Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <---------ATHB12                         --------->WRKY38(1)     --------->ICU4                           --------->WRKY45 --->LBD16                                    --------->WRKY12                               <------- -->TOE2(3)                                  --------->DOF5.7(2)                       --------->ANAC58 -->ANAC58                                   <---------MYB52(1)                        --------->ANAC58 >GAMYB                                     <---------At4g35610                 --------->WRKY45 -->ANAC46 <---------ANAC58                 <-------GAMYB                       ----------->HVH21 -->RAP2.6(2)                              <---------ANAC46                     --------->WRKY12 -->ANAC58 <---------ANAC46     ----------->GT1<---------WRKY18(1)      ----------->RAV1(1)  <------- -At5g28300<---------ANAC58    <---------TOE2(3)       <---------MYB46(3)       --------->WRKY38(1) --GT1  ------->TEIL    <----------DOF2<---------GLK1(1)               ----------->HVH21     --------   aattgcaatgaatgcttgtaaactcactttgcaaaggtaacatttccgttgactaggtggtcactacaagagagcgacagagttgacccgagccagaatc  16517100                                                                       <---------AHL20(2)      <-----                                <---------LBD16                       <---------AHL20(2)       ------                             <----------DOF2                          --------->ARR11(3)       <-----                            xxxxxxxxxxxxxxxx>smallRNA(fl3)            --------->AHL20(2)      -------    ----------->GT1         <----------DOF2                           <---------ARR11(3)      <------ --GLK1(2)                 <---------ANAC46                           <---------AHL20(1)      <------ --ARR14(2)                ----------------->AGL1                     --------->AHL20(1)  ---------->DOF2 ->ARR14(2)              <---------ZAT18    ----------->GT1     ----------->GT1 --------->ALFIN1-----   gcaaacatgttacatttagccatgtagtggcctttgggggataatatggtaattagacaaattgtatcgaaatatatttagagtgttgccatcaaagatc  16517200                                                                       --------->ZAT18                                                                       <---------ZAT18                                                              <---------At4g35610                                                           <-------TEIL<---------ZAT14 ----GLK1(1)                                           --------->AHL20(1) --->GLK1(1)             <---------ARR14(2)            <---------AHL20(2)              --------->ATHB51 -ZmHOX2a(2)             --------->ARR14(2)            <---------AHL20(1)             <---------YAB1 -->ARR11(3)          --------->YAB1                   --------->AHL20(2)           --------->YAB1 ---AGP1           <-----------GT1                     <---------ARR11(3)         <---------DAG2----- ---ARR11(3)      <---------AHL20(2)                   --------->ARR11(3)         <----------DOF2 ->ZmHOX2a(2) <----------DOF2                     <---------YAB1       --------->ZAT14<---------AHL20(2)   tctgtgtttttgaattctttttaatcatatactgaaatttgttttagttgtcatcaatatattcatctactactgtactaatccctttataattgagttt  16517300                                            --------->YAB1                      <-------TEIL                                            <---------ICU4           ------>ZmHOX2a(2)                                           --------->ICU4           --------->At4g35610       -------                                         --------->YAB1             <---------At4g35610    ----------                  --------->CCA1(2)      <---------ICU4            <---------AGP1----------->GT1                 <---------ARR11(3)      --------->ATHB51          --------->ARR14(2)    --------->AHL20(2)           --------->DAG2                <--------HAHB4            <---------ARR14(2)    <---------AHL20(2)          ---------->DOF2    ----------->HVH21<---------YAB1 --------->ATHB12  --------->ARR14(1) --------->MYB52(1)      <-------TEIL   --------->ICU4      <---------YAB1    --------->ARR11(1) ---->AHL20(2)   --------->ARR11(3)  <-------TEIL         <-----------GT1     <---------GLK1(2)    <-   atataacgaagaaaaaggagatatagatgcattgacaagtccataattatgtttagttgtttaccattggatctgaaatagattcgaaaaattaaacggt  16517400                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                               <-----                                                                                        <----------DOF2                                                                                    ------->MYC3 <---                                                                                    <-------MYC3 <---        <---------ARR14(2)                                                          ------->PIF5 ----        --------->ARR14(2) --------->AHL20(2)<---------ZAT6                         <-------PIF5<----    --------->DAG2        --------->AHL20(2) ----------->GT1             <-----------HVH21   <-------   ---------->DOF2      --------->YAB1      <------MYB83        <---------MYB52(1)  ------->MYC2<---- ---->GT1    ----------->GT1    --------->MYB52(1)        <---------DEAR3(2)        <-------MYC2<---- -->MYB.PH3(1)      --------->AHL20(2)      <------MYB46(1)<---------MYB52(1)    <------------OsbHLH66 --------TOE2(3)    <---------AHL20(2)    <--------P    ---------->ID1 <---------MYB52(1)   <--------   taagaaaaaggaaacgcgttaattaaaaataaaaaaacgaagcggtagggttaatttcgtcgtttcgttatccgttgtcgctcgctcgtgcttcatcggc  16517500   *TSS ----NtERF2 ------DEAR3(2) ------RAP2.3(1)         ------>ZmHOX2a(1) ----LBD16     <---------At4g35610       <---------ZAT2 ------MYB46(3)<---------ZAT2            --------->At4g35610 ------ERF1 --------->ZAT14              <---------At4g35610                <---------TOE2(2) -->NtERF2  <---------ZAT14    --------->YAB1                               <---------TOE2(3)     <-- -----RAP2.3(2)--------->At4g35610    ---------->DOF2               <---------YAB1               ---- --DEAR3(1) <---------ZAT18 <---------CCA1(2)                      <---------ARR11(3)            <--- -----DEAR3(1)----------->RAV1(1) --------->MYB52(1)        <----------DOF2 <---------TOE1(2)    <--- -----RAP2.6(2)--------->ZAT2  --------->TOE2(3)      ------>ZmHOX2a(1)<---------YAB1            <--- -At4g35610--------->ALFIN1 ------>ZmHOX2a(1)----------->ARR10     --------->ARR11(3)    <-------TEIL   ggctagtaatccagtgcagcagaggtcctcctatcttaacgaaagctgtgattctccttcgtctttcaatatcattcttaggtttttgaaattcatgtgt  16517600                              <---------LBD16                             --------->MYB52(1)                           <---------MYB55(2)                           <---------ATHB12                          ------>MYB46(1)                          ------>MYB83                      ------>NtERF2                  --------->TGA2(1)                  <---------TGA2(1)                  <---------bZIP60(1)                   ---------->DOF2                  --------->bZIP60(1)                --------->LBD16                  ------>NtERF2          <------ZmHOX2a(1)--------->MYB46(3)       <---------HSFB2a(2)              --------->DEAR3(1)      --------->TOE1(2)  --------->WOX13(1)         --------->HSFB2a(2)            ------>NtERF2 -------SPL7      --------->ANAC46                 <---------LBD16                ----------->HVH21 ------->GT1     ----------->STF1           ----------->RAV1(2)                   --------->DEAR3(1) ------ANAC46  ----------->TGA1<---------LBD16------>ZmHOX2a(1)                --------->TOE2(2) ------ANAC58--------->At4g35610 --------->LBD16  --------->MYB52(1)         ------->TEIL ------ANAC58<---------At4g35610--------->LBD16<-----------HVH21             -------->P   cgtaagaaccgaggaagatgacgacaccaatcaccgggaaaaactctcctgttaccggaaaagaagaaggcgaactatctacctccgacgacgaagtatc  16517700                                                             <-------GAMYB                                                            <-----------RAV1(1)                                                         --------->GLK1(2)                                                        <---------ARR14(2)                                                        <---------GLK1(2)                                                  <---------ARR14(2)                                                  <---------ARR11(1)                                                  --------->ARR14(2)                                <                                                  --------->GLK1(2)                                 <                                                  ------->TEIL   <---------ALFIN1      ------>ZmHOX2a(2)                  <------------------------ANAC81<---------ARR14(1)                   --------->GLK1(1)         --------->YAB1                          <---------CCA1(2)               --------->At4g35610<   --------->ANAC46                   <-----------GT1   --------->ARR14(2)       <---------At4g35610<   aattctcgctactataacttatattttctgctattgattttcacagtctgcgaatctggattctgttgcaccctgaacatatcaactgatctctctcgat  16517800               ------>ZmHOX2a(2)              <------ZmHOX2a(2)              --------->CCA1(2)              --------->At4g35610              <---------At4g35610             <---------ARR14(2)             --------->AGP1             --------->ARR14(2)             <---------ARR11(3)             --------->ARR14(3)             --------->ARR11(3)            <---------GLK1(1)  <---------AtMYB61                                            <---------ZAT6    <---------ARR11(3) ---------ANAC46                                    ----------->GT1   <---------ZAT14 ---------ANAC58                                    <---------ANAC46  --------->ZAT14              <- ---------ANAC58                               --------->CCA1(2)   --------->MYB52(2)             <-- -----------RAV1(1)                           --------->ARR11(1) <---------MYB52(1)             -----   ttgtgtggtttttgagatctgcctgtgttcaatttgtatgggtttatagatttggggtataaattgtgttagttcagagactagagcttatttcttagtg  16517900                                                  --------->ANAC58                                                 --------->GLK1(1)                                                 --------->WOX13(1)                                               <------NtERF2                  --------->ATHB12                                            <---------LBD16                   --------->ATHB51                                        --------->ATHB12                     <---------YAB1                                        <---------ICU4                     <---------ICU4         <---------YAB1                --------->ICU4                      --------->YAB1     <---------MYB52(1)        <-----------RAV1(1)--------->ANAC58        <---------YAB1    <-------GAMYB            <---------ANAC46 --------->LBD16          <---------AHL20(2)   --------->MYB52(2)        <---------ANAC58<---------RAP2.6(2)       --------->AHL20(2)   <---------MYB46(3)        <---------ANAC58<---------ANAC46 <---------HSFB2a(2) --------MYB46(3)         <----------DOF2   --------->RAP2.6(3)  <---------GLK1(2)          --------- -------WOX13(1)     ---------->DOF2   --------->AHL20(2)     --------->HSFB2a(2)          <---------ARR14(2) ---->ATHB12  <---------AHL20(2)       <---------AHL20(2)     --------->HSFC1(1)  --------->ATHB12   attgttcgttgattatttgatttcaaagctttcgtgttgcattaattgcggcaatccactgtttccagaatgttttattattattgattagcagatttca  16518000  Previous    Next  AGI:  At2g39570.1    Description:  ACT domain-containing protein. similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69235.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 16514974    to: 16517276    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g39580.1    Description:  binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO69241.1); contains domain TPR-like (SSF48452) Range:  from: 16517503    to: 16524151    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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