Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ------->GAMYB                                                                      -------->P                                                                   <---------MYB52(2)                                                                   <---------MYB46(2)                                                                 <-----------GT1                                                                --------->AHL20(2)                <---------At4g35610                          <---------ICU4                --------->YAB1         <---------YAB1                   <---------YAB1    --------->AHL20(2)          --------->YAB1       <--------HAHB4                  --------->AHL20(2)   --------->ICU4    --------->ARR14(2)       <---------ICU4            ------->GAMYB              <---------AHL20(2)<---------ARR14(2)      <---------YAB1           --------->At4g35610    ----------->GT1--------->MYB52(1)<-------TEIL<-  --------->ANAC55(2) ---------->DOF2  <---------AHL20(2)   <---------ATHB51 --------->GLK1(1)<------ --TOE2(3)<-----------GT1     --------->MYB52(1) ---------->DOF2<---------AHL20(2)------>ZmHOX2a(1)<-   ttttaagtattattactcagcatataaagaaacaactgaaatttataaatagaaagtggaaaataattaactaacccacaaatcctatattcatcaaaat  16749700                                                 --------->TOE2(3)      <------ZmHOX2a(1)                                                --------->YAB1         <---------YAB1                                      ------>ZmHOX2a(2)               <---------TOE2(3)                                    <---------AGP1               --------->AHL20(1)                                    --------->ARR11(3)           <---------AHL20(2)                                    <---------ARR11(3)           --------->AHL20(2)       <------ZmHOX2a(1)            <---------ARR14(2)       --------->AHL20(2)     <---------TOE2(3)              --------->ARR14(2)       --------->YAB1 --------YAB1    --------->YAB1    <---------CCA1(2)   <---------ARR11(3) ---ICU4 ----------->GT1  --------->AHL20(2)   <---------ATHB12 --------->AHL20(2) --------ANAC55(2)        <---------AHL20(2) --------->WOX13(1) <---------AHL20(2)             <-----   tatgtatgaggatgtaatttcataacatataaattgtggatctgtatcaatcgtcaatatcaataaaaaaattaggatagatcgacgaatgaattgactt  16749800               <----------DOF2            --------->GLK1(2)         <---------YAB1             --------->ATHB12           --------->MYB46(3)        <---------TOE1(2)          <---------YAB1       <---------AHL20(2)       <-----------GT1    --------->WOX13(1)           --------->AHL20(2)    <---------At4g35610  <---------AHL20(2)            <---------AHL20(2)           ----------->GT1 <    --------->At4g35610  --------->AHL20(2)     --------->ANAC58              --------->HSFB2a(2)  <-  --------->YAB1        --------->AHL20(2)      --------->ANAC58              <---------HSFB2a(2)  <- -----DOF2 <---------GLK1(2)     --------->YAB1 --------->ANAC46   ------->GAMYB  ---------->DOF2  --   tcattcatcttacgattcttttaaaaattaatcaaacatgatttacatacaagaaaattaaatcaacaacgaaaacatttatagaaaagaaatattcaaa  16749900                              <---------AHL20(1)                              --------->AHL20(2)                              <---------AHL20(2)                              --------->AHL20(1)                             <---------AHL20(2)                             --------->AHL20(2)                             --------->YAB1                            <---------YAB1                          --------->YAB1                          <--------ATHB1                          -------->HAHB4                          --------->ATHB51                          <---------ICU4                          <--------HAHB4                         <---------ATHB51                         <---------YAB1                       --------->YAB1                      <---------AHL20(2)                <---------AHL20(2)      --------->HSFB2a(2)--------->AHL20(2)                                          ------>MYB83      <---------HSFB2a(2)--------->ICU4                                      <---------ICU4   <---------YAB1     --------->AHL20(2)                               ----------->GT1  --------->AHL20(2) <---------AHL20(2)                        --------->CCA1(2)   <---------MYB46(2) ---------RVE1(1)    --------->AHL20(1)      <---------GLK1(1)<---------ARR11(3)   <---------MYB59 --------GLK1(2)--------->AHL20(2)--------->AHL20(2)      ---------->DOF2   --------->ICU4 --------ARR11(3)    --------->AHL20(2)      --------->GLK1(1)--------->ARR11(3)<-----------GT1   --- ------->ARR11(3)<---------AHL20(2)<---------AHL20(2)----------->GT1  ----------->GT1------>MYB46(1)   agatttttatagaaagaataaaatttaataattatattatatagaagaaatccataggtaaaaagatatagacagataaaaattaccaaactaatccaaa  16750000                                                                                           <---------RAP2.6(3)                                                                                           ------>NtERF2                                                                                           <---------                                                                                           <---------                                                                                          --------->ANAC46                                                                                          --------->RAP2.3(3)                                              ----------->GT1                            --------->RAP2.3(1)                                           --------->YAB1                              --------->DEAR3(1)           <---------AHL20(2)             <---------YAB1                            <---------ICU4           ----------->TBP              --------->YAB1        <---------MYB52(1)   <---------YAB1<---           --------->AHL20(2)   ----------->GT1        <---------AHL20(2)        --------->YAB1  <---      <-------TEIL             --------->ANAC58       --------->AHL20(2)      --------->YAB1<------NtERF2 ------>GLK1(2)<---------ICU4  --------->ANAC58    --------->AHL20(2)    --------->TOE2(3)--------->DEAR3(1)   attctatattcatataaatattccaagtccaacaaggaaaaatcataatagtataaattaatcccttagtatttatcttagcatcatcatcgccgtcatc  16750100                                                --------->ARR11(3)  <----------DOF2                               <---------ARR11(3) *TSS                                         <---------HSFC1(2) --TGA1                 <-----------GT1       --------->HSFC1(2) --HVH21         <----------DOF2           --------->LBD16            ------>ZmHOX2a(1) --------HVH21  <---------DAG2            --------->ANAC46        <---------ARR14(2) --------TGA1<---------ALFIN1     ---------->DOF2                 --------->ARR14(2)         --------   gtcactttgtctcgtccaccttttaaaaaccctctctaaagtctccgaaacatcttctctcttaaacaaatcctctctgattcgatgggttttagcaaag  16750200                             --------->At4g35610                          <<<<<<<<<<WRKY26                          <<<<<<<<<<WRKY38                          <<<<<<<<<<WRKY43                       <---------AtMYB61                                                          ---     ----------->GT1 <----------DOF2          --------->YAB1                          <-----------GT1 -->DOF2        ---------->DOF2           <------ZmHOX2a(1) <---------MYB52(1)    <----------DOF2 <--   aagagattagtaaaaccagaaagctttggtcatctctatggagaggaatcaaaactatattcgttttgttcacaatgttcttctcttttctccttgtctc  16750300                                                                     ------>NtERF2                                                                   <------NtERF2                   ------>NtERF2                                   --------->RAP2.3(1)                  --------->DEAR3(1)                               --------->ATERF1(1)                  <---------DEAR3(1)                              <---------ATERF1(1)                <---------ATERF1(1)                               ------>NtERF2                <-----------HVH21                                <---------ATERF1(2)                ------>NtERF2                          <----------DOF2               --------->DEAR3(1)                   --------->DEAR3(1)               <---------DEAR3(1)                   <---------ALFIN1--------->DEAR3(1)             <-            --------->ANAC46                     --------->AtMYB61<---------RAP2.3(1)              --           ------>ZmHOX2a(1)                    --------->MYB46(3)--------->LBD16               <----    --------->ARR14(2)                         ------>ZmHOX2a(1) --------->ATERF1(2)        ------>MYB83   ------>ZmHOX2a(1) --------->DEAR3(1)       --------->ANAC46   --------->DEAR3(1)         ------>MYB46(1)   <---------CCA1(2)<------NtERF2       <---------At4g35610     <---------LBD16           --------->MYB46(3) ------>At4g35610--------->ATERF1(1)    --------->At4g35610     --------->ATERF1(1) --------->At4g35610 -------At4g35610<------NtERF2  ------>ZmHOX2a(1)<---------ALFIN1<---------DEAR3(1) <---------At4g35610   tgctcctatcttcctcgccgtcgccgatgctctcctcccttccgctctcctccaccgcttctcttcgccggcgactctctcttctcatctcaccaactac  16750400                                                <---------At4g35610                                                --------->At4g35610                                                --------->LBD16                                              ------>ZmHOX2a(2)                                             --------->CCA1(2)                                             <------ZmHOX2a(2)                                             --------->ARR14(1)                                            <---------ARR14(2)                                            --------->AGP1                                            --------->ARR14(2)                                            --------->ARR11(3)                                       --------->TOE2(3)                                      <--------HAHB4      <---------ALFIN1                --------->YAB1     <---------MYB52(1)               -------->ATHB1    <-----------HVH21                 <---------ICU4    <-----------TGA1                  --------->ATHB12   --------->ANAC55(2)               <---------ATHB12   --------->ANAC46                  --------->ICU4                           <-------TEIL --------GLK1(1)                   --------->WOX13(1)                        --------->CCA1(2) ------->GLK1(1)                --------->TOE2(3)                       ---------->DOF2 -----YAB1                <----------DOF2 ----------->ARR10     ----------->GT1     <----------DOF2   gatttccgtcactccctcatcgatattcctttaatctcaatcattagatccgctgttatactctgtgagtaaaaaaaagattcaaactttacaaaaccca  16750500                                                                         <---------ANAC58                                                          <----------DOF2<---------ANAC46           -    --------->MYB52(1)<---------MYB52(1)              <---------CCA1(2)  <---------ANAC58          <-   aaaaaaaaacagagcaattgctctgtttgctctgtttctgaagaaatcgaaaactcatttctttagtttgatttttcgtgtaaacaggtgtttatggact  16750600  Previous    Next  AGI:  At2g40095.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55880.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO41350.1); contains domain PTHR10992 (PTHR10992); contains domain PTHR10992:SF2 (PTHR10992:SF2) Range:  from: 16750101    to: 16752222    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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