Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ------->TEIL                            <---------SPL7                           --------->ANAC55(2)                      <------MYB83                                 ------>ZmHOX2a(1)                      <------MYB46(1)                             <---------ALFIN1        ---------->DOF2    <---------ANAC55(2)               --------->ANAC58  <---------SPL7     <---------AtMYB61                       --------->ANAC58 <---------ANAC46 --------->ALFIN1                       ------->GAMYB --------->DEAR3(1) <--------P--------->SPL7            --------->MYB46(3) ------NtERF2   <---------ANAC58                      <---------ARR14(2)        --------->AHL20(2) --------ZAT18  <---------ANAC46                   --------->TOE2(3)        --------->AHL20(2) ---->NtERF2  --------->At4g35610                  --------->TOE1(3)  ------>ZmHOX2a(1) ------>DEAR3(1)<---------ANAC58  <---------MYB52(1)  --------->ARR14(2)   --------->ICU4         <-- ------------------WRI1 --------->PCF5           <---------At5g28300----------->RAV1(2)    ----------   gcgccgtactcaaagcagccgtgttggtcccgtacccttggctgtataggttaccgtaaccacaagctcctcctgtaatgaattaaactcattttgttaa  16552300                                                                                      <---------ATERF1(1)                                                                                      ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                  <---------DEAR3(1)                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                <-----------HVH21                                                                                <---------ATERF1(1)                                                                               <---------ANAC58                                                                               <---------DEAR3(1)                                                                               <---------ANAC58                                                                              <------NtERF2                                   <---------YAB1                             --------->ATERF1(1)   -                                  <---------AHL20(2)                        <---------DEAR3(1)   ----                                  <---------AHL20(1)                       <------NtERF2    ---------                                  --------->AHL20(1)                       --------->ATERF1(1)  -----    --------------->AGL15        --------->AHL20(2)                       --------->LBD16  ----------    <----------DOF2              <---------AHL20(2)                       <---------SPL7  <------NtERF2    <---------------AGL15        --------->YAB1                          <---------ANAC46------>NtERF2 -------ICU4                 --------->AHL20(2)               -------->P<---------LBD16 <---------ALFIN1 ->GT1--------->AHL20(2)     <---------AHL20(2)            <---------MYB52(2)<---------ATERF1(1)=====   aaatgacttttaatagaaaactttatactaaaaaattatatttatgctctgtttttatgggactaacccattgtgccggaggcgtcgctgccaccgtaaa  16552400                              ----------->GT1                            --------->LBD16                           --------->DEAR3(1)                          --------->ATERF1(1)                          <------NtERF2                          --------->RAP2.3(1)                          <---------LBD16                         ------>NtERF2  <---------LBD16                        --------->ATERF1(2)                        --------->RAP2.3(3)                        --------->RAP2.3(2)                        --------->RRTF1(3)                        --------->RRTF1(2)                        <---------ATERF1(2)                        <---------DEAR3(1)                        --------->DEAR3(1)                       --------->RAP2.6(1)         <---------ANAC58--------->ABI4(1)     --------->ALFIN1  --------->ERF1   --------->LBD16   <---------O2        <------NtERF2   <---------LBD16  <------NtERF2   <---------ANAC58    --------->ATERF1(1)            <---------DEAR3(1)   <---------bZIP60(2) --------->RRTF1(1)             --------->DEAR3(1)   <---------ANAC58    --------->DEAR4(2)             <---------At1g77200   <---------ANAC46    --------->DEAR3(2)           <-----------HVH21   <---------TGA1a     --------->RAP2.3(1)         <---------ANAC58   <---------ANAC55(1) --------->ORA47(2)          <---------ANAC58  <-----------------------TaNAC69(2)   <---------ANAC46------>NtERF2 -------->ALFIN1      <---------ATERF1(1)    --------->GLK1(2) ----->DAG2           <---------RAP2.3(1)--------->LBD16<---------------------WRI1 >At5g28300        --------->AtLEC2   <---------LBD16--------->ATERF1(1)        --------->At5g28300 ----->DOF2   <-----------GT1<------NtERF2  <---------ARR14(2)       <----------ID1          <------- ->GT1   <---------ANAC58<---------ATERF1(1)--------->ARR14(2)    ---------->DOF2            <------- ============bZIP_DOF--------->ANAC46--------->MYB52(1)<---------DEAR3(2)      ----------->GT1   aagtggcgtgtgcgttttgccatgcgccgccggagtaaataccggggattctagcgtcggcgaggctaaaaagaacaaatgtggtaaatagaattgctag  16552500                         <---------------AGL15                         <---------HSFB2a(2)                         --------->HSFB2a(2)                         <------ZmHOX2a(1)             <---------ANAC58                                      <---------TOE1(3)             <---------ANAC46              <---------TOE2(3)       <---------TOE2(3) --ANAC58    <---------ANAC58              <---------TOE1(3) <---------WOX13(1) --ANAC58  <---------ANAC46               ---------->DOF2  <---------MYB46(3)    ---------->DOF2-----   tttaatagccattttgtgtgtgaattactagaaacagagagttttaaagttactatgagggtgattgttaaggagaaaatgaagaaagaacaagagcgcc  16552600                                                               <------ZmHOX2a(1)      --------->ICU4                                                          --------->ALFIN1           <-----------TBP                                         <---------WOX13(1)   *TSS                <---------MYB52(1)                                       --------->ATHB12 <------MYB46(1)          <------MYB46(1)                                    <-------GAMYB       <---------MYB46(3)       <------MYB83        <---------ZAT18            <---------MYB46(3)   <------MYB83            --------->MYB59   <---------ANAC58                --------->MYB52(2)  --------->ALFIN1        <-------TEIL   <---------ANAC58            <------MYB83            <---------AtMYB61      <---------ARR14(2)  --------->ZAT2               <------MYB46(1)     <---------TOE2(3)         <---------SPL7  <---------ZAT2              --------->MYB59  --------->CCA1(2)         --------->ALFIN1         --- ---->DEAR3(1)        ---------->DOF2 <---------YAB1 <------ZmHOX2a(1)<------ZmHOX2a(1)     <--------   ttcgagcttgcgctcttgtatagagaaagagttaggtttgttgattgagagatgaggatggtggaggaagaaggagtgaggttcggtatttatggaggga  16552700                                         <---------WOX13(1)         ---------->DOF2                                        <------------CBF     <----------DOF2                                       --------->ATHB12  <-----------GT1                       <-----       ---------->DOF2                <---------YAB1 <---------AHL20(2)                  <---------YAB1 -------->GT1                         --------->ICU4--------->AHL20(2)             --------->AHL20(2) -ANAC46       <---------ZAT6 <------ZmHOX2a(2)     <---------AHL20(2)----------->GT1    <---------TOE2(3)   aggaaactccaaagttagagtgagagagagagatcgagagataattggctaaattttaatttccttttgtcaaagttaaaacttttaaaataagattact  16552800                   <------MYB83                   <------MYB46(1)                  --------->MYB111(1)                  --------->MYB59                  --------->MYB46(2)                 <---------MYB55(1)                 <--------P                                                               <---------ARR11(3)              <---------AtMYB61                                                           --------->ARR11(3)           --------->ALFIN1                                                               <---------AHL20(1)        --------->DAG2                       <---------AHL20(2)                           --------->AHL20(2)        <---------AtMYB61                   <---------AHL20(2)                            <---------AHL20(2)    --------->ANAC58                     --------->AHL20(2)                     <---------ICU4    <---------ANAC55(2)             ---------->ID1                           -------->HAHB4    --------->ANAC55(2)        <---------MYB52(1)                            --------->YAB1    ------    --------->ANAC58        <------------MYB.PH3(1)                         <---------YAB1--------->AHL20(1)    --------->ANAC46       <---------At5g28300 <---------TOE2(3)          --------->YAB1 --------->AHL20(2) ----YAB1<---------ANAC46 <-----------GT1<---------AHL20(2)              <---------AHL20(2)  <-------   atttctacgtaaggtggaggtaggtttgtaaccgttttgtcatttttttaatgtaatctaattttcttagatgatataatgatacttacaaatatattat  16552900                                                                  <---------GLK1(2)         ------>ZmHOX2a(1)                                    ---------->DOF2              <---------ANAC58         --------->LBD16                             --------->DAG2                        <---------ANAC58        <---------LBD16                             ---------->DOF2             --------->TOE2(3)     <---------ARR14(2)                        <---------------AGL15            <---------MYB59 --->ARR11(3)                                  --------------->AGL15        --------->WRKY12 --AHL20(2)       <---------YAB1              ----------------->AGL3        --------->WRKY38(1)   ctcgttgaatcctggattttaaaattggtaagacttggaaattttgatgctaaaaaaagttcgacaaagaatatcgagttgaccttatttgaggcgtttc  16553000                                                                          ----------->GT1                                                                      --------->AHL20(2)                                                                      --------->AHL20(1)                               <---------AHL20(2)                     <---------AHL20(2)                               --------->AHL20(2)                  ------>MYB83                               <---------AHL20(1)                  ------>MYB46(1)                       <---------DAG2                      <---------At4g35610                       <----------DOF2          ------->TEIL     <---------MYB59            <-------- --------->ICU4     <-----------GT1 <---------AHL20(2)     --------->At4g35610      --------->YAB1   atacttatgaagagaggttatcttactttatattttattttatacaaatgtatgtttgttttgctgaccaaataaaatgtaaacatttataagcctttaa  16553100                                          <---------ZAT18                                     <---------ANAC58                                   <-----------GT1                          <----------DOF2<---------ANAC58                          <---------DAG2 <---------ANAC46                       <-----------GT1   <---------ANAC58                                        <---   <----------DOF2   <-----------GT1 <---------ANAC58                                      --------->TOE2(2) --DOF2      <---------ZAT2       <-----------GT1            ----------->GT1             ------->TEIL   tatgtcttttgactctgctcgtttttcactttttttttaacttgcgcgcgtagtctagttcaaaggtgaattgtcttatgcaaattccatgaatctacgt  16553200  Previous    Next  AGI:  At2g39700.1    Description:  ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4). Identical to Expansin-A4 precursor (EXPA4) [Arabidopsis Thaliana] (GB:O48818;GB:P80837;GB:Q8LDZ1); similar to ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) [Arabidopsis thaliana] (TAIR:AT3G55500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21642.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro: Range:  from: 16550910    to: 16552662    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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