Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->AtLEC2                      <------NtERF2                      --------->TGA2(2)                      --------->ATERF1(1)                     <-----------TGA1                     ------>NtERF2                     <---------ATERF1(1)                     <-----------HVH21                                 <---------AHL20(1)                    --------->bZIP60(2)                                --------->AHL20(1)                    --------->O2                                      <---------AHL20(2)                    <---------bZIP60(1)                               --------->YAB1                    --------->bZIP60(1)                               --------->AHL20(2)                <---------LBD16                                      <---------YAB1                --------->ATERF1(1)                                <---------ICU4             <-----------HVH21                                     --------->YAB1           --------->HSFC1(2)                                     --------->AHL20(2)           --------->HSFB2a(1)                              ----------->GT1 <---------ARR14(2)<------NtERF2                           <-------TEIL<---------AHL20(2) --------->ARR14(2)--------->RAP2.3(1)                    --------->GLK1(2) --------->GLK1(2)------>NtERF2                 ---------->DOF2   <---------ATHB51 ---------GLK1(2) --------->LBD16     <-----------HVH21  <---------GLK1(2)                          - --DOF2    <---------HSFB2a(1) ------->TEIL  --------->TOE2(3)    --------->ICU4         <---------YAB1 >AtSPL8   <---------HSFC1(2) <---------AtLEC2------>ZmHOX2a(1)   <---------AHL20(2) ----------------   aagaatctgaagaagggtcccggcgtcaccatgcatgtatggtcactccttaaaccagagattcgtaaataattatattgtagtttccattgttattgtc  16672700                                                                             --------->ALFIN1                                                                            --------->TOE1(2)                                                                           <---------ANAC58                                                                           <---------TGA1a                                                                           --------->O2                                                                           <---------ANAC46                                                                           <---------ANAC55(1)                                                                           <---------ANAC58                                                                           --------->TGA1a                                                                       <------ZmHOX2a(1)                                                                     --------->MYB59                                                                <---------YAB1          --------->PCF5                                       <---------TOE1(2)      --------->YAB1 <---------AHL20(2)                                          --------->TOE1(2) ----------->HVH21 --------->AHL20(2)                                       --------->GLK1(2)<---------O2 -------->AHL20(2)                                        <---------ARR11(3)------->MYC3 ----->WRI1                         <---------PCF5        --------->ARR11(3)<-------MYC3           <-   gatttatttatggtccccaatgttctcttggagtcgagggaccatacatttagcttcaaaaatcttacgattaggaaacgtgtgacaataacatttgttt  16672800                                    <---------AHL20(2)                                    --------->ATHB51                                    --------->AHL20(2)                                    <--------ATHB1                                    <---------ICU4                                   <---------ATHB12                           <---------------AtSPL8              <---------ICU4       <---------ATHB51             ------>ZmHOX2a(1)     --------->ICU4            <---------MYB59--------------->AtSPL8     <---------ZAT2      --------->REM1(1) --------->ATHB12   --------->ICU4            ------->MYC2  --------->At4g35610  <---------ATHB12  ---------->DOF2             <-------MYC2  <---------At4g35610  <---------YAB1   --------->AHL20(2)           ------->MYC3 --------->MYB52(2)   <---------TOE1(2) <---------AHL20(2)           <-------MYC3 --------MYB52(1)    ------>ZmHOX2a(1) <---------AHL20(2)          ------->TEIL                     -   tgttagctacaattcctaatttcctatgatttgtacaataatttaaagattaacacagcttgtgggatgcacatggaatttgtctaatagaatttagttc  16672900                                          <--------HAHB4                                          <---------ICU4                                  ------>NtERF2                                          --------->ATHB51                   --------->AHL20(2)                                         <---------YAB1                     --------->AHL20(2) ------                                    <----------DOF2                         <---------AHL20(2) ======                         <---------ANAC55(2)                          <---------ANAC58   <---------ATERF1(1)   --------->ARR14(2)    --------->ANAC55(2)<---------YAB1            <---------ANAC46  --------->ATERF1(1)   <---------ICU4      <-----------GT1   --------->ICU4               <---------ANAC58  <------NtERF2   <---------ARR14(2)<-----------HVH21 --------->YAB1                 ----------->GT1  <---------LBD16  <---------YAB1    --------->YAB1<---------ICU4<----------DOF2  --------->ATHB12 ---------->DOF2 -------->YAB1--------->ANAC46 --------->YAB1<-----------GT1    <---------YAB1    ===================   catcatatttgcatacaaacaattgtcacctattaatactttcattattactttcgatgaaacattgttattgggtatataaattaaggcccggccctaa  16673000                    --------->At5g28300                   ----------->GT1                 --------->ZAT18                 <-------TEIL                 --------->ZAT14                 <---------ZAT14               <-------MYC4               ------->MYC4               ------->PIF4               <-------MYC3               <-------PIF4               <-------MYC2               ------->PIF5               ------->MYC3               ------->MYC2               <-------PIF5              --------->O2              <---------O2                                                                   <-------              <---------TGA1a                                                                --------              --------->TGA1a  <---------YAB1                          <---------ICU4        --------              <---------ANAC46<---------AHL20(1) ----------->GT1       --------->YAB1        <-------     <---------AHL20(2)       <---------AHL20(2) --------->YAB1       --------->ICU4  <---------ZAT6    --------->AHL20(2)      <---------YAB1  ------------>CBF    <------ZmHOX2a(2)   <---------ANAC46 ---->DOF2  <------------OsbHLH66           <---------YAB1     <---------ARR11(3)   <---------ANAC58 =======================bZIP_DOF      <-----------GT1          --------->ARR11(3)   <---------ANAC58 =======================bZIP_DOF <---------AHL20(2)        ---------->DOF2     <----------DOF2   agcccatttattagccacgtgcagtaacttattatttttttcacttatcaatagtaaaaaaaaaagatcaaaatgatcactcttttgagtgtgagtgaac  16673100                                                                                               ------                                                                                        <---------ALFIN1 *TSS---------->ID1                           <---------At4g35610       --------->ARR14(2)     ------ --ZAT14               <----------DOF2        --------->ZAT2   --------->YAB1         <-----------HVH21 ->ZAT14         --------->ZAT6  --------->ARR11(3)           <---------ATHB12     ------>ZmHOX2a(1) ->ZAT18      <----------DOF2    <---------ARR11(3)         --------->WOX13(1) --------->ARR14(2) --ZAT18<---------CCA1(2)       --------->At4g35610<---------AtLEC2     <---------ARR14(2)--------->ANAC46   acacttcgtcgtctctctttcactacttttgagaagctctcttcttcgagcttccatggatgcaatcaaatgcagttccagtttcctccatcacaccaag  16673200                                 <---------ARR11(3)               --------->SPL7                             ------>ZmHOX2a(1)                  <---------SPL7         <------ZmHOX2a(1)                            --------->TOE2(3)            <---------ALFIN1          ---------->DOF2                        <----------DOF2             --------->ANAC58             --------->LBD16  <---------ALFIN1     <---------DAG2  <---------At4g35610     <---------ANAC58 --------->ANAC46   -- --------->ZAT14    <---------ALFIN1   --------->At4g35610     <---------ANAC58<---------LBD16  ----- >MYB46(1)        <-----------GT1--------->ARR11(3) --------->ANAC46         --------->ARR14(2) ----- >MYB83          <---------ATHB12<-----------ARR10  --------->ANAC58        <---------GLK1(1)   -----   ctcaacactctcttctctaatcacacctttcctaaaatctccgctcccaatttcaagcccctcttccgtccgatttcgatttccgcaaaggacagaagaa  16673300                                                                                            <--------                                                                                            <--------                                                                                           --------->DREB2C(2)                                                                                           --------->DEAR3(1)                                                                                         ------>MYB46(1)                                                                                         ------>MYB83       ----------->GT1                                                                  <---------ALFIN1     --------->ZAT2                                                                    <---------ABI4(2)     --------->At4g35610                                                               --------->MYB46(3)     <---------ZAT2                                                                    <---------MYB55(2)     <---------At4g35610                                                              --------->DEAR3(2)    ------->TEIL                                                                     <---------TCP15(1) <---------MYB52(2)                                                                  <---------TCP20 ------->MYB52(1)   --------->LBD16               <---------RVE1(1)                  --------->PCF2 ---->ANAC46       --------->DEAR3(1)            --------->ARR11(3)                  <---------ARR14(2) ---->ANAC58 --------->RVE1(1)--------->ARR14(2) <---------ARR11(3)        <-----------------AGL1   - ---->ANAC58 --------->CCA1(1)<---------ARR14(2) <---------GLK1(2) ------->TEIL      --------->ARR14(2)   gcaacgaagctgaaaatatcgccgtagtagagaaacctcttaaatcagatagattttttatctccgatggacttccttctccattcggacccaccgtcag  16673400       ------>NtERF2      <---------ANAC46                                                              <-------TEIL     --------->RAP2.3(1)                                                       <-----------RAV1(2)     <------NtERF2                                                            <---------MYB52(1)    <---------ATERF1(1)                                                 --------->GLK1(1)    <---------RAP2.3(1)                                <----------DOF2  <---------GLK1(1)    ------>NtERF2                                      <---------WOX13(1)    <-----------TGA1   <---------DEAR3(1)                      --------->At4g35610          <------ZmHOX2a(2)           <  --------->ATERF1(1)                      <---------At4g35610         --------->ARR14(2)      ------ <---------ATERF1(1)                      --------->ANAC46             <---------ARR14(2)--------->YAB1 ---HVH21               --------->ZAT6 <---------ARR14(2)     <-----------GT1<-----------HVH21 ------ ---TGA1<------NtERF2 <-----------GT1  --------->ARR14(2)  <---------GLK1(1)--------->ANAC46   ------ ---------->HVH21    --------->ZAT14  <---------MYB52(1) --------->ATHB12------>ZmHOX2a(2)   --------   agacgacggcgtcaatttctctgtttactctacaaactccgtttccgctaccatctgcttgatttctctctccgatctccgtcaggttcaatcttcaaag  16673500                                                                                              <------                                                                                      <------ZmHOX2a(1)                                                                                      ===============                                                                    --------->HSFB2a(2)    <-------TEIL                                                                    <---------HSFB2a(2)   --------->GLK1(2) -----------------AGL3                                         <---------O2      <---------ANAC46 --->ANAC58                                                    --------->ANAC46--------->MYB52(1) --->ANAC58                          <----------DOF2           --------->O2   ----------->TGA1------- --->ANAC46               <---------AtLEC2                   <-----------GT1  ----------->HVH21 -->DOF2         ----------->HVH21   <---------DAG2   --------->AHL20(2)  ---------->DOF2<---------ARR14(2)   caactgtttttgggtttcactgacattttcatgaaacccctttttcaaatttgggtttaaatttcacgttgcagaacaaagtgacggaggagattcagct  16673600  Previous    Next  AGI:  At2g39930.1    Description:  ATISA1/ISA1 (ISOAMYLASE 1); alpha-amylase/ isoamylase. similar to ATISA3/ISA3 (ISOAMYLASE 3), alpha-amylase [Arabidopsis thaliana] (TAIR:AT4G09020.1); similar to isoamylase isoform 1 [Pisum sativum] (GB:AAZ81835.1); similar to isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris] (GB:BAF52941.1); similar to isoamylase isoform 1 [Solanum tuberosum] (GB:AAN15317.1); contains InterPro domain Glycoside hydrolase, family 13, N-terminal; (InterPro:IPR004193); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756); contains InterPro domain Glycosyl hydrolase, family 13, catalytic region; (InterPro:IPR006047); contains InterPro Range:  from: 16673101    to: 16679572    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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