Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <------------ATHB5                               -------->ATHB1                                       --------->ANAC55(2)                               --------->ATHB12                                     --------->ANAC46                               --------->YAB1                                       --------->ANAC58                               <---------ICU4                                       <---------ANAC55(2)                               <--------ATHB1                                     --------->YAB1-----                              --------->ICU4             <---------AHL20(2)      <---------ATHB12                              <---------ATHB51       <---------ANAC46          --------->WOX13(1)                              <---------ATHB12       <---------ZAT6      --------->ZAT14   --------->ANAC58                           ------------>ATHB5        ----------->GT1     --------->ZAT18   --------->ANAC46                <---------AHL20(2)         --------->AHL20(2)            <---------ZAT18   --------->ANAC58               --------->YAB1 <---------YAB1--------->ATHB12        <----------DOF2 --------->ANAC58   atgacttcaagactctatattaatcgtgctcaatgattgtgccaattcattagtagtgtataatttgagactttgtgaactcaatcacgaaacacacaaa  16733200                                                                 --------->SPL7                                                               <---------SPL7                                              ----------->GT1 --------->YAB1       <---------TOE2(3)            <---------TOE1(3)        --------------->AtSPL3                --       <---------TOE1(3)            <---------TOE2(3)        <<<<<<<<<ARR2 ------>MYB83         ----- ----->DOF2                  --------->AHL20(2)              <<<<<<<<<ARR1 ------>MYB46(1)      -----   aagaaaatgaaggtttattcaaaaaaaaaaaaaaaatgaaggtttgaaatggaaaatgaaacaatcgtaccaaaaccaaattgcaaaacgttttaaacaa  16733300                                                         <---------ALFIN1                                                         ----------->RAV1(1)                         <---------LBD16               --------->DEAR3(2)                         ------>ZmHOX2a(2)            --------->PCF2          --------->ANAC55(2)                         ------->TEIL                                 --          --------->ANAC58                           ------>MYB46(1)                               --          <---------ANAC55(2)                      <---------MYB59                                 <-          --------->ANAC58  <-------GAMYB          ------->GAMYB                                   --          --------->ANAC46 --------->LBD16       --------->MYB52(1)                     --------->CCA1(2) -------->DOF2          --------->ARR14(1)      --------->MYB52(1)                   <---------TOE2(3) ---->ANAC58          --------->YAB1           --------->MYB46(3)                    <---------YAB1-- ---->ANAC58         <---------ATHB12 ---------->DOF2------>MYB83              <---------YAB1      --   gaaaagaagaacacgtagtttcaatgatccggttgaattagaaagtagaacaaccgaacccacactaaattgcaaaacgttttgattaagataagaagaa  16733400                                        <---------MYB59                                        --------->TOE1(3)           --------->AHL20(2)           --------->TOE2(3)           <---------AHL20(2)      <------MYB46(1)                   <---------ICU4         --------->TOE2(3)         <------MYB83                     <---------YAB1 ------->ANAC58                  <--------P                         --------->ICU4 ------->ANAC55(2)             <---------MYB46(3)         --------->LBD16 <------------CBF --------ANAC55(2)          <---------ARR14(2)--------->YAB1 --------->ARR14(2)                  ---- ------->ANAC46             --------->ARR14(2)--------->TOE1(3)   --------->YAB1            --------- ------->ANAC58--------->YAB1 ------>ZmHOX2a(2)         <---------LBD16<---------YAB1       --------- ------->ANAC55(1)     --------->MYB52(1)     --------->TOE2(3)   <---------ICU4            ---------   cacgtatggaacattaattgtaatctaatggatcggttggaacctaaaccataactaaaccggaatactcatgatgaattggaagtatttgggctcgaaa  16733500                                                   <---------ICU4                        <-------TEIL                                                <---------AHL20(2)                      --------->CCA1(2)                                               --------->AHL20(2)                       --------->ARR14(1)                                               <---------AHL20(2)                      <---------ARR14(2)                                              <---------YAB1                           --------->ARR11(1)                                           <---------MYB52(1)                          --------->ARR14(2) ------>DOF2           --------->AHL20(2) <-------GAMYB                                <---------GLK1(2) >ANAC58              --------->YAB1<-----------ARR10                           <----------ID1  ----- >ANAC58        ----------->GT1     <---------ARR14(2)                        ---------->DOF2   <---- -->GT1 <---------TOE2(3)           --------->ARR14(2)        *TSS    <---------ZAT14----------->ARR10   aaagcccattaagaaaaatggaaataaaaatagtcacaaatctccgttattaatttttgccataagcttgagaacacttgaaaagacaagattcgcgagt  16733600                                                                                      ----------->RAV1(2)                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                             --------->YAB1                                 <---------HSFB2a(2)                      --------->MYB52(1)          <----------DOF2        --------->HSFB2a(2)                   --------->ANAC46         <---------DAG2   <---------ANAC46                             --------->ANAC58 ---->ARR11(3)            <---------ANAC58                             --------->ANAC58 -----ARR11(3)            <---------ANAC58     <----------DOF2   <-----------TGA1   <---------ANAC58   tcttcgttctgcctttttttttttttttgtgtgttcgagagatgtctgcctttgaagacgattccttcgtcatactcaacgatgatgcgtctgagtctgt  16733700                                                                                                 ----                                                                                                 <---                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                           <------NtERF2                                                 <---------ZAT18                           xxxxxxxxxx                                               --------->At4g35610                         --------->ATERF1(1)                          <---------GLK1(2)    <---------At4g35610                         --------->DEAR4(2)                   ------>NtERF2              ------>NtERF2                                --------->ORA47(2)                  --------->ANAC58            <---------DEAR3(2)                           --------->RAP2.3(1)                  --------->ANAC58     <----------DOF2                                    <---------ZAT18                  --------->bZIP60(1)--------->ZAT2 --------->ANAC58    <---------ETT(2) --------->DEAR3(1)                  --------->ANAC46   <---------At4g35610                --------->DEAR3(1)------>NtERF2                  <---------bZIP60(1)--------->At4g35610                <---------DEAR3(1)<---------ATERF1(1)                <-----------GT1      <---------ZAT2 --------->ANAC58  <-----------HVH21 --------->At4g35610            <----------DOF2   <----------DOF2<---------DEAR3(1)       --------->LBD16   <---------At4g35610     <-----------RAV1(2)<---------ATHB12     <---------RAP2.3(2)<------ZmHOX2a(1)       --------->ATERF1(1)   tccagtctcaggctcttttgacgccactgattctttctcagctttcgacggctcactccaagtcgaggactccgtcgacgatgtttttgcagcgccgtct  16733800                                        ------>ZmHOX2a(2)                                      --------->ARR14(2)                               <---------HSFB2a(1)                           <-----------HVH21                            <------NtERF2----------->HVH21               --------->DEAR3(1)                          --------->ATERF1(2)                            <---------ALFIN1                          <---------RAP2.6(2)                            --------->AtMYB61                         --------->RAP2.6(3)                            <---------MYB55(2)                        <---------ATERF1(1)                             --------->MYB46(3)         --------->ABI4(2)--------->ANAC58           --------->ANAC46   <---------ABI4(2)    <---------ZAT14    ----------->HVH21--------->MYB46(3)       <---------ANAC58 ----->At4g35610       ----------->TGA1<------ZmHOX2a(2)         <---------ANAC58 ------At4g35610      <-----------HVH21==============================HOX2a_HOX2a >RAP2.3(2)          ------->GAMYB<---------LBD16 ===================HOX2a_HOX2a             -------- >RAP2.3(3)       --------->MYB52(1)  <---------ARR14(2) <---------DEAR3(2) --------->DEAR3(1) >RRTF1(3)<---------ANAC58<---------bZIP60(1)     <------ZmHOX2a(2)    ------>NtERF2         <------- >DEAR3(1)<---------ANAC58--------->bZIP60(1)------->GAMYB    <---------CCA1(2)            <--------- -ANAC46 <---------MYB46(3)------>NtERF2=============================HOX2a_HOX2a <------NtERF2 xxxxxxxxxxx>smallRNA(fl3)--------->ANAC58--------->MYB52(1)  ------>ZmHOX2a(1)<---------DEAR3(1)   tctgactacggtgcttactccaacggtgacggcatcttcggatccaacggggatcacgacggtcctatcttgccaccaccgtcggagatggaatcagatg  16733900                                                          <---------DAG2                                                          <----------DOF2                                      ---------->DOF2    <---------ANAC58                                ------>ZmHOX2a(2)        <---------ANAC46                               <------ZmHOX2a(2)         <---------ANAC58  --------->GLK1(1)           <---------AGP1          ---------->ID1  <---------GLK1(1)           --------->ARR11(3)    <-----------RAV1(1) <---------ARR14(2)           <---------ARR11(3)  <----------DOF2 --------->ARR14(2)           --------->AGP1     ==================================HOX2a_HOX2a ->At4g35610                  --------->ARR14(2) ------>ZmHOX2a(2)          --------->LBD16--------->DAG2 --At4g35610                ----------->ARR10  <---------ARR11(3)           ------>ZmHOX2a(1)  ------ --RAV1(2)              ----------->GT1        --------->ARR11(3) <-----------GT1         ---------->DOF2   agggatttgctcttagagaatggagaaggttagatctactcaaagttttgatctttgttgctttttgtttacttcttcctgaagaaaatcgataaagtgg  16734000                         --------->GLK1(2)                     --------->YAB1                                                          >>>>>>>>                  <----------DOF2                                                     <---------STY1(2)             --------->GLK1(2)                                                     <---------MYB52(1)             <---------ARR14(2)                        <-----------GT1         <---------At4g35610 ----->GT1  <---------GLK1(2)                     <---------YAB1         <---------TOE2(3) <---------ZAT6   ataaatttagttgagaatctctttgataatctgagaatttcaattttgaattttgattcacaatttttgtgaattgaagttatctgctagttagtgtcca  16734100  Previous    Next  AGI:  At2g40060.1    Description:  protein binding / protein transporter/ structural molecule. similar to protein binding / protein transporter/ structural molecule [Arabidopsis thaliana] (TAIR:AT3G51890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69697.1); contains InterPro domain Clathrin light chain; (InterPro:IPR000996) Range:  from: 16733562    to: 16735263    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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