Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->DEAR3(1)                                                                             --------->MYB46(3)                                                                             ------->GAMYB                                                                             --------->At1g77200                                                                             --------->DREB2C(2)                                                                             ----------->HVH21                                                                            --------->DEAR3(2)                                                                          --------->AtMYB61                                                                          --------->DEAR3(1)                                                                          <---------ALFIN1                                                                         <---------MYB55(2)                                                                         --------->MYB46(3)                                                                         <---------ABI4(2)                                                                        <---------ATERF1(1)                                                                        ------>NtERF2                                                                       <---------ALFIN1                                                                       --------->DEAR3(1)                                                                     <---------ATERF1(1)                                                                     <------NtERF2        --------->ALFIN1                                             ------>NtERF2        ----------->HVH21                                           --------->ANAC46         <-------        <---------REM1(1)                                           --------->ANAC58         <-------      --------->At4g35610                                        --------->ARR14(2)          <-------     --------->ALFIN1                                            <---------ARR14(2)         ---------    <------ZmHOX2a(1)                                            --------->REM1(2)      <-------GAMYB  --------->ALFIN1                <------ZmHOX2a(1)           <---------ANAC58         <---------MYB46(3) <------ZmHOX2a(1)              --------->ALFIN1  --------->TOE2(3) --------->ANAC58   --------->MYB111(2) ------->ALFIN1              --------->ALFIN1     --------->TOE1(3)--------->SPL7     <--------P ------>ATERF1(1)           <------ZmHOX2a(1)     --------->AtMYB61--------->ZAT18   <-------GAMYB ----NtERF2            --------->ALFIN1        <---------ALFIN1--------->LBD16      <---------MYB46(3) ---->ALFIN1        --------->ALFIN1      --------->At4g35610 <---------ANAC58--------->MYB52(1) -----DEAR3(1)     <------ZmHOX2a(1) <------ZmHOX2a(1)       <---------LBD16--------->MYB46(3)    <-- ---RAV1(2)  <------ZmHOX2a(1) <------ZmHOX2a(1)  <---------DAG2 <-----------HVH21 <---------TOE2(2)   ggaggaggaggtgaaggagaaggaggtggaggaggaggaggattagcttccaccttaaccttctccgtgtccgccaccaccgacggaggttgttgtcgta  16589100     <------NtERF2                                                                                  -    --------->LBD16                                                                                 -   <---------ANAC46                                                                              <---   <---------DEAR3(1)                                                                            ----   <---------ANAC58                                                                           =======   <---------ANAC58                                           <---------MYB52(1)              ------>ZmHOX2a(2)  <---------LBD16                    --------->ATHB51    --------->GLK1(2)                  --------- --ANAC46                            <---------ICU4 ---------->DOF2                      --------->LBD16 --ANAC58                   --------->MYB52(2) <---------AHL20(2)        ----------->HVH21  <-------- --ANAC58    --------->WOX13(1)  <------ZmHOX2a(1) <---------AHL20(2)  <---------ANAC46 <---------LBD16 ->ID1   --------->GLK1(1)<--------P--------->ICU4 --------->AHL20(2)  ----------->GT1 <---------LBD16 ---------RAV1(1)       ----------->GT1        --------->AHL20(2)<---------YAB1      --------->AtMYB61   ttgtggcggggatttcaatctgggtatggttagtaggaattatcgctgataaattaaagactctgttactattcggtgaaacggagacctccgggatcga  16589200        --------->ALFIN1   --------->LBD16  <---------HSFB2a(2)  --------->HSFB2a(2) ----------------->AGL1 <---------LBD16 <-----------------AGL1                      <-----------HVH21 -------->MYB52(1)                 <---------MYB46(3)                              ----------->TGA1 ------->P                         <------MYB46(1)                                 ----------->HVH21< ------At4g35610                   <------MYB83 <---------SPL7                    <------------------ ----->ZAT2                    <-----------RAV1(1)                              <---------DEAR3(1) -- ======================HOX2a_HOX2a<---------AtMYB61      <---------ANAC58     --------->MYB52(1)  <-- >ARR14(2)                     <---------MYB46(3)        <---------ANAC58    ----------->HVH21   <--- -ARR14(2)      <------ZmHOX2a(1)<---------MYB52(1) --------->AtMYB61    ---------->DOF2      -------   gctaccggaagtggaagaggagaagaagacgagctgttggtagccatcgtcggaccaatgcttgcctaagtagaagaaagcgacggtgacgaaaactaag  16589300     ------>ZmHOX2a(2)                                                                    ===========    <------ZmHOX2a(2)                                                                     ------>ZmHOX2a(2)   <---------ARR11(3)                                                                    <---------At4g35610   --------->ARR14(2)                                                                   --------->ARR14(2)   --------->AGP1                                                         <------ZmHOX2a(2)   <------   <---------ARR14(2)                                                    <---------ARR14(2)   -------   --------->ARR14(3)                                                    --------->ARR14(2)  <-------   --------->ARR11(3)                                                   <------ZmHOX2a(1)<---------GLK1(1)   <---------ARR14(3)                                                   =================HOX2a_HOX2a  --------->GLK1(1)                    <---------MYB52(1)               ================HOX2a_HOX2a  <---------GLK1(1)             <---------ARR14(2)                 ----------->HVH21    <---------ARR14(2) ----------->ARR10     --------------------->WRI1              <---------ANAC55(1)      <---------ARR11(3) ------NtERF2         <---------ARR14(2)                       <---------ANAC58         <---------AGP1 ---WRI1              --------->ARR14(2)   <---------ZAT6      <---------ANAC58     <---------LBD16 ------->LBD16     <---------ANAC46    --------->ICU4          <---------ANAC46   ------>ZmHOX2a(2) -------ANAC46    <---------LBD16 ------>ZmHOX2a(2)        <---------ANAC58      <------ZmHOX2a(2)<-- ------LBD16     --------->ALFIN1<------ZmHOX2a(2)         <---------ANAC58  --------->At4g35610  <-- --->DOF2       --------->ALFIN1--------->ARR14(2)   --------->ATHB12   =========================HOX2a_HOX2a   gcggagatcttgatcagagttggggatttgaacagatcgccattagtgagaggcttcattagcttgcgtgtgaaggatcagcgatctctggatctgcgta  16589400                                                                           <-----------GT1                                                                          <---------ICU4                                                                          --------->YAB1                                                                   --------->At5g28300                                                                  <------MYB83                                                                  <------MYB46(1)                                                                  ----------->GT1      <---------ANAC58                                           --------->MYB46(2)      <---------ANAC46                                           --------->MYB59      <---------ANAC58                       <----------DOF2     <---------MYB46(3) <---------MYB46(3)      <---------ZAT6     <---------ANAC46    --------->SPL7 ======================HOX2a_HOX2a          <---------ANAC58    <---------MYB55(1) ---ZAT14            <---------YAB1         <---------ANAC58   <---------MYB52(1) *TSS   --------->GLK1(2) -->ZAT14          --------->ATHB12    <-----------RAV1(1)    <---------SPL7<---------YAB1 --ANAC46         <---------YAB1       <---------MYB46(3)    <---------ANAC58    --------->ZAT14 ---------RAV1(1) --------->ICU4  <---------At5g28300        <---------ANAC58    <---------ZAT14 -------ZAT6    <------ZmHOX2a(1)<-----------GT1             <---------ANAC46--------->ZAT6   gtgttgttgtgtgagagaggatgattagtgtaattttacagttgttgcttttggatttttctggcgttcggtaaaattatcactacagaagaatttgcag  16589500                                                                        --------->ARR11(3)                                                                 ----------->GT1         xxxxxxxxxxxx                ---------->DOF2                                <---------ANAC46          xxxxxxxxxxxx            <------ZmHOX2a(2)                      ------------>CBF     <---------ARR11(3)xxxxxxxxxxx           <---------ARR11(3)           ---------->DOF2        <---------ANAC58         xxxxxxxxxxxxx           --------->ARR11(3)        ----------->TBP      <---------ANAC58              xxxxxxxxxxxxx       ---------->DOF2               <---------AHL20(2)   <---------ANAC58        --------->At4g35610  ----------->GT1                <-----------TBP<----------DOF2<---------ANAC58   <---------At4g35610   aatttagttaaaagatcagaaagttgcagagagttttatataaaaagggtcttttcaatagcatgtcttgttaaaatctaattcagcaaaaaaaaaaaaa  16589600                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                       <---------WOX13(1)              <---------YAB1               --------->YAB1                            --------->ATHB12       <---------------AtSPL8             --------->ICU4                            <---------YAB1   --------->AHL20(2)            <---------DOF5.7(2)                              <---------ANAC55(2) xxxxxxxx>smallRNA(le3)        --------->DOF5.7(2)      <-----------GT1           --------->ANAC55(2) xxxxxxxxx>smallRNA(si3)      --------->TOE2(3)     --------->ARR11(3)          <---------ICU4 xxxxxxxxx>smallRNA(le3)      --------->TOE1(3)     <---------ARR11(3)          --------->YAB1    --- xxxxxxx>smallRNA(le3)----------->GT1     <---------ATHB12                     <---------ATHB12------ xxxxxxxx>smallRNA(si3)     <---------TOE2(3)<---------YAB1                 <---------AHL20(2)<------   aaaaaaaaaatagtacatgatagtttgttaaacgttatcggcaaatgatgaaaagattttactaaaaactggttttttttaatcatgtgattgaatataa  16589700          --------->AHL20(1)                                   <---------AHL20(2)          <---------AHL20(1)                                   <---------ICU4       --------->AHL20(2)                                     --------->ICU4    --------->YAB1                                            --------->AHL20(2)   <---------YAB1 <---------ICU4                                             --------->YAB1        --------->AHL20(2) --AHL20(1)                                       --------->GLK1(2)               <---------AHL20(2) ->AHL20(1)        <<<<<<<<<MYB98        --------->ZAT18 --------->YAB1          --------->YAB1     - ->AHL20(2)--------->AHL20(2)        --------->DAG2      ----------->GT1      --------------->AGL15 < ------>YAB1     <---------YAB1     ---------->DOF2  <---------YAB1          <---------YAB1         < --->YAB1 <---------AHL20(2)    <---------YAB1   <---------GLK1(2)         <-----------GT1         -- ---AHL20(2)    <---------TOE2(3)--------->YAB1----------->ARR10  <---------AHL20(2)   --------->AHL20(2)   tcatatttataaaatatttatgttaaatgttcttatgataaagtgcgatgagattctaatagtaataaatatttgttttactattaaaattatatcacac  16589800                                                       --------->ANAC46                                 <---------------------WRI1                               <---------MYB46(3)     <---------LBD16                              <---------YAB1        <---------ARR14(2)     --------->ZAT14       <---------AHL20(2)       --------->ARR14(2)                  <---------ICU4     <-------TEIL          <---------YAB1         --------->LBD16                       --------->ATHB12  <---------MYB46(3)      --------->AHL20(1)     <---------ANAC46                       --------->YAB1 <---------DEAR3(1)       <---------AHL20(1)  <---------ARR14(2)                        -------->ATHB1 -------->ZAT14           --------->AHL20(2)  --------->ARR14(2)                       <---------YAB1 ---------ZAT14         ------->TEIL         <---------GLK1(1)                 <---------MYB59     -- ---------ZAT18      <---------ATHB12   --------->ZAT18--------->ANAC55(2)     --------->TOE2(3)   << ------->ALFIN1--------->AtLEC2--------->ATHB12  <---------ANAC55(2)           --------->TOE1(3) <---   agtgcggttcagtcttcatgcaaatgaatataatggttgaagcgaacaaatccgtatacggattaaaacgtttttcatttacctaaaaaatcattgtaaa  16589900                                --------->ATHB12                           <---------AHL20(2)                           <---------YAB1      <-------GAMYB                                  <------                          --------->AHL20(2)  --------->MYB52(2)                             <-------                          <---------AHL20(1)  <---------MYB46(3)                        --------->GLK1(1) ------->MYB52(1)         --------->AHL20(1)<---------MYB52(1)                         <---------ARR14(2) <<<<<<<<<<<<<<<LFY      --------->YAB1   <---------MYB46(3)                      --------->MYB52(1) ------MYB52(2)<-----------GT1<---------WOX13(1)                   --------->MYB52(1)  --------->ARR14(2)   ctaacaatggattgtttttacatacaaatataattgatttgtagcggtttgttgtccatcttgtagatgaaacggactaatcgcaaacggatttgtccac  16590000  Previous    Next  AGI:  At2g39750.1    Description:  dehydration-responsive family protein. similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT5G06050.1); similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G77260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61931.1); similar to hypothetical protein OsJ_003963 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69144.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 16585902    to: 16589482    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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