Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <------MYB83        --------->bZIP60(1)                    <------MYB46(1)     ----------->HVH21                        <---------TOE2(3)           <---------ANAC55(2) ------>TOE2(3)                               --------->MYB59             ----------->GT1 ----->ANAC58       --------->ATHB12      --------->ATHB12          --------->ICU4 ----->ANAC58      <---------YAB1        --------->ICU4             <---------YAB1 <-------TEIL -->TEIL<---------bZIP60(1)       <---------ZAT18               <---------ZAT14--------->ICU4 ->WRKY12 --------->At4g35610     --------->ZAT18             <---------------AtSPL8  <--------------   cgtaaatgtgacatctcaattttcattggtgtctagtactctagtgattaggttttcgacatttattgtactgattaagtaaaaattcatggtacaaaca  16538400                                  <---------ANAC46                                 <---------TOE2(3)                                --------->MYB52(1)                              <---------MYB52(2)                      --------->ANAC58             <-               --------->At4g35610<---------ANAC58                    --------->ANAC58     <---------YAB1               <---------At4g35610<---------ANAC58                  ---------->DOF2        --------->ICU4      <---------AHL20(2)      <---------ATHB12                  --------->ANAC58       <-----------HVH21     <---------AHL20(1) --------->ANAC46                        <----------ID1         <-----------TGA1     --------->AHL20(1) --------->ANAC58                        --------->ANAC58      --------->ANAC58   <---------ARR11(3)   --------->ANAC58                      <-----------GT1         --------->ANAC58   --------->ARR11(3) --------->ANAC46                 --------->AHL20(1)             --------->ANAC46   <---------AHL20(1) <---------ALFIN1                 --------->ARR11(3)           --------->MYB52(1) -AtSPL8   <-----------GT1  --------->WOX13(1)         <---------AHL20(1)         <---------MYB52(2)   tcgaatatatatttttctgcttacacacaccaattaacgtggatagaccaattgaaatattttgttacgacaaagcaaaacaaaacaaacgtcatgtttc  16538500                      --------->YAB1                 <---------MYB52(1)                 --------->DOF5.7(2)               <---------------AGL15                     --------->AHL20(2)               --------------->AGL15                   --------->ANAC55(2)              <-----------------AGL3                   --------->ANAC55(1)              ----------------->AGL2                   --------->ANAC46              ==================================================MADS_MADS              ----------------->AGL3                   <---------ANAC55(2)              <-----------------AG                     ----------->GT1              ----------------->AGL1                   --------->ANAC58              <-----------------AGL2            --------------->AGL15           <---------SPL7                       <---------------AGL15          <---------ANAC58                     ----------------->AGL1          <---------ANAC58                     ----------------->AGL2         ---------->ID1                        --------->ANAC58                              <------- <---------MYB52(1)<---------DOF5.7(2)         --------->ANAC58                              -------- ---------DOF2<-----------------AGL1     <-------TEIL  --------->ANAC58  <-----------GT1   <---------HSFB2a(2)   gctgtttgtttgtcgtcccgttaatggtaatctttcagacacatacagtacccaaacaagtaatttgactaaaattttctctctgtctaaatttcagaag  16538600                              ------>ZmHOX2a(2)                            <---------ARR11(3)                            <---------ARR14(3)                            <---------ARR14(2)                            --------->ARR14(2)                            --------->ARR11(3)                                 <---------ARR11(3)                            <---------AGP1                                    <---------CCA1(2)                            --------->ARR14(3)                              <----------DOF2               --------->AHL20(1)                                           <---------DAG2               --------->ARR11(3)                                          --------------------->WRI1               <---------ARR11(3)                                       ------->GAMYB            ========================HOX2a_HOX2a                        <---------MYB55(2)          <---------TOE2(3)--------->RVE1(1) <---------CCA1(2)         --------->MYB46(3)       <----------DOF2  ---------->DOF2  <-----------HVH21           --------->MYB52(1)            <- --At4g35610<------ZmHOX2a(1)<------ZmHOX2a(2)                   --------->GLK1(2)<----------DOF2  <- ->At4g35610=========================HOX2a_HOX2a     <---------YAB1 --------->TOE1(2)    --------->DEAR3(1)   aaaaaaaaactttaggatatattgccaaaagatcttaaaaatgggtcatatcattttgatcatatagaatccaacgacctttatcttttcgccgaactat  16538700                                                                                       ------->PIF5                                                                                       <-------PIF5                                                                                      ===============                                                                                      <---------TGA1a                                                                                      ===============                                   --------->ANAC58                              --------->ANAC58                                   <---------ALFIN1    <------ZmHOX2a(1)         --------->ANAC58                                   --------->ANAC46---------->DOF2             <-----------GT1            <---------MYB52(1)     --------->ANAC58=============================================bZIP_DOF ---------DOF2            <----------DOF2     ----------->GT1        ------>ZmHOX2a(1)--------->TGA1a --------DAG2         <----------DOF2       ---------->DOF2       *TSS       <-----------HVH21  <----   acttttttgtgtccatttgtttgactttctttcacacacacatccacaaagaaaaaaggaccattcttctccttcttctagtcacccctcgtgcctctct  16538800      ------>MYB46(1)      ------>MYB83    <---------MYB46(2)    --------->AtMYB61                             <-----------HVH21    --------->MYB46(3)                       ------>ZmHOX2a(2)    <---------MYB111(1)                     <---------GLK1(1)   --------->ANAC58                         <------ZmHOX2a(2)                                    <---   --------->ANAC58                         --------->GLK1(1)                                 <------   --------->ANAC46                        <---------ARR14(2)                             <---------ANAC46 --------->ZAT6                      ------>ZmHOX2a(1)                           <----------DOF2 <--- ======bZIP_DOF                      ===============HOX2a_HOX2a         <---------ARR11(3)<---------ANAC58 ======bZIP_DOF                      ==============HOX2a_HOX2a       <----------DOF2      <---------ANAC58 ------DOF2              <----------DOF2   --------->ARR14(2)       <---------ICU4     <-----------GT1   ttaacaccaaacccaaaactcccttctctttcttccttcctctccgatctccgttcacatctctctctcatctttatcttcttctttttttgccttgtgg  16538900                                                                  --------->YAB1                                                           --------->At4g35610                                                           <---------ZAT2                                                           --------->ZAT2                                                           <---------At4g35610                                                       --------->ANAC46                             -                                                       --------->ANAC58                             < ------ANAC46                                     <---------At4g35610     <------ZmHOX2a(2)         - ---ANAC46          <----------DOF2               --------->At4g35610--------->MYB52(1)             - ----GAMYB     <-----------GT1     --------->ANAC55(2) --------->ANAC58 ------->GAMYB ---------->DOF2   gttgaaagtttctatattttctctttctcttctgtttacataatccattttcagctcaagcagctgaagaataacgatcaagaaccaaaaaagaagaaaa  16539000                                                     <---------ARR11(3)                                     --------->HSFB2a(2)               ----------->HVH21     <---------HSFB2a(2) -------->ARR14(2)          <---------ANAC58         --------->ARR11(3) ---------ARR14(2)      <---------ANAC58   <---------WRKY38(1)                                <------ -------->GLK1(2)       <---------ANAC58   <---------WRKY45                                   <------ ------>TEIL <----------DOF2<---------ANAC58---------->DOF2      --------->YAB1    --------->MYB46(3)   cgaatctgttcttagctttgatgggttcttgcttcagttctcgagtcaaagcagacatcttccacaatggtaccatctctctccaactatcaattttctt  16539100                                                                          --------->ALFIN1                                                                   <---------WRKY12                                                        <---------YAB1   ------->MYC3                                                      <---------ICU4     <-------MYC3              <-               <---------CCA1(2)                     <---------YAB1<---------WRKY45             -----               <---------At4g35610                   --------->ICU4<---------WRKY38(1)<------MYB83 --        --------->ICU4                  --------->GLK1(1)         --------->WRKY18(1) <------MYB46(1) ---ANAC58    ------->TEIL              <---------GLK1(1)         <<<<<<<<<<WRKY6    --------->MYB59 ---ANAC58 <---------YAB1  <---------AHL20(2)     <---------YAB1  <<<<<<<<<<WRKY11 --------->REM1(2)<   gcaatctggaattatgcatctctctgtttttaattcatggagatttccgattttgattattgtaaatggtcaacatgtgtgtctgtgtaggtaagagcag  16539200                                                         <---------At4g35610                                                         --------->At4g35610                                                       <-----------RAV1(2)                                                    --------->At4g35610                                                    --------->ATERF1(1)                                                    <---------At4g35610                                                    <------NtERF2                                                   <---------ATERF1(1)                                                   ------>NtERF2                                                   <---------MYB46(3)                                                   <---------ERF1                                                   <---------DEAR3(2)                                                   <---------RAP2.3(1)                                                  <---------RAP2.3(2)                                                  <---------RAP2.3(3)                                                  <---------DEAR3(1)                                                  --------->DEAR3(1)                                                  <---------RAP2.6(2)                                                 --------->RAP2.3(1)                                                 <------NtERF2                                                 --------->DEAR4(2)                                                 --------->ATERF1(1)                                                <---------RAP2.3(1)                                                <---------RRTF1(1)                                                <---------ATERF1(1)  ==============================bZIP_DOF       <---------RRTF1(3)  <----------DOF2                              <---------DEAR3(1)        --------->ARR11(3) ------>ZmHOX2a(2)                             <---------RAP2.3(2)       <---------ARR14(2) --------ARR11(3)                          --------->ZAT14    --------->ANAC58 ---->At4g35610              --------->GLK1(1) <---------RAP2.6(2)       <---------ARR11(3)    ------ ------->ARR11(3)            <---------GLK1(1)<---------At4g35610      ----------->ARR10     <<<<<<<< ------ZmHOX2a(2)     <---------TGA1a      <---------ZAT14    --------->ANAC58             <---------   cgatctttatggtctaagtctctcaagtcggaaatcgtcttcgactgtagcggcggctcagaagacggaaggggagatattgagttcgacccctgtcaaa  16539300  Previous    Next  AGI:  At2g39660.1    Description:  BIK1 (BOTRYTIS-INDUCED KINASE1); kinase. Identical to Serine/threonine-protein kinase BIK1 (BIK1) [Arabidopsis Thaliana] (GB:O48814); similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G55450.1); similar to putative protein kinase APK1A [Trifolium pratense] (GB:BAE71262.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 16538766    to: 16541009    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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