Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->AHL20(1)                                                                                   <---------AHL20(1)                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(1)                                       --------->MYB46(3)            --------->ANAC58       --------->At4g35610           ------>MYB46(1)                 --------->ANAC58       <---------At4g35610           ------>MYB83              ----------->RAV1(1) --------->ARR11(3)   --------->TOE1(3)              --------->ANAC58            --------->ANAC46  --------->AHL20(2)   --------->TOE2(3)              --------->ANAC58          --------->ZAT6    --------->AHL20(2) ---------WRKY18(1)               --------->ANAC46    --------->GLK1(2) --------->TOE2(3) ----YAB1                   --------->At4g35610   --------->YAB1     --------->ANAC46             ---   tttgaccttagctctctcactgcttccctcagccaaacccaacaacgagtactcataatctaacacaacacaaaccacaaaaatatatattgattcaact  16747000                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                             ---------->DOF2                                                                   <---------YAB1            <-----------HVH21                                     --------->YAB1   --------->ARR14(2)                 <---------AHL20(2)      --------------->AGL15             -----   <---------ARR14(2)                 --------->AHL20(2)  <----------DOF2  <---------ZAT14     ------  <---------GLK1(1)               --------->ICU4     ---------->DOF2       --------->ZAT18  --------- ------>AtLEC2                   <---------TOE2(3)--------->TOE2(3)<---------TOE2(3)        ---------   atgcaaatcccaattgtcagaaattgaaaacgattaatgtttaattccacaaacttaaagctttccaataagattagtgcaaagccagtctcattaatca  16747100                                                                        ------>ZmHOX2a(1)         ---                                                                        <----------DOF2   <---------SPL1(2)                                                                       --------->TOE2(3)  <---------SPL7                                                                       --------------->AGL15      ---                                                                       <---------------AGL15    -----                        ----------->GT1                              <---------YAB1      --------->ANAC55(2)                       --------->DAG2                               <-----------GT1      <---------ANAC58 ----->DOF2          ---------->DOF2                          ----------->GT1            <---------ANAC58 --->YAB1   <---------ATHB12                          <---------ATHB12<-----------------AGL3--------- >YAB1    ------>MYB46(1)                    ----------->GT1---------->DOF2             ------------- >WOX13(1)------>MYB83--------->DAG2     ---------->DOF2 <---------ANAC55(2)          <-----------GT1   aagcacagaaccaaatcaattgaaaaaggtgaaatttaggcattgaagcgaaacaaatcatgtaaagtattatcctttaatggtttagtttccgtaccga  16747200                   ------->GAMYB                <---------DOF5.7(2)                --------->MYB52(1)               ----------->HVH21               <---------ARR14(2)              <------NtERF2             <---------DEAR3(2)             <---------MYB46(3)            <---------DEAR3(1)            <---------ANAC46           <------NtERF2           <---------ABI4(1)          <---------ERF1          <---------DEAR4(2)                                                                        <          <---------RAP2.3(1)                                                                       <          ------>NtERF2                                                                             <          <---------RRTF1(1)                                                                        -          <---------ATERF1(1)                                                                       <         --------->ATERF1(2)                                                                        <         --------->ALFIN1                                                                           <         <---------RAP2.6(2)                                                                        <         <---------RAP2.3(3)                                                                       <-         <---------DREB2C(2)                                                                       <-         <---------RRTF1(3)                                                     <---------At4g35610<-         <---------RRTF1(2)                                                     --------->At4g35610<-         <---------RAP2.3(2)                                                  <---------WRKY12     <-         <---------DEAR3(1)                                               <---------MYB46(3)       <-         <---------ATERF1(2)                                        <-------GAMYB                  <-        <---------ABI4(1)<---------LBD16                           --------->MYB55(2)              -- ------>ANAC58--------->DOF5.7(2)                                  <---------MYB46(3)   --------->ANAC58 ------>ANAC58--------->At5g28300                     ---------->DOF2  --------->ATHB12 --------->ANAC58 ----->DOF2--------->ATERF1(1)               --------->ALFIN1      --------->MYB111(2)<------ZmHOX2a(1) >SPL7  --------->ATERF1(1)          --------->MYB52(1)           <--------P<-----------HVH21<------- -->AtSPL3<---------ORA47(2)        <---------SPL7  <-------TEIL <-------GAMYB<---------WRKY38(1) ---   aagcaatagaggcggcggtaacggtattgcggtagagacgaacggggatggaggtgcaaagcttgagggttgttgatgggtcatcggaggaagcaatgaa  16747300           --------->AtMYB61           --------->DEAR3(1)           <---------ALFIN1          <---------MYB55(2)          --------->MYB46(3)        --------->ARR14(2)        <---------ARR14(2)       <------NtERF2      --------->LBD16     --------->RAP2.3(2)    --------->ATERF1(1)    --------->RAP2.3(1)    <------NtERF2    <---------LBD16   <---------RAP2.6(1)   ------>NtERF2   <---------RRTF1(1)   <---------ERF1   <---------RAP2.3(1)   <---------ATERF1(1)  --------->RAP2.3(2)  <---------DEAR3(1)  --------->DEAR3(1) --------->RAP2.3(1) --------->DEAR4(2)                                                               <------ZmHOX2a(1) --------->ORA47(2)                                                             <---------TOE2(3) --------->ATERF1(1)                                                      <------NtERF2 <---------ABI4(2)                                                       ------>NtERF2 --------->ERF1                                                          <---------RAP2.6(3) --------->RRTF1(1)                                                     --------->RAP2.3(2) --------->RAP2.6(1)                                                    >>>>>>>>>AtERF-3 <------NtERF2                                                          --------->RAP2.3(3) ---------RRTF1(1)                                                      --------->RRTF1(3) ---------ERF1--------->DEAR3(1)         --------->ZAT2                 --------->RAP2.6(2) ---------RAP2.3(1)                      --------->At4g35610            --------->ATERF1(2) ----->NtERF2--------->ANAC46            --------->HSFC1(2)             <---------bZIP60(1) ---------ORA47(2)                       <---------HSFC1(2)             >>>>>>>>>AtERF-4 ---------DEAR4(2)              --------->MYB46(3)                      --------->DEAR3(1) ---------ATERF1(1)            ------>MYB46(1)                          <---------ATERF1(2) ---------RAP2.6(1)      <---------SPL7  --------->HSFB2a(1)           --------->ERF1 --------DREB2C(2)       <------NtERF2  <-----------ARR10              --------->RAP2.3(1)       ---- --------RAP2.3(2)      <---------DEAR3(2)  <---------------AtSPL3    --------->SPL7             ---- --------RAP2.6(2)     --------------->AtSPL3       <---------GLK1(2) <---------ATERF1(1)       ----- --------RRTF1(2)      --------------->AtSPL8  <---------SPL1(1)   <---------ANAC58     --------->ANAC58 --------DEAR3(1)      <---------DEAR3(1)<---------HSFB2a(1)       <---------ANAC58     --------->ANAC55(2) --------RAP2.3(3)    <---------------------WRI1--------->SPL7     ======================HOX2a_HOX2a- --------RRTF1(3)   --------->DAG2     ===================================HOX2a_HOX2a   --------->ANAC55(1) ------->ALFIN1--------->LBD16 ------>MYB83 <-------TEIL           ------>ZmHOX2a(2)    --------->ANAC58 --ATHB12 <---------ABI4(2)   --------->ANAC46<---------SPL7     <---------ARR14(2)     --------->ANAC46 ------>ATERF1(1)  ---------->DOF2     <------ZmHOX2a(1)         --------->ARR14(2)     <---------ANAC55(2)   ggcggcgccggaaccaccgcataaggcggtaccaacaacgaggagcttcgtacgggttctccatagggatcgtgccgccattgaggaagcacgtaatgaa  16747400              ------>ZmHOX2a(2)            <---------ARR14(2)        <---------ZAT2                                                                              -        <---------At4g35610                                                                        <-      <-----------RAV1(2)                                                                         <-- --------->ANAC46                                                                                 <-- --------->ANAC58                                                                               ----- --------->ANAC58  <------ZmHOX2a(1)                                                     <---------LBD16 ----->ANAC58=============HOX2a_HOX2a                                           ------------>CBF<---- ----->ANAC58<------ZmHOX2a(2)                              <---------ETT(1) <---------ANAC58  <----- -->TEIL--------->At4g35610 ---------->DOF2        ----------->GT1           <---------ANAC46 ------- ------>TEIL--------->ARR14(2)                  *TSS    --------->KAN4(2)    <---------ANAC58 -------   cgcacgcctcagcagatcggaggagaaatagaaagcgagcgagcgaaaacaagtggtttattccgacaaggctaaatttgcgttcaatttgttcggaaga  16747500         <------ZmHOX2a(2)        <---------ARR11(3)        <---------AGP1        --------->ARR14(2)        --------->ARR11(3)        <-----------ARR10        <---------ARR14(2)       <---------ARR14(1)       <---------CCA1(2)  <---------GLK1(2)  <---------ARR14(2)  --------->ARR14(2) -------->LBD16 --------ANAC46                  <------------CBF -------LBD16                   --------->ATHB12 -----TEIL------>ZmHOX2a(2)   --------->ANAC55(2) ---->ARR11(1)            <----------DOF2                                                           - -----ARR14(2)          <---------PCF2 <---------ANAC58 <-------GAMYB                <---------ANAC46 ----HSFB2a(1)         ----------->TCP11(1)            <---------ANAC46            --------->ALFIN1 < ---->ARR10          --------->ALFIN1  <---------ANAC46<---------ANAC58     --------->TOE1(2)      -- --->TaMYB80       <-----------RAV1(1) <---------ANAC58<---------ANAC58     --------->TOE2(2)<-------   tgcggattcggatcttgtttgatgtgggccttacttattgggcttgtaatgggtctggcgttggactattctttgaaaactacgagtgtgtgtatttacg  16747600                                     --------->ARR11(3)                                   <---------YAB1                                 -------->HAHB4                                 <---------ICU4  <---------YAB1                 --------->YAB1 -------->YAB1                  --------->ICU4 ----------->GT1     <------ZmHOX2a(1)               <- ---------ICU4            <-----------GT1     <---------AtMYB61 <---------LBD16                   --- ------->ICU4    --------->MYB59<---------ATHB51     <-----------GT1                          ------- ----GT1     <---------ZAT6   <---------ICU4<---------ANAC46    <-----------RAV1(2)         ---------   aattatgaattcatagagttaggctaaattactaattatgattttggtgtggttttaacaattgtttcaggataaacagttttaaacatgaaaataaaga  16747700                               <---------YAB1                             <---------AHL20(2)                             --------->AHL20(2)           <-----------GT1                             --------->ATHB51      <---------ANAC58 --------AHL20(2)        <---------YAB1            <---------ANAC58                               --- ------>AHL20(2)   <----------DOF2            >>>>>>>>>EIN3                                  -------- ---->GT1      ---------->ID1<---------ICU4 <-----------GT1                              <-----------GT1 ->DOF2  <---------AHL20(2) --------->ICU4<---------AHL20(2)                        --------->AHL20(1)   taaaatttgaattttttgtttctttttctaattatttttgatatttatacattgctagttatacattacatttgtctaatatcacatatattaacaaaag  16747800                  --------->ATHB12                  -------->HAHB4                 --------->ICU4                 <---------YAB1       --------->AHL20(2)                                 <---------GLK1(2)       <---------AHL20(2)                               <---------AHL20(1)       <---------YAB1                                   --------->AHL20(1)    --------->AHL20(1)                                  <---------ARR11(3)    <---------AHL20(1)                           <---------YAB1   <----------DOF2           --------- -------->GT1    <---------ATHB12     --------->ICU4    --------->ARR11(3)                  --------- -->DOF2   --------->YAB1             <---------YAB1 --------->AHL20(2)         <---------YAB1   atgtaatatataattagaaatgattgtgagaaaaatggagattattgtattttgataaaatattctctcttttctagttattttgatataaaactcgtaa  16747900  Previous    Next  AGI:  At2g40090.1    Description:  ATATH9 (ABC2 homolog 9). Identical to Putative ABC1 protein At2g40090 precursor [Arabidopsis Thaliana] (GB:O04212;GB:Q8LET1); similar to ABC1 family protein [Arabidopsis thaliana] (TAIR:AT1G65950.1); similar to hypothetical protein OsI_012743 [Oryza sativa (indica cultivar-group)] (GB:EAY91510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41351.1); similar to putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:AAO38450.1); contains InterPro domain ABC-1 (InterPro:IPR004147); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 16744544    to: 16747448    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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