Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->CCA1(2)                                              --------->GLK1(1)                                             <---------ARR11(3)          <-------TEIL ------->ATHB12                          ---------->DOF2              <------MYB83 -------DOF2            --------->MYB46(3)   --------->ARR11(3)       <------MYB46(1) -----ANAC58    --------->MYB46(3)   <----------ID1                  --------->MYB59 -----ANAC58   --------->SPL7  <------ZmHOX2a(2)                   <---------ARR14(2) -----ANAC46  --------->MYB52(1) ---------->DOF2  ---------->DOF2  --------->ARR14(2)   ttgattgtagattagcgaacgactcatccatcgatcaaagagaaaaagatatcaaagaaaaacttagaagataggttcttctaatctcattcaaaaatcg  16619500                 <---------SPL7            --------->DAG2          ---------->DOF2     ----------->GT1                                                         --------->ANAC58    ------>ZmHOX2a(2)                                <---------ANAC58  <---------ANAC46    ----------->GT1                                  <---------ANAC58 <------NtERF2   <------ZmHOX2a(2)                        <---------LBD16         <---------DEAR3(1)  --------->ARR14(2)  <---------DAG2  <---------TOE2(3)        ------>ZmHOX2a(1)       ---------->DOF2  <---------ARR14(2)  <----------DOF2 <---------TOE1(3)     ------>ZmHOX2a(1)--------->ANAC58   ataagatcggaaaaaaggtcgtccctttttctgaatttttaaggtttctgggtttgcttctcctcctccgtcgtcgtggaagcaattgggaaaggaagag  16619600                                                                     <-------MYC2                                                                     ------->MYC2                                                                     <-------MYC3                                                                     ------->MYC3                                                                    --------->ANAC46                                                                    <---------ANAC55(2)                                                                    --------->ANAC58                    ------->MYC2                <-------MYC2        --------->ANAC55(2)                    <-------PIF5                ------->MYC3        --------->TGA1a                    <-------MYC2                ------->MYC2        --------->bZIP60(2)                    ------->PIF5                <-------MYC3        <---------TGA1a                    ------->MYC3               --------->ANAC58     =======================bZIP_bZIP                    <-------MYC3               --------->ANAC46     <---------O2 <---------O2                   --------->ANAC46            --------->ANAC58     --------->ANAC58                   --------->ANAC58      =====================================bZIP_DOF                   --------->ANAC58      =====================================bZIP_DOF               <------ZmHOX2a(2)         ---------->DOF2            --------->O2 <---------TGA1a ----              --------->ARR14(2)      <---------DEAR3(2)   <----------DOF2     ------>NtERF2  -------              <---------ARR14(2)      ----------->GT1      ===================bZIP_DOF      ---------            <---------HSFB2a(1)       <------MYB46(1)  --------->ZAT14         <---------RAP2.6(3)            --------->HSFB2a(1) *TSS  <------MYB83     <---------ZAT18       ----------------->AGL1      ---------->DOF2   <----------DOF2--------->At5g28300 ===================bZIP_DOF--------->PCF2  ---------->DOF2<---------ALFIN1    --------->MYB59   <---------ZAT14       <-----------------AGL1   aaactaaagaaagaacgatccacgcgctttcttagcaagtcggtaaaacacgcgctgttcactttcggacacgtgatttgccgacttgggcccagacaat  16619700                                                                    =================================                                                                    <---------TGA1a                                                                    <---------O2                                                                  <---------RAP2.6(3)        --------->ANAC58                                          ------>NtERF2                ------        --------->ANAC46                                        ----------------->AGL1         ------     <-------TEIL                                               <-----------------AGL1      <-------TEIL    --------->CCA1(2)                                  --------->YAB1                      --------->CCA1(2)   --------->ARR14(2)                                  ----------->GT1                    <---------GLK1(2)   <---------GLK1(2)                                 --------->ARR14(2)                   --------->ARR14(2)   <---------ARR14(2)                                <---------ARR14(2)             --------->YAB1 ----->YAB1                           --------->AHL20(2)  --------->ATHB12       --------->WOX13(1) -->WOX13(1)                          <---------AHL20(2) <---------YAB1        ------------>CBF------ --->CBF--------->ANAC58 ---------->DOF2            <---------GLK1(2)    --------->PCF2   <---------ARR14(2)   cacaagattcacacaagacttcaaaaacaaaggcccatatttaaattttgacccgaatcgtgatttgccgacttgggcccagacaatcacaagattcaca  16619800                                                         <---------WRKY18(1)                                                        ----------->HVH21                 <----------                                                      --------->O2             --------->ANAC58        ---------->DOF2                               <---------O2             --------->ANAC58 ==================bZIP_DOF               --------->AHL20(2)                   --------->ANAC46 --->ANAC58              <---------AHL20(2)  ------------>CBF                 *TSS        --------->ARR14(2) --->ANAC58              --------->AHL20(2) <-----------GT1                  <-----------GT1  ------>ZmHOX2a(1) --->ANAC46 ---------->DOF2               <---------AHL20(2)         <------ZmHOX2a(1)    <---------ARR14(2)   caagacttcaaaaagaaaggcccatatttaaaatttgacccgaattaaacaatccgacttgacccgtttgaggagaaattcactcaacagtgtttcctct  16619900                                                                    --------->ANAC46                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                  ------->GAMYB                                                                  <---------ALFIN1                                                                 <---------MYB55(2)                                                                 --------->MYB46(3)                                                                ------>MYB46(1)                                                                -------->P                                                                ------>MYB83                                                               --------->MYB55(1)                                                              --------->AtMYB61                                                              <---------MYB46(2)                          ------->GAMYB                       <---------MYB55(2)                         --------->ANAC46                     <---------MYB111(2)                       --------->MYB52(1)                ------>NtERF2                      <---------WRKY12               --------->ANAC58  <---------DAG2                      <---------WRKY38(1)            --------->ANAC58  <----------DOF2                   --------->At4g35610         --------->ZAT6 <---------MYB111(1)                ---------->DOF2              <-----------GT1  --------->DEAR3(1)             --------->LBD16           ----------->GT1   ----------->RAV1(1)<-----------GT1 -GT1       --------->LBD16  ------>NtERF2  <-----------GT1   --------->MYB46(3) <----------DOF2   cttcgtcttccctcccgagaaagctcaacggagccctagactggttttatcactctcgccaacaccaaccacgctttttctctctttacctccatttttg  16620000                                                   <------NtERF2                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                --------->LBD16                                                <---------ATERF1(1)                                                ------>NtERF2                                               --------->ANAC46                      <---------At5g28300                                               <---------ALFIN1              ------>NtERF2                                               --------->DEAR3(1)        --------->ANAC58                                             <---------ATERF1(1)         --------->ANAC46        --------->LBD16                      ------>NtERF2    <---------ARR11(3)    <-----------GT1      --------->At4g35610                  <---------ANAC58   --------->ARR11(3) <---------ICU4      <---------At4g35610        --------->MYB52(1)--------->LBD16       --------->ANAC58      <---------LBD16        --------->GLK1(1)--------->ATERF1(1)      ------>ZmHOX2a(1)  <-----------HVH21 --------->CCA1(2)      <---------ANAC58  <---------GLK1(1) <---------MYB59  <-----------TGA1 --------->ARR14(2) --------->ARR14(2) =====================HOX2a_HOX2a     ------- --------->ANAC46  <---------ARR14(2) <---------ARR14(2) <------ZmHOX2a(2)  --------->DEAR3(1)-------   tattcgtcaccggagtagatggatacgagagaaatcaacggttttgcctccgccgcgagatcgatatctcttcctacgcagcctaattacagtagcaagc  16620100               <----------DOF2                                               --------->At4g35610       <-------TEIL<-----------GT1                               <---------GLK1(1)      --------->ARR14(2)                                         --------->GLK1(1)      <---------ARR14(2)                                       <------ZmHOX2a(1)      <---------ARR11(3)                                     <---------TOE2(2)     <---------GLK1(2)                                       <---------TOE1(2)      --------->AHL20(2)   <---------TOE1(3)   <----------DOF2                       <---------TOE2(3)      <---------AHL20(2)  <-----------RAV1(2) <---------DAG2 --------->ANAC46<-----------RAV1(2)     <---------At4g35610 -->ANAC58     <---------DAG2     <---------ZAT14 <---------At4g35610     <-------TEIL -->ANAC58   --------->LBD16  <-----------GT1     --------->At4g35610 <---------TOE1(2)   ctgttcaggttcttccgctttatacctttttatttctccactgaattagtttagctcaggtcttaggatttctaggttcagcttaaaaaaatgggttttg  16620200                     --------->AHL20(1)                     <---------AHL20(2)      <---------ANAC58                                   -----                     --------->AHL20(2)      <---------ANAC46                      --------->ANAC55(2)          <---------AHL20(2)                 <---------ANAC58          --------->TOE2(3)       ------       ----------->GT1     <---------ANAC46 <------NtERF2              --------->TOE1(3)--------->ICU4       <---------ZAT6<---------AHL20(1)  <------ZmHOX2a(1)          <-----------GT1<---------ANAC55(2)   cagagcttagagttaatttcgaatttattgtttgtaacttacaggaggcgttgaaacatttggcatctataaacctcagagaattatgtaatgaggcaaa  16620300                                           --------->CCA1(2)                                          --------->ARR14(2)                                          --------->ARR11(3)                                          <---------ARR14(2)                                          <---------ARR11(3)                                      <--                                         <---------HSFB2a(1)                          <---------ZAT14                                --------->At4g35610                                   <---------ZAT18               ----------->RAV1(1)  --------->ALFIN1                           ------>NtERF2     <---            --------->AtLEC2    <---------At4g35610                     --------->WRKY18(1)      ----          <---------ANAC46      <---------ZAT2                         <-----------HVH21      ------- ---->DAG2<---------ANAC58      --------->ZAT2  --------->ZAT18     ------->MYC3      --------->ZAT14 ---->DOF2<---------ANAC58  --------->STY1(2)   <---------ZAT18     <-------MYC3      --------->ZAT18   agttgagcgatgtcgtgcaacaagagacttagctagctgtggaagatttgtgaactatgtgttgaatccatgtggtcatgcctccttgtgcacagagtgt  16620400  Previous    Next  AGI:  At2g39805.1    Description:  integral membrane Yip1 family protein. similar to integral membrane Yip1 family protein [Arabidopsis thaliana] (TAIR:AT5G27490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69133.1); contains InterPro domain Yip1 domain (InterPro:IPR006977) Range:  from: 16616993    to: 16619632    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39810.1    Description:  HOS1 (High expression of osmotically responsive genes 1). Identical to E3 ubiquitin-protein ligase HOS1 (HOS1) [Arabidopsis Thaliana] (GB:Q84JU6;GB:O22289); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAR07079.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48895.1); contains domain RING/U-box (SSF57850) Range:  from: 16619878    to: 16625135    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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