Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ----------->GT1                                                                   --------->WRKY18(1)  <---------At4g35610 --------->ICU4                                           <---------------AGL15         --------->At4g35610 -------->DOF2        <-----------HVH21     ---------->DOF2 <---------YAB1    <-----------GT1     --- ---->GT1 <-----------HVH21      ----------->HVH21       <-----------------AGL2       <---------HSFB2a(2)   gaaaagatgaaatgtcatcgaatgggtcagtctgtctgacactgtgcaaagcgttatggactatttttggtcaaacagttaaactatttcagaagaacaa  16547800                                  --------->TGA2(2)                                 <-----------HVH21                                 <-----------TGA1                                <---------ANAC55(2)                                --------->ANAC46                                --------->ANAC58                                --------->ANAC55(2)                                <---------O2                                <---------TGA1a                                <---------bZIP60(1)                                --------->ANAC55(1)                                --------->bZIP60(2)                                --------->TGA1a                                --------->ANAC58                        --------->ANAC58                           <---------GLK1(1)                            --------->ANAC46         <---                    --------->ALFIN1      ------>NtERF2                 <----------ID1           ----                <---------At5g28300      <---------ALFIN1          --------->YAB1                ----             <----------DOF2    --------->O2                       <---------ICU4                <---          <---------ARR11(3)    --------->bZIP60(1)               --------->ICU4                <----          --------->ARR11(3)  <---------DOF5.7(2)--------->ANAC46 <---------YAB1      <----------DOF2 ------>YAB1 =============================bZIP_DOF  --------->GLK1(2)   --------->ANAC58     --------   tcgaaaccaagaggtctttacggtgatggagttcacgtcatggccacctctaagaaactgtgtttgtaattataacgccaagtctactctttttatcaga  16547900                                                               ----------->HVH21                  <---------MYB52(1)                         --------->O2                 ------>NtERF2                               --------->TGA1a          <---------MYB52(1)<---------TGA1a                  <---------O2         <-------GAMYB      --------->TGA1a                  --------->ANAC55(2)         --------->At5g28300--------->O2                     ==========================bZIP_DOF      ------>NtERF2         <---------O2                     <---------TGA1a      --------->LBD16       --------->ANAC55(2)              =======================================MYC_MYB    --------->MYB46(3)      ====================================MYC_MYB    ------>ZmHOX2a(2)       ==================================MYC_MYB  <---------ARR14(2) --------->ANAC58                    --------->TOE2(3)  --------->ARR14(2) --------->ANAC58                    --------->TOE1(3) ------ARR14(2)  --------->LBD16                       -------->P ----->ARR14(2) <---------LBD16                        ================MYC_MYB ----->GLK1(2)  <---------ETT(1)                      =================MYC_MYB              --------- --------ARR10 --------->RAP2.6(3)                    ------->GAMYB                    ============== -----GLK1(2)  <---------LBD16   <---------ANAC46    --------->MYB46(3)                <------------MYB.PH3(1) ->YAB1  =============================MYC_MYB        <---------MYB111(2)    ---------->DOF2 <--------   atctgatccgccgttattccggcaagtctcatgtgacttacattatcccttcttaacaacctcaagtgaccaaaaaacaaaagtcaataactgttttaat  16548000                            ------->MYC3 --------->YAB1                            <-------MYC3<---------YAB1                           ================================bZIP_DOF                           --------->TGA1a            =========================bZIP_DOF        ------>MYB46(1)    <---------TGA1a        ------>MYB83  --------->PCF2  --------->YAB1      ----------->HVH21    --------->O2 --------->ICU4      --------->DEAR3(1)  <---------TOE1(2)     --------->MYB46(3)   <---------TOE2(2)                                     <---------YAB1     --------->DEAR3(2)  <---------ALFIN1<---------ICU4                        <---------TOE1(2) >AHL20(2)  <----------DOF2<---------O2 <---------ATHB12                       <---------TOE2(2) ====================================MYC_MYB                       --------->ARR14(2) -AHL20(2) <-----------------AGL3 --------->ZAT6<----------DOF2   <---------MYB52(1)   actccgaaccgacccttttaatggctcccacgtttcactctaatcattctctttctctacttagacccgtttccttcttcttatgtttctctgaaactca  16548100                                                                                                 ----                                                                                                 <---                                                                                                 ----         <-----------ARR10           <-------TEIL                            ------->TEIL       <----         --------->ARR14(2)       <---------At4g35610                     --------->ANAC58   --------         <---------ARR14(2)       --------->At4g35610            <------ZmHOX2a(1)         --------->ANAC58        <------ZmHOX2a(1)  --------->YAB1                     *TSS   <------ZmHOX2a(1)  ------>ZmHOX2a(1)      <---------TOE2(3)   <-------TEIL   ----------->GT1  <---------ANAC46--------->ANAC58 --------->ANAC58   tgaaatttgaggaactactcatggaagattcatcacagctacatagtaacaagagacatgacttagaggaaggagtaagcacctctgttcctcactcaaa  16548200           --------->AHL20(2)           <---------AHL20(2)           --------->ATHB51           <---------ICU4           <--------ATHB1          <---------ATHB51                                                                        <--          <---------ATHB12                                                                       <--- ----->ARR11(3)                                                                                  <--- ------ARR11(3)                                                                       <----------DOF2 ----->GLK1(2)                             ------->TEIL                               <---------DAG2 -----GLK1(2)                      <------MYB83 ---------->DOF2    >>>>>>>>>TBF1   <<<<<<<ZML2   <--- ->YAB1   --------->ICU4           <------MYB46(1)             <------ZmHOX2a(1)   <---------ARR11(3)   atctctataccaataatttgaatgtttgtgtttatgtaggtgatgcatcttaaagagagactagaggaagaagaagcagtgactagaactttacgagttg  16548300                                                                                                 ----                                                       --------->ANAC46                     ---------                                                       --------->ANAC58                     ---------                                                       --------->ANAC58                     <--------                                                   --------->AtMYB61                        <--------        <----------DOF2                           --------->ANAC46 --------->YAB1          --------->ICU4 --------DOF2                                   <---------ALFIN1  <---------ATHB12    --------->YAB1 ------ANAC58                      <---------YAB1 --------->bZIP60(2)                 --------->TOE2(3) ------ANAC58             --------->O2         <-----------------AGL1 --------->YAB1 ----------->GT1 ------ANAC46   <-----------GT1    ------>ZmHOX2a(1) <-----------RAV1(2)        --------->ANAC55(2)   cttttgatggctctattgtttctctcccaagtctctcctcattgtttcttccacctcaggcaataccaataaacataacctcacataatgttaattattt  16548400                       --------->AHL20(2)   -------->HAHB4      <---------AHL20(2)   --------->YAB1   --------->ARR11(3)                                          --------->GLK1(2)  --------->ICU4    <---------ARR11(3)                      --------->ANAC58   <---------GLK1(2) ----->TOE2(3)    ----------->ARR10                         --------->ANAC58   --------->ARR14(2) >AHL20(2)    <---------ICU4                            <---------ARR11(3)   ----------->ARR10 >ATHB51      --------->YAB1                            --------->ARR11(3)  <------NtERF2     ------- -AHL20(2)   --------->ICU4                  --------->At4g35610         <------NtERF2   --------->HSFB2a(2) -ICU4       <---------ATHB12                <---------At4g35610  <---------ANAC46       <---------HSFB2a(2)   cttaatgatcaaacaatgatgagattttattgttcaacagttttctgagctcatacaagaactagccatcgtggaggcagagattctctgtctagaccga  16548500                                                                                <------ZmHOX2a(1)                                                                          --------->At4g35610                                                                       --------->ZAT2                                                                --------->WRKY12<<<<<<<<<<<<<<<<<LFY                                                     <-------TEIL      --------->At4g35610                                           --------->ANAC58     ----------->HVH21               --------->TOE1(3)           --------->ANAC58     --------->WRKY38(1)        --------->At4g35610                --------->ANAC46   --------->At4g35610      <------ZmHOX2a(1)                  --------->MYB52(1)   <---------At4g35610         --------->ANAC58 ---->GT1  ---------->DOF2          <----------ID1  --------->CCA1(2)  <---------ZAT2     --------->ANAC58   aaaatcgaggagctaaagcttaaactgtattccgaacagagacaaacgcaagagatacaattgcagatgaccgagcagaagaggacattggcaagacaga  16548600              <---------ZAT14                    <----------DOF2            <---------ZAT18                     ------>ZmHOX2a(2)          --------->ZAT6            --------->ZAT14                    <------ZmHOX2a(2)          --------->ZAT14            <---------ZAT14                   --------->ARR11(3)    --------->HSFB2a(1)  <-----------HVH21                           <---------ARR11(3)   ------>MYB46(1) --------->TGA1a                             ------->GAMYB      --------->MYB46(3) --------->O2 --------->ZAT18      ------>ZmHOX2a(2)          <-----------GT1                    <--- <---------O2 --------->ZAT14    --------->ARR11(3)        <---------ICU4 <---------ZAT14    -------- <---------TGA1a   ------>NtERF2 <---------ARR11(3)  ---------->ID1------>MYB83         --------->TOE2(3)   gccatgtgagacagagtactctgccactaagacatgatcttcatcaacgatctttgtctcattgttaccaacgttctacactagacactgcctcaactac  16548700  Previous    Next  AGI:  At2g39690.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69194.1); contains InterPro domain Protein of unknown function DUF547 (InterPro:IPR006869) Range:  from: 16548162    to: 16550416    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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