Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   <-                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                   <---------MYB46(3)       <---------ANAC58                     <XXXXXXXXXXXXXXXXXXXXXMIR850          <---------MYB52(1)       <---------ANAC46                  <---------DAG2                         <---------MYB46(3) --       <---------ANAC58                  <----------DOF2                    <---------WRKY38(1)    --     <---------ANAC46                 <---------ARR11(3)                    <---------WRKY12 --------   --------->ZAT14              --------->ANAC58                          <-----------HVH21  --------   <---------ZAT14              --------->AtLEC2                    --------->ARR11(3)      ------->TEIL  <-----------RAV1(1)           --------->ANAC58                    <---------GLK1(2)    --------->AtLEC2 -----ALFIN1                    --------->ANAC46                    <---------ARR11(3) <---------AtLEC2   acctgtgttgtgtatggttctacagggtctgtccatgcaataactttatagtagtttggatgttgcaaaagattttggtcatcggttgtgcatgcacgta  16601500       --------->ATHB12      <---------YAB1 --------ARR11(3) ----------ARR10 ->ANAC55(2) ->ANAC55(1) ->ANAC58                                                         <---------DAG2 --ANAC55(2)                                                      <----------DOF2 ------->ARR14(2)                   <---------ATHB12     <---------ATHB12 ------->ARR11(3)                 --------->WOX13(1)    --------->GLK1(2) ->ANAC58                    --------->ICU4         --------->HSFB2a(2)                         ----- ->ANAC46     <----------DOF2<---------YAB1         <---------HSFB2a(2)  ---------->ID1<---------YAB1   atatcttcacgattagctttgtttctatgtgatgatcaatctttctcttcccttcgcgaatcagtctccttttttgtctccctaagtttgtcattgagac  16601600                                            --------->AHL20(2)                                          <-----------TBP                                          <---------AHL20(2)                                          --------->AHL20(2)                                        --------->AHL20(2)                                      <-----------TBP                                      <---------AHL20(2)                                      --------->AHL20(2)                                    <---------AHL20(2)  <---------AHL20(2)                                    --------->AHL20(2) --------->AHL20(1)                                    <-----------TBP   <---------AHL20(2)                                  --------->AHL20(2)--------->AHL20(2)                                  <---------AHL20(2)<-----------TBP                                  <-----------TBP   <---------AHL20(2)                                <-----------TBP   <---------AHL20(2)                                <---------AHL20(2)<-----------TBP                                --------->AHL20(2)--------->AHL20(2)         --------->ARR11(3)   --------->AHL20(2)<---------AHL20(2)        <------MYB46(1)       <-----------TBP   --------->AHL20(2)        <------MYB83          <---------AHL20(2)<-----------TBP       --------->MYB59      --------->AHL20(2)--------->AHL20(2)     <---------MYB52(1)    --------->AHL20(1) <-----------TBP    <-----------HVH21      <---------AHL20(1) <---------AHL20(2)                          ------>ZmHOX2a(1)    <-------GAMYB         --------->AHL20(2)<---------AHL20(2)                            <----------DOF2   <---------MYB46(3) --------->AHL20(2)<-----------TBP<---------AHL20(1)      ---------->DOF2   <---   <----------DOF2    <---------AHL20(2)<---------AHL20(2)    <---------HSFB2a(2)     <---------ARR14(2) ---->GLK1(2)----------->GT1----------->TBP <-----------TBP   --------->HSFB2a(2)     --------->ARR14(2)   tctggctgttaggtcttgtgaattttaaatatatatatatatatatatatatatatatatatttctaggggaaactaaaaaaaaagagtatccttttatt  16601700                   <---------ANAC58                   <---------ANAC58                   <---------ANAC46               <------------CBF             --------->AHL20(2)             <---------AHL20(2)         <---------AHL20(2)                              <---------ICU4      <---------AHL20(1)                              --------->YAB1           ----------->GT1      --------->AHL20(1)                    --------->MYB52(1)                 --------->ANAC55(2)      --------->AHL20(2)                    ------>MYB83<---------YAB1         <---------ANAC55(2)    <---------AHL20(1)                      ------>MYB46(1)              --------->AHL20(2)    ------    --------->AHL20(1)                     --------->MYB55(1)      ------------>CBF           -------    <---------ARR11(3)    <---------At4g35610        <-------TEIL --------->ANAC46  --------->ZAT6    --------->ARR11(3)    --------->At4g35610     --------->HSFC1(2)     <---------AHL20(2)   <------ ------LBD16----------->TBP               <---------MYB59--------->YAB1 --------->AHL20(2)---------->DOF2   tcggaaaatattttataaattgcgtttgagatgaacaggctaaacctaacgaagtttcatcataatccaaacaatttaaataagtaatactaaaaagatt  16601800                                             ----------->TBP                                             --------->AHL20(2)                           --------->AHL20(1)                                            <---------AHL20(1)                            --------->AHL20(2)                                            --------->AHL20(1)                            <---------AHL20(2)   --------->GLK1(2)         --------->TOE1(1)                                           --------->AHL20(2) --->GLK1(2)             <-------TEIL      --------->AHL20(2)                      <---------HSFB2a(2) -->ARR11(3)      ------------>CBF   <------ZmHOX2a(1)         ----------->TBP     --------->HSFB2a(2) ---GLK1(2)      --------->ANAC46   ----------->GT1          <-----------TBP    <----------DOF2   ctgagaagcttaagagtaaacacaatatacatcgtatcaggaaaaatatatatagttagaggcatatatatcgaacttatttcttttagaaaaaaattaa  16601900                                --------->ANAC58                            --------->ANAC58                         <---------SPL7                        <---------ANAC46                        <---------ANAC58                       --------->WRKY18(1)                        <---------ANAC58                      <-----------HVH21                       <-------TEIL                        ------->MYC3                       -------                    <------MYB83--------->ANAC58           <-------MYC2                      --------                    <------MYB46(1)                        <-------MYC3                      --------                 <---------ANAC46                      --------->LBD16                      ------->TEIL                 <---------ANAC58                    <---------LBD16                  <---------MYB52(1)                 <---------ANAC58                    <-----------------AGL1          <-------GAMYB                 <---------AtLEC2    <---------At4g35610   ------->MYC2          --------->DEAR3(1)            <----------DOF2 --------->ANAC46         ----------------->AGL1      --------->ANAC46           <---------ANAC58 --------->ANAC58       <---------SPL7               <---------LBD16           <---------ANAC58--------->SPL7         <---------ANAC58--------->ANAC58------>NtERF2     <    <---------STY1(2) <---------ANAC46            <---------ANAC58--------->ANAC58--------->LBD16----   gtcactagctatggcttttgcttggtgcgtacgcaggtcagcatctaagttggcttccgcatgtggtcaagcccggtctatctccgccgttgtgaaccgt  16602000                                                <----------DOF2                                               <---------ANAC58                                          <---------TGA1a                                          <---------ANAC58                                          =================bZIP_DOF                                   <---------ANAC58                                ------>ZmHOX2a(1)                                ====================bZIP_DOF                        ============================MYC_MYB                        <----------CDC5   =================bZIP_DOF            --------->ZAT2                       --------->At4g35610================================MYC_MYB                       --------->LBD16    <---------ANAC58                     <---------ZAT2                       <---------At4g35610--------->TGA1a                      <---------At4g35610                   --------->ARR14(2)     <---------O2                    --------->At4g35610 -->DEAR3(1)       <---------ARR14(2)<---------CCA1(2)            <---------At4g35610 ->MYB46(3)     --------->ANAC46<----------DOF2<---------ANAC58   <-------GAMYB--------->At4g35610 ->DEAR3(2)  -------->P----------->RAV1(2)--------->O2    --------->ANAC46--------->ZAT2 ---------CCA1(2)<-----------HVH21 <---------ANAC58 <----------DOF2       <---------At4g35610   <---- ----->SPL7  =======================================MYC_MYB      <---------MYB46(3)           <------   ccgtctcttgctctcaacccgtctccgctgagtcctttcgtctctcgtggctttctttacacgatggctgttgataagctgagctctgagcaaacccttc  16602100                                                    <------MYB83                                                    <------MYB46(1)                                                    ----------->GT1                                                   --------->MYB59                                             <---------------AGL15                                             ----------------->AGL1                                             --------------->AGL15                --------->ZAT2              ----------------->AGL1      <---------WOX13(1)                    ----------------->AG                                    -    --------->ATHB12                        <-----------------AG                                  ---   <---------YAB1           <----------DOF2 <-----------------AGL1                         >>>>>>>>>MYB98 -----ALFIN1    <---------ZAT2              ------>ZmHOX2a(2)<-----------HVH21           ------>ZmHOX2a(1) -----HVH21     --------->At4g35610         ----------------->AGL2   <----------DOF2    <---------MYB59   accttgtgattgactccgagctcaattctgctttgcaaaccgatgatcccaatttggtaaaactttcacatctttgctcaaaatttcattcctaacaaaa  16602200                                        --------->YAB1          <---------ANAC46 <---------ANAC46--------->YAB1 -------->AHL20(2)     <----------DOF2 <---------YAB1      <----------DOF2        --------->GLK1(2) ------>TOE2(3)   <----------DOF2   --------->GLK1(2)--------->ANAC55(2)     ----------->HVH21 ------   cataaattagtatcgtttagctttactttgcgaataagtttctgataatattcttacgagacttttttttttttttgttctgacattctattggggtttg  16602300                              <---------HSFC1(2)                              --------->At4g35610                              --------->HSFC1(2)                              --------->HSFB2a(1)                              <---------At4g35610                              <---------HSFB2a(1)                           <------ZmHOX2a(1)                         --------->LBD16                        <------ZmHOX2a(2)    <------NtERF2       <-----------RAV1(2)                   <---------GLK1(1)   ------>NtERF2        <---------HSFB2a(2)           --------->ANAC58  <---------RAP2.3(3)   <---------LBD16          <----------ID1<---------ARR11(3) --->MYB52(2)   --------->CCA1(2)    <----------DOF2  --------->ANAC58----------->GT1               -   tttgggggcagaatgaagagatggctccaggaagcttccctttgaaaattagagacaagcctggagatcagagtgtaacattgacagcatattacaatga  16602400  Previous    Next  AGI:  At2g39782.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G39010.1) Range:  from: 16601115    to: 16601594    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39790.1    Description:  mitochondrial glycoprotein family protein / MAM33 family protein. Identical to Uncharacterized protein At2g39790, mitochondrial precursor [Arabidopsis Thaliana] (GB:O22288); similar to mitochondrial glycoprotein family protein / MAM33 family protein [Arabidopsis thaliana] (TAIR:AT2G39795.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69135.1); contains InterPro domain Mitochondrial glycoprotein; (InterPro:IPR003428) Range:  from: 16601911    to: 16602878    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version