Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <----------DOF2                                            ------>MYB46(1)        --------->GLK1(2)                 <---------MYB46(2)        <-------TEIL                ----- ----->ANAC58                             <---------MYB111(2)      --------->CCA1(2)         -------- ----->ANAC58                            --------->ANAC46   ---------->DOF2              <-----------GT1 ->ARR14(2)                     --------->ATHB12    ----------->RAV1(1)        --------->At4g35610 --ARR14(2)<----------DOF2     <-------TEIL ------>MYB83  <------ZmHOX2a(2)    <---------At4g35610 --   agcaatagagactcttttgccctaaaacttcgattcattgctcaccaaactttacaacagatcaaagagatacactaacttagcttccaatttactccca  16738300      --------->YAB1      <---------ICU4                -------->HAHB4      --------->ATHB51              <---------ICU4      <--------HAHB4                --------->ATHB51      <--------ATHB1                <--------ATHB1      -------->HAHB4               <---------ATHB51     --------->AHL20(2)      ----------->GT1     <---------ATHB51       ----------->GT1     --------->ICU4        --------->DAG2                                                           <     <---------YAB1  <---------------AGL15                                                        ---   --------->YAB1   <---------ICU4 --------->AHL20(2)                                   --------->TOE1(3) ---->MYB52(1)   --------->YAB1    <---------AHL20(2)            <----------ID1         --------->TOE2(3) ->ANAC46--------->YAB1   ---------->DOF2   ------>ZmHOX2a(1)    ----------->GT1      --------->ANAC58 --------->GT1------>ZmHOX2a(1)--------->AHL20(2) --------->AHL20(2)                  --------->ANAC58   acggataataattatcctataatctttaaaaagttaaataattgtcctaaaatttaagaaccccaaaacgaaaaatcgaaactttcacaagcttaacttg  16738400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                           ---------->DOF2                                                         --              <---------HSFB2a(1)                             <---------AHL20(2)            ---------              --------->HSFC1(2)                             --------->AHL20(2)           <---------HSFB2a(2)              <---------HSFC1(2)           --------->DAG2    <---------AHL20(2)           --------->HSFB2a(2)              --------->HSFB2a(1)         --------->DAG2 <---------DAG2                <------------- ---------ALFIN1         <---------YAB1  ---------->DOF2 <----------DOF2           <----------DOF2 <- -------->RAV1(1)<-----------GT1 ----------->GT1---------->DOF2             --------->CCA1(2)    ----   caacacatttttcagaaatttcccattttgaaagttagtataaaaaaggggaaagttagcttttttaatagaaggaagacacgagctttcttctcaaaga  16738500      --------->ATHB51     --------->ICU4 -------->RAP2.6(2) -------->ANAC46           <---------ARR11(3) -------->DEAR3(1)  <---------At4g35610 ------>GAMYB <---------ARR14(2)                    ----------->GT1 ------->MYB46(3)   --------->ZAT2                ------->GAMYB ------->DEAR3(2)   --------->GLK1(1)          <---------DOF5.7(2)             --------->AHL20(2)---- ->DOF2       --------->MYB52(1)               --------->MYB52(1)      --------->At4g35610--------->MYB52(1) --AGL15     <------ZmHOX2a(1)               --------->DOF5.7(2)    --------->At4g35610 <---------MYB52(2) -----------AtMYB77 <---------ZAT2         <---------ZAT6          ------------------------>ANAC81 ----->ARR14(2)     --------->At4g35610--------->MYB46(3)        ---------->DOF2      ---------------   aaccgccattatcgaggaacggagctcaagaccctagcccaactacagttaacggagaaaaaaacccagaagcagaagaaataaaaaaaaactaacagag  16738600                  ==========================HOX2a_HOX2a                  <------ZmHOX2a(2)                 <---------ARR14(2)        --------->GLK1(2)                                                           <---------ZAT6       <---------GLK1(2)                                                            ----------->GT1       <---------ARR11(3)                                                           *TSS       --------->ARR11(3)                      ----------->GT1                    <---------ANAC46      <---------RVE1(1)               <---------ARR14(2)         --------->REM1(2)<---------ANAC58 ------>DOF2    --------->GLK1(1)    <------ZmHOX2a(1)    ---------->DOF2         <---------ANAC58 --------->ANAC81--------->ARR11(3)<---------TOE2(3)---------->DOF2     --------->ALFIN1          <--   aaagagagagattttgggagatcgagggagagagattgaggaattgggagagagaaaagagaaagtgtgaagacgagtggcattgagtgtaaatactgag  16738700                                                                                              -------                                                                                         ----------->HVH21                                                                                       --------->TGA1a                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)                                                                                       --------->O2--                                                                                       <---------ANAC58                                                                                       --------->bZIP60(1)                                                                                       <---------bZIP60(2)                                                                                       <---------ANAC58                                                                                       <---------TGA1a                                               ----------->GT1                         <---------ANAC46       ----------->GT1<---------DAG2   ----------->GT1                                 <---------bZIP60(1)      ------>ZmHOX2a(2)    --------->YAB1     --------->DAG2                        ----------->HVH21  <---------YAB1      <----------DOF2---------->DOF2   <---------AHL20(2)           ----------->TGA1 --------DOF2<------------CBF <---------ICU4 ---------->DOF2            ----------->GT1<---------O2--   ctttgtgatcggttaaattggaaactttttcataagttcaaaagaaaaaaagtttattttttgggtttgatgagaagaaaaattcagtgacgggacatga  16738800                                                                  --------->KAN4(2)                                                                 <---------ICU4                                                                 <---------KAN4(1)                                                                <---------YAB1                                                              --------->ATHB12                                                              <---------ICU4                                                              --------->YAB1                                                              <--------ATHB1              ------>MYB83                                   <---------YAB1              ------>MYB46(1)                                <---------ATHB12                      --            <---------MYB59                                  --------->ICU4                        <-            <---------MYB46(2)                       <---------ARR14(2)                            <-            <---------MYB111(1)                      --------->ARR14(2)                           ---           ----------------->AGL1                    <---------GLK1(2)                        <------ ---->HVH21--------->ANAC55(2)                      <------ZmHOX2a(1)                         <------ --------->RAV1(2)                                <---------TOE2(3)                           <------ ------->At4g35610     <---------YAB1  <---------ANAC46  <---------YAB1                    <---------AHL20(2)   catctggactggtacctaatgtgttatcaattgtttctatcgcttgaagcctaaggattctcaatgattattccgatgtttttttgtttgtattttaaga  16738900                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   --    <-----------HVH21                                                                              <- ------->AHL20(1)                    --------->ANAC58        <---------GLK1(2)               <-------GAMYB --------AHL20(1)                    --------->ANAC46       <--------ATHB1                  --------- --------AHL20(2)                    <XXXXXXXXXXXXXXXXXXXXMIR841B*                          <-------- ------>AHL20(2)                     --------->ANAC58       --------->YAB1                  --------- ---TOE2(3)                --------->ATHB12                <---------ATHB12               <---------MYB52(1) ---TOE1(3)               <---------ATHB12                 --------->ICU4               <---------ANAC55(2) ---YAB1                  --------->MYB46(3)  --------->ANAC46<---------YAB1    --------->YAB1   <---   ttatattgtcagagttttatattcttcaaccattgaaacacgacttactcgaaattgatcaatgattcttgagtttattgtattgtaatcacgtttgttg  16739000                                                        <---------TOE2(3)                                                       ---------->DOF2                                                     <---------YAB1                                                   --------->YAB1                                                   <---------AHL20(2)                    <---------AHL20(2)                                                   <--------HAHB4                        --------->AHL20(1)                                                   <---------ICU4                        --------->AHL20(2)                                                   --------->ATHB51                      <---------AHL20(1)     ---------->DOF2                               -------->ATHB1                    <---------AHL20(2) -------------->AGL15                              -------->HAHB4                    --------->AHL20(1) ---------------AGL15                             --------->ICU4                     --------->AHL20(2) --------------->AGL2                           <---------ICU4                       <---------AHL20(1) --------------->AGL3             <----------DOF2 <---------ATHB12                  --------->AHL20(2) ----------------AGL3          --------->ARR11(3) <---------ATHB51            ------>MYB83<---------AHL20(2) >MYB55(2)                     <---------ARR11(3) <---------YAB1              --------->MYB52(1) -MYB46(3)               ----------->GT1       <---------YAB1               <---------MYB46(2) >MYB52(2)              --------->ALFIN1       ------>ZmHOX2a(1)            <---------MYB59 --------GT1            <---------ZAT6       --------->YAB1     --------->ZAT6------>MYB46(1)   aaccatataaagaaatattgttcggagtggtaagacctttgtttgaatcctaattattaaagttgaacactatatagacctaactaataaatttatttca  16739100                                                            <------MYB46(1)                                                            ----------->GT1                                                            <------MYB83                                                            --------->ANAC55(2)                                                           --------->MYB46(2)                                                           --------->MYB59                                                       --------->ATHB12                            <-                                                      --------->ICU4                        ---------                                                    ------>MYB83                            <--------ATHB1                                                    <-----------------AG                   <---------ATHB12                                                    ------>MYB46(1)                        --------->ICU4                                                    ============================================MADS_MADS                                                   --------->MYB55(1)          <---------------AGL15                           <------MYB46(1)        <---------MYB46(2)          <-----------------AGL3                           <------MYB83           <---------MYB59             <-----------------AGL1                          --------->MYB59         <---------MYB111(1)         ----------------->AGL2                      --------->ATHB12          ------->TEIL<---------ANAC55(2)--------------->AGL15                      <---------ICU4         <---------ANAC55(2)              <-----------------AG <-                     --------->ICU4          --------->ANAC55(2)              <-----------------AGL2   attggaaattagttttttcatacattattaggtcttaatctgtcattaagtacctactgattaggtaacatactaaaatttctagttttggcaatgattt  16739200  Previous    Next  AGI:  At2g40070.1    Description:  similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G09000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41342.1) Range:  from: 16735272    to: 16738684    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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