Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ATERF1(1)        <---------ARR14(2)      --------->LBD16   --------->MYB52(1)  ------>NtERF2  --------->ORA47(1)  <---------SPL7 --------->MYB46(3) --------->DEAR4(1) --------->DEAR3(1) --------->DREB2C(2) --------->WRKY12 ----------->HVH21 -------->ORA47(2) -------->ATERF1(1) -------->RAP2.3(1) ------->ABI4(1) ---->NtERF2 --------ATERF1(1) ------>DEAR3(1) ------>DREB2C(2)                                                   ------>ZmHOX2a(2) ---->GAMYB                                                        <---------At4g35610 ----->DEAR3(2)                                                   <---------AGP1                   -- ----->MYB46(3)                                              --------->ZAT2           <---------ARR14(2) -----ATERF1(1)<---------At4g35610                           <---------ZAT2    <---------YAB1      <- ----ALFIN1    --------->At4g35610                    --------->At4g35610 <---------ANAC46       ---- -->ETT(2) --------->DEAR3(1)                      <---------At4g35610--------->At4g35610      <----- ---ETT(2)--------->ATERF1(1)                     ------>ZmHOX2a(2)<---------GLK1(1)  <-----------ARR10 -->SPL7--------->ARR14(2)       <<<<<<<<<TBF1   <------ZmHOX2a(2)<---------ARR14(2)  --------->ARR14(2) -->MYB46(3)   --------->LBD16<<<<<<<<<TBF1     <---------ARR14(2)--------->ARR14(2)  --------->GLK1(2) ---HVH21------>NtERF2<-----------GT1           --------->ARR14(2)<---------ARR11(3) <---------GLK1(2)   ccgccgaccggagcctccgctgatataccttcttcttcttcatcttcgcagatcgctgctacaagctggatctgcttcgtgatgagagaatctagcctcc  16708700                     ------->TEIL                   <---------SPL7                  <---------REM1(1)              <--------P              <---------WOX13(1)             <-------GAMYB            --------->MYB55(2)           --------->ALFIN1       <---------At5g28300                                                        --------->ARR11(3)       <---------LBD16                --------->MYB46(3)           ------>ZmHOX2a(2) ------->ARR14(2)<---------------AtSPL3                           --------->GLK1(1) --------ARR14(2)<---------------AtSPL8 --------->MYB52(1)       --------->ARR11(3)            <----- ----->LBD16<---------MYB46(3)        <---------MYB52(2)         <---------ARR11(3)            ------ ----LBD16 <---------AtMYB61     --------->YAB1       --------->GLK1(2)---------->DOF2         ------   ggttccattcacggtggttgatgtacggtctagtatcagaacaaacggcgaaaactaatctgaaactgatctccaaagcttgaagagctggtttgagaat  16708800                                                                                              -------                                                                                             --------                                                                                            <-------PIF5                                                                                            ------->PIF5                                                                                           --------->At4g35610                              ----------->HVH21   <-----------RAV1(2)       --------->At4g35610                         --------->ANAC55(2)      <---------LBD16---------->DOF2           <---------At4g35610 ----ARR14(2)            <---------ANAC55(2)   --------->At4g35610          <---------At4g35610 --->GLK1(2)     <------ZmHOX2a(1)             <---------At4g35610--------->DAG2         <-----------RAV1(2) --->ARR14(2)  <---------TOE2(3)        <----------DOF2      <---------TOE2(3)     ---------->DOF2   cggctctgatgtccattgaggaaaatcacgagatgaccagagctttcttagctcagggagacgaaggtaaagctcgtaagcagagcaaagagcaggtgct  16708900                                                            <----------DOF2                                                    <---------ANAC58                                                    <---------O2   ---------->DOF2             <-----                                                    <---------ANAC58                     <---------ARR14(2)        ------>ZmHOX2a(2)                           <---------ANAC55(1)             <------MYB83       <------ZmHOX2a(2)                            <---------ANAC55(2)             ----------->GT1 --------->TOE1(2)                                  --------->ANAC55(2)             <------MYB46(1) -->At4g35610                                       <---------ANAC46               --------->MYB46(2) ->ALFIN1   --------->At4g35610       --------->ALFIN1----------->HVH21            --------->MYB59<--   gaacatgagatcggagatgaaacagggacgattttgaacggtgatggaatagttacgtgaagctttgaagaaagcttaggtgagtttggtaaatctgatg  16709000                                      <---------AHL20(2)                                  <---------AHL20(2)             <---------ANAC58                                --------->AHL20(2)               <---------ANAC46                           <---------ATHB12   --------->ARR11(3) --------->ALFIN1      <---------AHL20(2)                         <-----------GT1    <---------TOE2(3)    <---------ANAC58   ----------->GT1                         --------->WOX13(1) <---------TOE1(3)  <---------ANAC58  <---------ANAC58 ----YAB1------>ZmHOX2a(1)-------->P  --------->AHL20(2)       <---------ANAC46  <---------ANAC58 ---------GT1    <---------ATHB12<---------YAB1                <---------ANAC58  <---------ANAC46   ataccatcttcctcttccaatccatatcaaccatttttatttttttaaggtctgtgttttttttggtgtgtgtgtttgtgtttgtgtgttaaattttgaa  