Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>MYB46(1)                                     ------>MYB83                                     -------->P                      <---------ANAC55(1)                      <---------ANAC58 --------->TOE2(3)                               <---------AHL20(2)                      <---------ANAC55(2)                                           <-------GAMYB                      <---------ANAC58 --------->TOE1(3)                         <---------At4g35610        <---------AHL20(2)          ------>MYB83                               <---------ZAT14        <---------AHL20(1)        --------->MYB46(3)                           --------->ZAT18        --------->AHL20(2)        <---------MYB59                             <---------ANAC46       --------->AHL20(2)<-----------HVH21                  <---------MYB52(1)<---------ANAC58     --------->TOE2(3)--------->ANAC55(2)  --------->HSFB2a(2)                <---------ANAC58   <-------TEIL   <-----------HVH21 ------>MYB46(1)        <----------DOF2<---------ANAC58 ------ZmHOX2a(1)--------->LBD16 --------->ANAC58   --------->ALFIN1      <---------ANAC46 -------TOE2(3)<---------LBD16   --------->ANAC58  <-------MYC3           <---------ANAC58   <------- ----->DOF2  <-----------GT1     --------->ANAC46  ------->MYC3<---------At4g35610 ----------->GT1   aaggatacattaaattttccggttacatgtcccatacccaaccttagagaacatgtgtagcctttagcttaggcttccttgtgtgctgttatattgagta  16540900                                                                              --------->ARR11(3)                                                                              --------->ARR14(2)                                                                           ------>ZmHOX2a(1)                                                                   --------->ARR11(3)             <-----------GT1  --------->ZAT6                <---------REM1(1) <---------ARR11(3)          <---------ICU4    <-----------GT1         <---------TOE2(3)   <-----------GT1    ----------->GT1      <---------REM1(1)      <----------DOF2    <---------GLK1(2)   <---------TOE2(3)  <-----------RAV1(1)   ---------->ID1 <---------TOE2(3) <---------CCA1(2) --ANAC46--------->ICU4  ----------->GT1 --------------->AtSPL8    <---------ARR11(3)   tatatgaggtaatttttgcctcttgtgttgtaacacttgtatttttgttcctttaacatttgatgtagagatttttcctatatcttcagttttgaaaccc  16541000                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                             --------->At4g35610                                                                             <---------ZAT14                                                                             <---------At4g35610         --------->ANAC58                             <---------ARR14(2)     <------NtERF2         --------->ANAC58                             --------->ARR14(2)     --------->ZAT14  --------->ATHB12                                   --------->GLK1(1)    <---------At4g35610 --------->AHL20(2)                       <---------ATHB12                --------->At4g35610 --------->AHL20(1)                       --------->ICU4             <-----------RAV1(1)          <-- <---------AHL20(1)            <---------ATHB12  --------->ZAT6    <----------DOF2               <--- <---------AHL20(2)<---------YAB1     --------->ZAT18<---------GLK1(1)   <---------MYB46(3)  --------   aaatttattgcaagtcaaaatatgaaaattctaatcaatgtgcaatgaataacacaaatccgaattgtgctttgttggctgcagacctgcagttaacaca  16541100                                               --------->ANAC58      <---------AHL20(2)                 --------->DAG2  --------->MYB52(1)     <---------AHL20(2)                 --------->DAG2--------->ANAC58     --------->AHL20(2)        --------->ANAC46--------->ANAC58  <-----------GT1 -------ARR11(3)  <---------ANAC58     ---------->DOF2--------->ANAC58              <------MYB46(1) ------CCA1(2)    <---------ANAC46   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <------MYB83 ->ZAT6           <---------ANAC58--------->TOE2(3)   --------->ANAC46             --------->MYB59   aatcttataaatttgaaatgtcgttcaaactccaaaccacaaaaaggggaagcaaaacgcaaccgtttcacgatttttgtctagtttggtccaatttctc  16541200                                --------->ARR14(2)                 <---------ANAC46                 <---------ANAC55(2)                 <---------ANAC55(1)                 <---------ANAC58                 <---------ANAC58                         <---------ANAC46                 --------->ANAC55(2)                 <---------ANAC46        ----------->GT1         <---------ARR14(2)   <---------ANAC58                <-----------ARR10        <---------ANAC46     <---------TOE1(2)       <---------ANAC58            --------->At4g35610  <---------TOE2(3)--------->ALFIN1             <-----------RAV1(1)            <---------ZAT18 <---------At5g28300       <----------DOF2      --------->ALFIN1               --------->ZAT18   aattacggttttgtgaaatgcgtgtcggtctttggttctgcattcgaactgtgtggcgttttgtgtaacttatccacttagtgagcaaaactactcgact  16541300                                                                                              -------                                                                                           ------->GAMYB                                                                                          --------->MYB46(3)                                                                                          <---------MYB55(2)                                ---------->DOF2                                     <---------bZIP60(1)                           --------->At4g35610                                      --------->bZIP60(1)                         <-----------RAV1(2)                                        <----------ID1                         <------NtERF2                                              <---------ETT(2)                        --------->At4g35610                                      ----------->TGA1                        --------->LBD16                                        --------->YAB1--------        *TSS           --------->RAP2.6(2)                                    <---------YAB1---------   --------->MYB111(1) --------->DEAR3(1)                                     --------->ICU4---------   <---------MYB46(3)  ----------->RAV1(1)                            ------>ZmHOX2a(2)   <---------MYB111(2)   cgtagtagttgcagagaggttttagccgcagaagaaaagggtttactctgtcttcttcagacttctcagtgatcgaagctatgatgacgacaacaaccaa  16541400                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                               <-----                                                                                               ------                                                                                             <-------                                                                                           ------>NtERF2                                                                                          --------->RAP2.3(3)                                                                                          --------->RAP2.3(2)                                                                                          <---------ATERF1(2)                                                                                          --------->RAP2.6(2)                                                                                          --------->DEAR3(1)                                                                                          --------->ANAC46                                                                                          --------->ATERF1(2)                                                                                         --------->ATERF1(1)                                                                                         --------->ERF1                                                                                         --------->RAP2.3(1)                                                                                        --------->At4g35610                                                                                        ------>NtERF2                                                                                        <---------At4g35610                                                                     --------->ANAC46   <---------ATERF1(1)                                                                     --------->ANAC58  --------->DEAR3(1)                                                             <---------ALFIN1        --------->At4g35610                                                           <-----------HVH21         ----------->RAV1(2)                                                           <-----------TGA1          ================                                                           ------>NtERF2            --------->ANAC46<                                                          --------->ANAC46 <---------ALFIN1<---------RAP2.6(3) -->AtMYB61                                               --------->bZIP60(1) <---------DAG2 -------- ->MYB46(3)                                            <---------DEAR3(1) --------->MYB46(3)<------NtERF2 >ANAC58                                           <---------MYB46(3)--------->ANAC58<---------At4g35610 >ANAC58<---------YAB1                            <--------P<------NtERF2-------->P<---------LBD16---   tactatggctatgcttcaaaacctcgtcttctctgttccaatctctcgtatggtagttcggcgtcactccctcgctaccaccttctccgctgccgccaca  16541500                                                   ------->MYC3                                                   <-------MYC3                                                   <-------MYC4                                                   ------->MYC4                                                   ------->PIF5                                                   <-------PIF5                                                  --------->TGA1a                                                  --------->O2                                                  <---------TGA1a                                                <---------ALFIN1      --------->DEAR3(2)                       <---------REM1(2)     --------->SPL7                        --------->ANAC46   <---------SPL7                          --------->ANAC58 ------->DEAR3(1)                          --------->ANAC58 ----->GAMYB                               <--------------OsCBT ----------AtMYB77                        --------->SPL7     <---------TOE1(2) ----ALFIN1                           ------>NtERF2<-------MYC2                                    <- --->MYB46(3)                    --------->DEAR3(2)------->MYC2                                    <- --ALFIN1     ------>ZmHOX2a(1)<---------ARR14(2) <---------O2                                   <--- ====RAV    ----------------->AGL1   <---------ANAC46--------->WRKY38(1)                 <---------At4g35610 -----------HVH21          --------->At4g35610<---------ALFIN1     <---------YAB1   ----------->RAV1(2) --->RAV1(1)<-----------------AGL1 <---------DEAR4(2)--------->ZAT18         <-----------HVH21   ---- ------>MYB46(3)     <---------MYB52(1)<------NtERF2 <---------ZAT18  --------->At4g35610--------->At4g35610   accgtcgtaccgtctcctaaaccggtatcagccaaaccggcgcgtactccacacgtggactcacatgttctcatcggaatgtcagagcctgagcttcaag  16541600                           --------->CCA1(2)                           <------ZmHOX2a(2)                          <---------ARR11(3)                          --------->ARR11(3)                          --------->ARR14(2)                          <---------AGP1                          <---------ARR14(2)                          --------->AGP1                         --------->RVE1(1)        --------->HSFB2a(2)      <---------At4g35610                        ----------->ARR10         <---------HSFC1(1)       --------->At4g35610                   --------->ANAC58               <---------HSFB2a(2)      <---------ZAT2                   <---------ANAC55(2)          <-------TEIL               --------->ZAT2          <-         -------->P--------->ANAC58            --------->ARR14(1)  <---------WOX13(1)   <---------YAB1         ------->TEIL ---------->DOF2          --------->CCA1(2)   <--------P      <---------HSFB2a(1) --------ANAC58  <---------WRKY12             --------->ARR11(1)  <-------GAMYB    --------->HSFC1(2) --------ANAC58 --------->WRKY18(1)           <---------ARR14(2) <------MYB83      --------->HSFB2a(1) ------ARR11(3)<--------ZAP1------>ZmHOX2a(2) --------->ARR14(2) <------MYB46(1)   <---------HSFC1(2) ----->ARR11(3)<-----------HVH21              <---------GLK1(2) --------->MYB59  ---------->DOF2<----   agcttgctatcaacctcggtcaagtaaagatctgatttttgcatataagattcgagaagaaggaatttggttgattaagctgagaaagttctgatttttc  16541700                   <---------At4g35610                   --------->ZAT2             ---------->DOF2      <-------TEIL <---------ZAT2     --------->CCA1(2)    <---------ARR14(2)    --------->ARR14(2)   <------ZmHOX2a(1)      --------->YAB1              --------->DAG2                           <----- -----ZmHOX2a(1)   --------->At4g35610        ----------->GT1    <----------DOF2   <---------GLK1(2) -----LBD16 <------ZmHOX2a(1)      <-----------GT1   ---------->DOF2           <---------At4g35610   aggaaggatacagaggaaagcagctccatcatcttatttacaagagaaaggttaataaagttgaagactttagcaattgtgagcaaattcttatcaagtt  16541800  Previous    Next  AGI:  At2g39660.1    Description:  BIK1 (BOTRYTIS-INDUCED KINASE1); kinase. Identical to Serine/threonine-protein kinase BIK1 (BIK1) [Arabidopsis Thaliana] (GB:O48814); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G55450.1); similar to putative protein kinase APK1A [Trifolium pratense] (GB:BAE71262.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16538766    to: 16541009    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g39670.1    Description:  radical SAM domain-containing protein. similar to radical SAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G19630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69217.1); contains InterPro domain Radical SAM; (InterPro:IPR007197); contains InterPro domain Elongator protein 3/MiaB/NifB (InterPro:IPR006638); contains InterPro domain Conserved hypothetical protein CHP00048 (InterPro:IPR004383) Range:  from: 16541308    to: 16544396    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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