Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->ATHB12                        <---------ANAC58       <---------ICU4                          <---------ANAC46      <---------YAB1                      --------->YAB1                           <---------DEAR3(2)      --------->ICU4                     <---------YAB1                           <---------MYB46(3)    <---------ICU4                 <---------DAG2                   <---------GLK1(2)    --------->YAB1                 <----------DOF2     --------->LBD16           --------->SPL7   <---------ATHB12             <---------AHL20(2)     ----------->HVH21       <---------SPL7 --------->WOX13(1)             <-----------GT1<---------ANAC58<-------TEIL  --------->DEAR3(2)   cgacaatcatcattgcaatacaaaaactaaacatttactttatatcatagcttgaaccggacagattcaaaattctcaaaccggccggtccaactaagaa  16741600                                             --------->AtMYB61                                             <---------ALFIN1                                            --------->MYB46(3)                                          --------->DEAR3(1)                                          --------->AtMYB61                                         --------->MYB46(3)                                       <---------ALFIN1                                      --------->At4g35610                                      <------NtERF2                                      <---------ZAT2                                      <---------At4g35610                                     <---------ATERF1(1)                                  ------>NtERF2                                  --------->LBD16                                 <---------HSFB2a(2)                                 --------->HSFB2a(2)                                 <---------ATERF1(2)                                 <---------RAP2.6(2)                     ---------->DOF2                                 --------->ATERF1(2)                  --------->At5g28300                        --------->ARR11(3)<---------ALFIN1 <---------MYB52(1)                <-------TEIL    <---------LBD16--------->MYB46(3) <---------ALFIN1             --------->LBD16  <---------ARR14(2)     ----------->HVH21--------->LBD16           <---------LBD16    --------->ARR14(2)--------->AtMYB61--------->MYB46(3)   gaaacaatttgattccggttcattaagctctagttccggcagcaccaccaccatcgtgaccgttcttcccaccgtgaaagcccgacgagaaactagtatt  16741700                                                           <---------HSFB2a(1)                   <---                                                      --------->ANAC46                         <-----                     --------->TOE2(3)                --------->ANAC58                      <------MYB46(1)                     --------->TOE1(2)    --------->ARR11(3)                                <------MYB83                 --------->MYB46(3)  <---------MYB52(1)    --------->HSFB2a(1)             <---------MYB46(3)                 <---------MYB111(2)<-------GAMYB     --------->ANAC58                  --------->ATHB12 <------ZmHOX2a(2)------->GAMYB    <---------ANAC46 ---------->DOF2           --------->ANAC46<------   gagatcagaatacatgttaacaaccttggaaatgtttccgttgagttcttgaatcaaagcaacgttcttcgacatgttatcagccattctcgattggtga  16741800                                                                                           ==========                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          ===========                                                                                       --------->LBD16                                                                                <---------ALFIN1                                                                        --------->GLK1(2)<---------ARR14(2)       <---------ANAC58                                                <---------ARR11(3)--------->ARR14(2)       <---------ANAC58                                                <---------ARR14(2)<-----------ARR10    --------->WRKY38(1)                                                --------->ARR14(2)<---------GLK1(2)    --------->WRKY45                                                   <---------GLK1(2) <---------ARR11(3)    --------->WRKY12                                                 ----------->ARR10 <---------ATERF1(1)   --------->DOF5.7(2)                                      <---------ARR14(2)  --------->O2  <-------GAMYB                                             --------->GLK1(2)   --------->TGA1a     < <---------ANAC46                             <---------ZAT14        --------->ICU4   <---------TOE1(2) <---------MYB46(3)     ------>ZmHOX2a(2)     <---------ZAT18     --------->WRKY18(1)<---------LBD16< ------WOX13(1)        <---------At4g35610    --------->ZAT18   --------->LBD16 --------->ANAC46    - ----MYB46(3)        --------->ZAT14        <---------WOX13(1)<---------LBD16   <---------O2 ------>ZmHOX2a(1) ---YAB1             <---------ZAT14      --------->ATHB12 <---------GLK1(1)  <---------ALFIN1      -   ttgtcgttgacttgttgaatcagtgatctgtttctgtctaaaactgattgcacttgtctgaaattccggtcaagattctcccacatcgccggatcctctc  16741900                          --------->DEAR3(1)                   <-------MYC2                   <-------MYC3                   ------->MYC3                   ------->MYC2                  --------->TGA1a                  --------->bZIP60(2)                  --------->ANAC58             --------->DEAR3(1)                           --------->YAB1             --------->ANAC58                             --------->AHL20(2)             --------->ANAC46                             <---------AHL20(2)             --------->ANAC58                             <---------AHL20(1)            <---------LBD16------>NtERF2                  <--------ATHB1           <---------ATERF1(1)                            <---------ICU4           ------>ZmHOX2a(1)                             --------->ICU4          <---------ALFIN1--------->ANAC46               <---------YAB1        ------>NtERF2   ------>ZmHOX2a(1)       ------>ZmHOX2a(1)     ------>NtERF2--------->ANAC58          --------->ARR14(2) =================HOX2a_HOX2a               <---------ARR14(2)  <---------YAB1    <----------DOF2 =================HOX2a_HOX2a               <---------MYB52(1)  <---------AHL20(2)<---------DAG2 ---------ZAT14  ------>NtERF2    <---------ANAC58     --------->YAB1             ------------------- ---------ZAT2------>NtERF2--------->LBD16--------->DEAR3(1)--------->ICU4   <-----------GT1     ---- -------->ZAT14 <---------ALFIN1  <---------ANAC58    <---------YAB1       <-----------GT1*TSS------- -------->ZAT2--------->LBD16  <---------MYB52(1)   --------->YAB1       <------------------------ANAC81   cctgctctgcctcctccgccacgttcctccgccgtttcgtctcgccgttcctcttcataataatttttaattgtgtttttctctctttttgattttcgtc  16742000                              --------->ARR11(3)                              <---------ARR11(3)                              --------->ARR14(2)                       ----------->GT1                  <-----------TBP                <---------RVE1(1)                <---------CCA1(1)           --------->GLK1(2)         --------->GLK1(1)   --------->CCA1(1)                                                   <--- -->WRI1 <---------GLK1(1)   --------->RVE1(1)   --------->SPL7                                  <--- ------>DOF2   <---------ARR11(3)        ----------->ARR10<---------ANAC46             <---------WOX13(1) -->TOE2(3)    --------->ARR11(3) --------->At4g35610--------->DEAR3(1)         <---------ALFIN1 <---   aaagtcgagagaaatcagatatttatagtaaatatcttctgagtagaatcggacaccgaggcgagtaagttctgtttcatcaccacttgattaacaagag  16742100                                           --------->TGA1a                                           <---------TGA1a                                           <---------ANAC58                                           <---------ANAC58                 --------->ARR14(2)        =================================================bZIP_DOF                 <-----------ARR10      ------->MYC3                 <---------ARR11(1)     <-------MYC3                                      --------->ARR11(3)        <---------ANAC46                <-------MYC2                <---------ANAC46      <---------ARR11(1)        <---------ANAC55(2)             ------->MYC2 --------->At4g35610                  <---------ARR11(3)        <---------O2           ======================bZIP_DOF    <---------WOX13(1)      <---------CCA1(2)  ------->TEIL   ------->TEIL  ---------->DOF2       <---------At4g35610          --------->DAG2 <---------CCA1(2)         --------->GLK1(1)         <---------ZAT2<---------MYB46(3) <-------TEIL ------ANAC46    <---------ARR14(2)    --------->ANAC58        --------->ATHB12   <---------------AtSPL8 ------ANAC58   <---------CCA1(2)      --------->ANAC46   --------->ZAT14        ---------->DOF2    < ------ANAC58 --------->ANAC55(2)      --------->ANAC58   <---------ZAT14  <------ZmHOX2a(1) <-------   cgtgtatctcacgtagacgtatctatctgatatcaaagaacacgcgcgtgagtgaagctgtgaagtgattgggtagaggaataaaaagtacatatctttt  16742200                                                      <---------YAB1          <------------CBF                                                     <------------CBF        <---------AHL20(2)                                                   <---------YAB1           <---------YAB1                                                   --------------->AGL15   <-----------TBP                                                   <---------------AGL15 <---------RVE1(1)                                                  ------>ZmHOX2a(2)      <---------CCA1(1)                                                 <------ZmHOX2a(2)      <---------AHL20(1)                                                <---------ARR14(2)      --------->ARR11(3)                                                --------->ARR14(2)      --------->AHL20(1)        <---------ANAC58                        <---------ARR11(3)      <---------ARR11(3)        <---------ANAC46  <---------AHL20(2)    --------->ARR11(3)  ---------->DOF2             -----    <----------DOF2   <---------AHL20(2)        <-----------ARR10 >>>>>>>>>RAP2.2              ------    <---------DAG2    --------->AHL20(2)       <------ZmHOX2a(1)<---------ARR11(3)            -------  ------->TEIL    <---------YAB1           --------->CCA1(2)    --------->ARR11(3)   ----------->GT1 ---------ZAT18 <---------AHL20(2)       --------->CCA1(2)     --------->RVE1(1)    --------->DAG2 ---DOF2<---------ANAC58  --------->AHL20(2) <---------TOE2(3) --------->CCA1(1)   ---------->DOF2   tatgcacttttcttggatttatttttaattaaaccatggagagagataaggatcttattgtagaaatatctaaagatatttattgtaaagtgaatataaa  16742300                                                                ------>MYB83                                                                ------>MYB46(1)       <---------YAB1                                                              <---------MYB59        <---------TOE1(2)                                                          <------ZmHOX2a(1)       ------>ZmHOX2a(2)                                                          ===============================HOX2a_HOX2a                                                      --------->ZAT2            --------->ARR11(3)                                                      <---------ZAT2            <---------ARR11(3)                       --------->DAG2                ----------->RAV1(1)  --------->ANAC58                      --------->DAG2               --------->ZAT14     <---------ARR14(2)                 <----------ID1                <---------DEAR3(1)      --------->ARR14(2)       <----     <---------YAB1  ---------->DOF2--------->SPL7 <---------ZAT14    ===================HOX2a_HOX2a ------>GT1     ----------->GT1   <---------SPL7  --------->ALFIN1    ------>ZmHOX2a(1)       <------ --->DAG2 <---------AHL20(2)    <---------------AtSPL8<---------At4g35610 --------->ANAC58  <-------- --->DOF2 --------->AHL20(2)    <---------------AtSPL3--------->At4g35610 --------->ANAC46<---------AHL20(2)   gtaaaatatgaataaaatagggaaaaaggtatatggtgtacgacttgccacggtgcagcaggaaccaaattcctatacgcatgatctcatgtttaatgaa  16742400   <---------ZAT6                                           <----------DOF2         --------->GLK1(2) --------CBF            --------------->AGL15            --------->GLK1(2)         <---------GLK1(2) ---AHL20(2)           ----------------->AGL3     <---------ZAT6     --------->MYB46(3)    --------->ANAC46 -TOE2(3)         <---------ICU4      <---------ICU4    <---------GLK1(2)       >>>>>>>>>TBF1    <---   ttgtagtgtttcacatctaattagttccaagtttagataaacattacaaagagtgttagattctttagagaacaaacaagaagaagaatctctaagaaac  16742500  Previous    Next  AGI:  At2g40080.1    Description:  ELF4 (EARLY FLOWERING 4). similar to ELF4-L1 (ELF4-LIKE 1) [Arabidopsis thaliana] (TAIR:AT2G29950.1); similar to putative EARLY flowering 4 protein [Lycopersicon esculentum] (GB:AAW22881.1); contains InterPro domain Protein of unknown function DUF1313 (InterPro:IPR009741) Range:  from: 16741372    to: 16741990    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g40081.1    Description:  unknown protein Range:  from: 16742080    to: 16742193    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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