16709100                                                                                             ------>NtERF2                                                                                            ---------                                                                                            <--------                                                                                            <--------                         ----------->GT1                                                    ---------                  <---------TOE2(1)                                                         ---------                --------->CCA1(2)                                           --------->ALFIN1---------               <---------ARR14(2)                                         <---------ANAC46  =========               --------->ARR14(2)                                    ---------->DOF2--------->YAB1 --              <------ZmHOX2a(1)                                      ================================            <---------TOE2(3)                                   ----------->GT1----------->GT1-------      *TSS  <---------TOE1(3)<-----------TBP               <----------ID1 <---------ANAC58  ---------   <------ZmHOX2a(1)  <------ZmHOX2a(1)                 --------->ALFIN1  <---------ANAC58  ========= <---------TOE2(3)<---------TOE1(1)                   <------ZmHOX2a(1)--------->DAG2   --------->DEAR3(2)   tttgaggatgagtttaggatacgaggagagtatatatagagagaaatgtggatagaggatggggacgagaaaaaaggcgtgtggaataataccgacgcga  16709200 >TGA1a -TGA1a           <---------ARR14(2) -O2              --------->ARR14(2) >O2 ---------->DOF2 >ANAC46     <---------ANAC46 >ANAC58    <---------At4g35610 ===============bZIP_DOF                                                                 <---------MYB52(1) ------->ATHB12 ----------->ARR10                                               <----------DOF2   <-- =bZIP_DOF  <------NtERF2                                       --------->AHL20(2)    ---------->ID1 ---->HVH21 --------->At4g35610                          <---------ANAC46    --------->GLK1(2)  ----- >ANAC58  <---------WRKY12     <----------DOF2         --------->ZAT14   <------ZmHOX2a(1)<----------DOF2 ===============bZIP_DOF <---------ATERF1(1)           <---------ZAT14<---------LBD16<-----------GT1   ctgatttgaaagtcagcgtagaaacgcggtctcctttttaaaaaaaaaaaaaaccagtactgtggattaatttcaggataatctttttttcgttttttgg  16709300                                                                                                 <---                                                                                           --------->ARR11(3)                                                        --------->KAN4(1)      <------ZmHOX2a(1) ----                                                       <---------KAN4(2)     <---------TOE2(3)   <---        <----------DOF2        ----------->GT1         <---------TOE1(2)     <---------TOE1(3)<------        <---------DAG2      ---------->DOF2 <---------YAB1                 --------------------->WRI1       <---------ANAC58   <---------YAB1    --------->ICU4             --------->GLK1(1)   <---------ARR11(3)       <---------ANAC58 --------------->AGL15--------->ATHB12     <---------At4g35610      --------->AHL20(1) --------DOF2           <---------------AGL15<---------ICU4  --------->ANAC55(2)           <---------AHL20(1) ----->ID1              =============================================================================   ctttatattgctttttgaactgttttctatgaaaggtaaatgcctgatgattagtcgaatgttcagtaatctgatttctaaggaaatatcgaatattttc  16709400                       --------->YAB1                --------->ARR11(3)                <---------ARR11(3)            <---------CCA1(1)            <---------RVE1(1)           <---------ARR11(3)           --------->ARR11(3)      ----------->GT1           <---------AHL20(1)     <---------TOE2(3) --------------AG    --------->AHL20(2)                  --------->YAB1 ------>ID1--------->AHL20(1)    <---------DOF5.7(2)    <-------TEIL --------------AGL1<----------DOF2<---------TOE1(3)  --------->ICU4 -----GT1----------->ARR10       ---------->DOF2   --------->YAB1                               <---- ==============MADS_MADS   ---------->DOF2   --------->ANAC46   ----------->GT1         <---------AHL20(2)   tcgtttttggtaagatattatcttttaataaaagttaaagttaaaacacacagtcatgttcataacatgttaatacatatatagaaatgttttatttgat  16709500                                              <---------AHL20(2)                                     --------->YAB1                                        <---------ANAC58        <---------REM1(1)        ------>ZmHOX2a(2)                            --------->WRKY18(1) --------->CCA1(2)              <---------WOX13(1)           <-------TEIL   --------->WOX13(1)<------ -----YAB1 ----------->GT1  <--------P       --------->AHL20(2)       ---------->DOF2      <---------ANAC58   gatatatgcgatgtagtataacatttaggggttgatcgataagaatataaaattttctgcaaatacatttttgaaagtcagtcatgcgttatgggttgtc  16709600  Previous    Next  AGI:  At2g40000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41329.1); contains InterPro domain Hs1pro-1, C-terminal (InterPro:IPR009743); contains InterPro domain Hs1pro-1, N-terminal (InterPro:IPR009869) Range:  from: 16707588    to: 16709106    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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