Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->HSFB2a(2)                <---------HSFB2a(2)                <---------HSFC1(1)                                                            -------     --------->AHL20(2)                                              <----------DOF2        <-------- ---------HSFB2a(2)                                              ------>MYB83              <--------- -------->HSFB2a(2)                       --------->HSFB2a(2)    ------>MYB46(1)      <---------AHL20(2) ---DAG2        >>>>>>>ZML2               <---------HSFB2a(2)  --------->AtMYB61  <---------GLK1(2) ----DOF2 <-------TEIL              <-------TEIL            <-----------GT1    --------->ANAC46   ttctaaaaaaaattcgttctagatggatgctcttcaaattcgttctaaaaaaaactgacataataccatccctttaaaaacacagaattttttttatcat  16595400                                                     <---------MYB46(3)                                                   <-------GAMYB                                                  <---------MYB46(3)                                                  <-----------RAV1(1)                                              <---------YAB1                                        --------->AHL20(2)                               --------->YAB1                                      --------->TOE2(3)                                 --------->AHL20(2) -->YAB1        --------->ZAT6     ----------->RAV1(1)           <---------YAB1         <---------AHL20(2) ---GT1        <---------At5g28300--------->ANAC46--------->MYB52(2)         <---------ICU4<---------YAB1 --GT1   <---------ATHB12       --------->ANAC46<---------MYB52(1)         <---------ARR11(3)   ctctgaaacaaatcatttacagtagtaaatgtcaacacaacattaattctgtttgttgttggcatttacaattgcaaaatcattttctcatttattattc  16595500                                   --------->YAB1                  <---------ANAC58                                  <-------TEIL ---------->DOF2     <---------ANAC58              <---                              <---------ARR11(3)                   <---------ANAC46<---------ANAC46--                              --------->AHL20(1)              --------->MYB52(1) ----------->GT1 ----                              <---------AHL20(1)             <---------AHL20(2)  <------MYB46(1) ----  <---------AHL20(2)          --------->ARR11(3)        <---------MYB52(1)       <------MYB83    ----  --------->AHL20(2)  ---------->ID1      ---------->DOF2--------->AHL20(2)  --------->ATHB12    <---   gtatttattttgtcaagaacccttgtctctaaaatattcatagaaaaagaaaagagccattaattaatggcttgaagaaagattggtgtataagcgtcta  16595600                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---           --------->AHL20(2)                                                                  ------           <---------AHL20(2)                                                                  <-----          <---------AHL20(1)                                                                   <-----      <---------AHL20(2)                                                                       ------      --------->AHL20(2)                                                                      <------    <----------DOF2                                                                           ------- ------ANAC55(2)                                                                             <------- --------->HVH21                                                                          <---------AHL20(2) ----->ANAC46  <-----------GT1                                                            <---------YAB1 ----->ANAC55(2)       --------->LBD16                                                    --------->AHL20(2) ----->O2 --------->AHL20(2) --------->DAG2         --------->YAB1              <---------------AtSPL8 ------O2 <---------AHL20(2)---------->DOF2  ----------->GT1<---------YAB1      --------------->AtSPL8   cgtgacctttaattaatttacttcccccaaaaaagtcaacattcaacatgtgaataaaaatcaatattggtttctaagtaagtaagtaccatattattaa  16595700         ----------->GT1   --------->AHL20(2)   <---------AHL20(2)  <---------AHL20(2)  --------------->AGL15 ------->AHL20(2)     ------------>CBF                                                              - --------AHL20(2)    --------->ANAC46                                                               - -------AHL20(1)     --------->ANAC58                                                               < -------AHL20(2)     --------->ANAC58                                                               < ------>AHL20(2) --------->ANAC55(2)                                                             ---- --->AHL20(2)    --------->ANAC58                                                               <---- ----AHL20(1)    <---------ANAC55(2)                                                          ------- ----AHL20(2)    --------->ANAC46              <---------AHL20(2)                    --------->YAB1-- --->AHL20(1)    --------->ANAC58            ----------->TBP                    *TSS<---------ATHB12< ---AHL20(2)  --------->ARR14(2)         <---------ANAC46        <----------DOF2<---------ANAC58----- -->AHL20(2)  <---------ARR14(2)       ------->GAMYB ---------->DOF2----------->GT1 <---------YAB1--- --YAB1 --------->MYB59             --------->MYB52(1)      --------->ATERF1(1) <---------ANAC58<----   attatttattttggtaaatacgcactcaatttttctctcaacggtgtatataaacaaaaggagtctcctttggaaaaaacttgcctatcattttgccaac  16595800                                                                                               <-----                                                                                              -------                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                        ----------->HVH21                                      ------->GAMYB                                  ------>ZmHOX2a(2)                                     <------------AtMYB77                           --------->GLK1(1)     <----------DOF2            --------->bZIP60(1)                                 <------ZmHOX2a(2) -------->HSFC1(2)              --------->ANAC58                                    <---------GLK1(1) -------->HSFB2a(1)          ----------->HVH21                                     --------->AGP1 ---------KAN4(1)            ----------->TGA1                                      <---------AGP1 ---------HSFB2a(1)        ----------->RAV1(2)     ------>ZmHOX2a(2)               --------->ARR11(3) --->GAMYB              ---------->CDC5--------->At4g35610                         <---------ARR11(3) -----MYB55(2)       <---------ZAT2  --------->MYB46(3)                            --------->ARR14(2) -->MYB52(1)         --------->ZAT2--------->MYB52(1)                              <---------ARR14(2) ----->TEIL          --------->At4g35610          --------->GLK1(1)          --------->At4g35610 ---------HSFC1(2)   <---------At4g35610  <-----------RAV1(2)  <---------At5g28300<---------CCA1(2) < ---->MYB46(3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      <-----------GT1--------->ZAT2 ------>ZmHOX2a(2) ------>MYB52(1) <-----------GT1--------->ANAC58 --------->ARR11(3)          <---------ZAT2 <-------- -----MYB52(2)   --------->YAB1 --------->ANAC46 <---------ARR11(3)          <---------At4g35610    -   gaacgttctttcttcttaatcacagctcagcctgacgcaaccgctcaggctgatctcttccaatttacagccatttcccagctcagatctctgatccggt  16595900  ------>ZmHOX2a(2) <------ZmHOX2a(2) <---------GLK1(1) --------->GLK1(1) ------HVH21                    <---------ANAC58 -->LBD16            ------->PIF5 ---------ARR11(3)   <-------PIF5                       ------->TEIL -LBD16       ---------->DOF2   <---------ANAC58       <---------AtLEC2 -------->ARR11(3)  ----------->RAV1(2)            --------->CCA1(2)   <---------YAB1        <-------   gagatctctctcaaggtaatgcccctgcaattttgcttacttctctggttgtgatatgcatgttcttcgaattttcatcgtttgtgatttgaattctcat  16596000                                                               --------->HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------HSFC1(2)                     <---------AHL20(2)                        <---------HSFB2a(1)               <------MYB83               <---------GLK1(2)   <-----------ARR10               <------MYB46(1)     --------->LBD16            <---------ARR14(2)               <---------MYB46(3) --------->ANAC55(2)         --------->ARR14(2)           <-----------RAV1(1)    <---------HSFB2a(2)         <---------ARR11(1)           <---------MYB46(3)     --------->ANAC46            ------->TEIL         <-------GAMYB            --------->HSFB2a(2)        <---------CCA1(2)               <------- --YAB1 <-----------RAV1(1)      <---------LBD16             <---------ARR14(1)  <---------ICU4   <--   tttgtatttgctgttgttggtttttaattcgattttccggaacagattatgggatttgtattcgaatcttcgatttgatgacataatgtcccagcctttt  16596100                                                                                            <------MYB46(1)                                                                                         <---------ANAC46                                                                                    --------->ATHB12                                                                                   <---------AHL20(2)                                                                                  <---------WOX13(1)                         <-----------GT1                               <------MYB46(1)   <---------ANAC58                   ------->TEIL ------>ZmHOX2a(2)             --------->ZAT18   --------->ATHB12                <---------WOX13(1)                          <---------MYB46(3)<---------WOX13(1) ----              -------->HAHB4   <------ZmHOX2a(2)           <---------ANAC46 --------->ATHB12<------MYB83  <---------AHL20(2) <----------DOF2    ---------->DOF2>>>>>>>>>ARR2   <------MYB83--------->AHL20(2) ---DOF2      --------->ATHB12--------->ARR14(2)      --------->ATHB12<---------TOE2(3)  <---------ANAC58 -------YAB1 --------->ICU4   <---------ARR14(2)     <---------YAB1   --------->MYB59   --------->ATHB12   atgtttaatcttgaaatgatggacttttatccgatctgggtttaaagctggaattttgattgtgggtactattaggtttcattgatttattgcttggtcc  16596200                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                 <---------ARR14(2)                                                                                 <---------AGP1          <---------ZAT2                                                         --------->ARR14(2)          --------->ZAT2                                                  <---------AHL20(2)      <--          <---------At4g35610                                            --------->AHL20(2)       <--          --------->At4g35610                                            <---------AHL20(2)      <---       <---------At4g35610                              <-----------RAV1(1) <XXXXXXXXXXXXXXXXXXXXMIR865-5P     <-----------GT1  --------->ARR11(3)            <---------YAB1      <---------WOX13(1)    <------ ------->RAV1(1)     <---------At4g35610   ---------->DOF2           <---------YAB1------>ZmHOX2a(2)   aacatttttagcagctggtattgagctcttgttgtctgaattttggaaagaactatttttgttgtatcgttttgatttatttggatctgaattcattcac  16596300  Previous    Next  AGI:  At2g39770.1    Description:  CYT1 (CYTOKINESIS DEFECTIVE 1); nucleotidyltransferase. similar to GDP-mannose pyrophosphorylase, putative [Arabidopsis thaliana] (TAIR:AT3G55590.1); similar to GDP-mannose pyrophosphorylase [Malpighia glabra] (GB:ABB53473.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69137.1); similar to GMPase [Medicago sativa] (GB:AAT58365.1); contains InterPro domain Nucleotidyl transferase; (InterPro:IPR005835); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 16595780    to: 16598063    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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