Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ZAT14                                                                      --------->ANAC58                                                                   ----------->HVH21                                                                   ----------->TGA1                                                                 --------->At4g35610                                                                 <------MYB46(1)  --------->ZAT14                                                                 <---------ANAC55(2) ->MYB46(1)                                                      --------->ANAC55(2)<---------ZAT14 ->MYB83                                                        --------->MYB59<---------ANAC46 -->TOE2(3)                                                     --------->MYB46(2)--------->REM1(2) ---MYB46(2)                                           --------->LBD16--------->ANAC58 ---MYB59                 <---------ANAC46            <---------HSFB2a(2)     <---------------------- ->ANAC55(2)--------->MYB52(1)    --------->ANAC46    --------->HSFB2a(2)   <---------GLK1(2)    ==== --GT1    --------->MYB46(3)    <-----------GT1 <---------GLK1(2)<------MYB83--------->GLK1(2)   <---   attcaacgattaacaaacagacacaatcgcgtttaaacgagacgattgaagattatccagaagaattaggtgacgaaagaatcgtgtacagtttgaagag  16693400                                <---------At4g35610                                --------->ZAT2                                --------->At4g35610                           <---------ALFIN1                           --------->AtMYB61                          --------->MYB46(3)                       --------->ATHB12                      ------>ZmHOX2a(2)                           --------->ICU4                      XXXXXXXXXXXXXXXXXXXXX>MIR856                <---------YAB1                   --------->YAB1                            <---------ETT(1)                    <---         --------->ZAT2 --------->ANAC46                  <---------SPL7                       ------         <---------At4g35610  <---------ALFIN1            <-----------HVH21                    <-----         --------->At4g35610  --------->MYB46(3)         <---------ANAC58                     -------        --------->GLK1(2) <---------MYB55(2)             <---------ANAC58               ------>MYB46(1) -TaNAC69(2)      --------->ICU4<---------ZAT2       ---------->DOF2                    ------>MYB83 ============================HOX2a_HOX2a  <---------ARR14(2) ----------->HVH21         ----------->RAV1(1) ---ZmHOX2a(1)    <---------ATHB12       --------->WOX13(1) --------->SPL7            --------->AtMYB61   gataagtgagaagctgagcaatgatcccaccaccagctccagccaatccattgatcaaagcgtccgacatgatttctatattccaacaccaacaaaatta  16693500                                                             <-----------GT1                                                          <---------ICU4                                                        --------->LBD16                                                       --------->HSFB2a(2)                                                       <---------HSFB2a(2)                                                     <------ZmHOX2a(2)                                                     ==================================HOX2a_HOX2a                                                     --------->CCA1(2)                                                    <---------ARR11(3)                                                    <---------ARR14(2)                                                    --------->ARR11(3)                                                    --------->ARR14(2)          <------ZmHOX2a(1)                                                    --------->AGP1            <---------TOE2(3)     < ------YAB1                                        --------->GLK1(1)  <---------ARR14(2)            - --->YAB1                                          <---------GLK1(1)  --------->ARR14(2)      <------ ----ICU4        ----------->GT1              ==============HOX2a_HOX2a       <---------TOE1(3)    -- -->ICU4      --------->GLK1(1)               <------ZmHOX2a(1)   <---------LBD16        --------->GLK1(2)   tgagcaaaaacaagagaaatcgaaaatcgctgattctaatgccaaggaggaagagatccagaattacctccggttcggataaggattgaagaatcgtcgt  16693600                                                        <---------RAP2.6(2)                                                        <---------ANAC58                                                        <---------ANAC58                                                   -------->HAHB4         --------->MYB46(3)                        --------->YAB1         <---------MYB52(2)                        <---------ICU4                                  <-      <---------ETT(1)                             --------->ATHB12                             <---- <---------HSFB2a(1)                              <---------ATHB12      --------->HSFC1(2)    <------ --------->HSFB2a(1)                              --------->ICU4        <---------HSFB2a(1)   ------- ---------ARR11(3)                                <---------YAB1 <------ZmHOX2a(1)           -------- -------->ARR11(3)   --------->GLK1(2)           <---------TOE2(3)---------->DOF2       --------->LBD16 ---ANAC46 --------->MYB52(1)           --------->ARR11(3)<------NtERF2 <---------HSFC1(2)   <------- ------->GLK1(1)    <---------GLK1(2)  <------ZmHOX2a(1)<---------ANAC46--------->HSFB2a(1)  <-------   gaaatcttccgacaaacggagagaatcgcagaagcttaagaggatgttgttaatgatggcgtctgtaggaaaggagcttcttctccattccccaaataat  16693700                                                                       <---------TOE2(3)                                                                  <---------ANAC46                                                                 <---------TOE2(3)                                                                 <---------TOE1(3)    <----------DOF2                                     --------->ANAC55(2)             <------ZmHOX2a(1) --------WOX13(1)                                       --------->ANAC55(1)            *TSS     <---- -----YAB1                                              <---------ANAC55(2)         <---------ZAT14 ---ICU4                                                --------->ANAC58         <---------ANAC46 -->YAB1                                                --------->ANAC46    --------->ICU4    <------ ->ICU4               ---------->ID1                    --------->ANAC58 <------ZmHOX2a(1)    ------- --ATHB51            <-----------GT1         ---------->DOF2   --------->WRKY12 <------ZmHOX2a(1) <-- --ATHB12       <----------DOF2    <-------TEIL  ---------->DOF2<---------DOF5.7(2)--------->ALFIN1<-   gaatgactttaattctctctttttttcgcttcagaagttcattcgaagaaagaaagacacgcaagttgacgttgaggaatgaggagtgtaggaggtatgt  16693800                                 <---------ANAC55(2)                                 --------->ANAC55(2)                                 --------->ANAC46                                 --------->ANAC58       <----------TaMYB80        --------->ANAC58   <---------WOX13(1)   <---------WOX13(1) -----AHL20(2)         <---------ANAC58                                --------->At4g35610 ---ANAC55(2)          <---------ANAC58        ------>MYB46(1)         <---------At4g35610         <- -->ANAC55(2)      <------------CBF         --------->HSFB2a(1)  <------MYB46(1)                   <- ----------CBF    --------->ATHB51      <---------MYB59          <------MYB83                      <- --------WOX13(1)<---------YAB1 <---------LBD16------>MYB83     --------->MYB59      <----------DOF2   aattgactgatatgcccttataattgagtgatattacggaagcctaaccttccatgtactactagtttggtttagctggataagactctttttcttgaac  16693900                                                     --------->ATHB51                                                     <---------ICU4                                                     <--------HAHB4                                                    --------->ICU4    <---------MYB46(3)                                                  <---------------AGL15                                                  --------------->AGL15                                                  --------->TOE2(3) --------->LBD16                                                 ----------------->AGL3                                                 ====================================================                                                 <-----------------AGL2      <------MYB46(1)                            ----------------->AGL2                          <---      <------MYB83    --------->At4g35610   <---------YAB1         <---------ANAC46        <---------MYB52(1)     --------->MYB59  --------->ZAT2       <---------ARR11(3)    ------>NtERF2        <-----------GT1 --------ANAC58       <---------ZAT2      --------->GLK1(1)    <---------ANAC58   <----------DOF2---- --------ANAC46       <---------At4g35610 <---------GLK1(1)    <---------ANAC58<-----------GT1  <---- --------ANAC58<---------AHL20(2)---------->DOF2 <-----------------AGL3 <---------ANAC46<---------TOE2(3)   tgcgtgttcggtcttatttgattcagcttagcatataaagatggatatcattccataattagtttgcctccgtggtttgtttaacttttaaacgtttggc  16694000                                                       --------->ICU4                                                     --------->YAB1        ----------->HVH21    <---------DAG2          <---------ICU4 ============MADS_MADS       <----------DOF2        <---------ATHB12 ------------AGL15     --------->ARR14(2)      >>>>>>>>>GATA-1     <-----------GT1 ----------->AGL15     <---------ARR14(2) --------->YAB1--------->ATHB12 -------------AGL2  --------->ANAC55(2)  <---------YAB1<---------YAB1        <---------YAB1   tgaatatggtatgactcggtttacatatttgctttatactagtatcatagataaatcatgatttagttttatctacattatgcatattgttagacaaact  16694100                                  --------->TOE2(3)                           ------>ZmHOX2a(1)                                               <---------                          --------->TOE2(3)                                          <-----------GT1                       <-----------GT1                                      <---------ANAC58      <--                    <---------ARR11(3)                                      <---------ANAC58     ----                    --------->ARR11(3)                                --------->ATHB12     ----------                    <---------AHL20(1)            ----------->GT1<---------YAB1      --------->ARR11(3)                    --------->AHL20(1)   <-----------GT1       <-----------GT1       <---------ARR11(3)   aaaatatgttttaagactgaaatattttcctcattttcttaaataactcgttttgtaaaactaaattacaattcatttgcttcgaattatcttctttgat  16694200              <---------LBD16                                                           <---------TOE2(3)            <---------MYB52(1)                                                          <---------TOE1(3)           <-------GAMYB--------->ANAC58                                               <-----------RAV1(2)  --------->YAB1        --------->ANAC58                                        <-----------GT1 -DOF2    <-----------RAV1(1)                                              <----------DOF2   -------- -------AHL20(2)      ---------->DOF2                                 <---------At4g35610  <--------P ----->AHL20(2)     ------>ZmHOX2a(2)        <---------SPL7    <---------AHL20(2)  <----------DOF2 ----------->WRI1 <---------ARR14(2)    --------->MYB46(3)   <----------DOF2   <-----------GT1     --   tttatagtaagactgttggggatcgaaagctatctatctctcaccatcgtatgggcttactagctttaattgagcttcttttaaacttttcaggttaggc  16694300  Previous    Next  AGI:  At2g39970.1    Description:  peroxisomal membrane protein (PMP36). similar to ATFOLT1 (ARABIDOPSIS THALIANA FOLATE TRANSPORTER 1), binding / folic acid transporter [Arabidopsis thaliana] (TAIR:AT5G66380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69026.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993) Range:  from: 16690910    to: 16693787    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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