------DAG2 -----ANAC46  ------>MYB46(1)                            <---------ANAC58            <---------ZAT18 >LFY         ------>MYB83                             <------MYB46(1)               <---------ZAT14 ----------------->WRI1      <---------At4g35610       <------MYB83                  --------->ZAT14 -----ANAC58 *TSS ----------->RAV1(1)                <--------P                 <---------MYB111(1) -NtERF2    <---------MYB59  --------->At4g35610  <---------YAB1           <---------At4g35610 ------ --RAP2.6(2)--------->AtMYB61<-------GAMYB        <---------AtMYB61        --------->At4g35610-------   ttagtgcttactgaccaaacccacaaaagtcagttgatcagtcttctctgtgatggtaggcttgtttcttcattttctgctaactactacacttttcccc  16757200         <---------At4g35610         --------->At4g35610         --------->ZAT2                                                                         <----         <---------ZAT2                                                                         -----  <---------ZAT14                                                                  ---------->DOF2  --------->ZAT14                                                               --------->TOE2(3) ------>DOF2                            --------->YAB1                          --------->TOE1(3) --->LBD16                             --------->AHL20(2)                <-----------GT1     ------>ZmHOX2a(1) -------->AGL15           <---------------AtSPL8                  <-----------GT1------>ZmHOX2a(1)   aaagtgtagttagctgagataacacattgaggtccaaacaaataataagcgaatggagttggacaaattgacaattttctctccttaaatccatcctctt  16757300          --------->YAB1          --------->TOE2(3)             <----------DOF2        <---------YAB1             <---------At4g35610             <---------YAB1   --------->ANAC46               <---------ARR11(3)            --------->ICU4 --------->ANAC58          --------->CCA1(2)                    <---------YAB1 --------->ANAC46         --------->ARR11(1)          <---------ANAC58 <---------ALFIN1         --------->ARR11(3)          <---------ANAC46            ------->GAMYB     - --------->ANAC58         <---------ARR14(2)       <---------MYB52(1)     <<<<<<<<<TBF1       <------ -----REM1(2)           <---------TOE2(3)   <---------YAB1   <---------YAB1      --------->ANAC46   - ---->ZAT14     --------->TOE2(3) --------->ARR11(3)  <---------ANAC58 <<<<<<<<<TBF1          -------   cacacacatcattcttaacctatattgagatatggagagcttctttatcatccgttgcttcttgttattattcttcttcttcaacggagcatttgcagct  16757400                                             <---------LBD16                                     <---------ANAC58                                     <---------ANAC58                                --------->CCA1(2)                               <---------ARR14(2) -------->ANAC58               --------->ARR14(2)                               --------->ARR14(2) -- ---At4g35610               --------->ETT(1) --------->LBD16              <-----------GT1       ----- -------->ANAC58            <---------ANAC46<---------ANAC46          --------->ICU4           <----- -->At4g35610             <-----------HVH21<---------LBD16        --------->LBD16       <----------DOF2   tcaagtaagttatggagcataagagagatgtcggatatggctggctacggggaacacaaactctcatccgtagttatcaccggttctcttctttgcaaca  16757500                        <---------ANAC46                        <---------ANAC58                   <---------ALFIN1                                                                --       <---------TOE1(3)<---------ANAC58                                                           <-      <-----------RAV1(2)  <---------ANAC46                                                        <- --------->RAV1(2)<---------REM1(2)    --------->YAB1                      <---------ZAT14      <---- -->GAMYB         --------->ZAT14     <---------ATHB12                     --------->ZAT14   <------- ----ALFIN1       <---------ZAT14   --------->GLK1(1)                  --------->ATHB12   <---------AHL20(2)   cccctgtttcaggtattctctacactgcgtcttgtgagaaatcataaacttctaattcaaaatcaattgaaaatgagtgaagagaactatattttatgct  16757600  Previous    Next  AGI:  At2g40110.1    Description:  yippee family protein. similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT3G11230.1); similar to yippee family protein [Arabidopsis thaliana] (TAIR:AT3G11230.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41344.1); contains InterPro domain Yippee-like protein (InterPro:IPR004910) Range:  from: 16755018    to: 16756623    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g40113.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47635.1); similar to hypothetical protein 31.t00008 [Brassica oleracea] (GB:ABD65108.1) Range:  from: 16757113    to: 16758162    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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