Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------AHL20(2)                                                                                --------->AHL20(2)                                                                             <---------GLK1(2)                                                         <---------ZAT18     <---------ARR11(3)                                               --------->AHL20(2)       <---------ALFIN1 ------->ANAC46                               --------->AHL20(2)        --------->AtMYB61 ------->ANAC58                            <---------AHL20(2)           ----------->RAV1(1) ------->ANAC58                            --------->AHL20(2)          --------->MYB46(3) ----->ANAC46                             --------->AHL20(2)           --------->ANAC46 ------GT1     <---------At4g35610        <---------ATHB12           --------->ANAC46       <--------   cacaccacaaaatatacagcaaacttcaactaaaacacaatctaataaataaaaaatagaacacttagttcccaccacagattttattacaaaaaaaaca  16514600                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(3)                                                                            --------->ARR11(3)                                                                            <---------AGP1                                                                            <---------ARR14(3)                                                                            <---------ARR11(3)                                                                            <---------ARR14(2)            --------->LBD16                                                 --------->ARR14(2)           --------->ANAC55(2)                                    <---------ALFIN1    <---------ICU4                                              ----------->RAV1(1)    <--------HAHB4                                             --------->RAP2.3(3)               ----    --------->YAB1     <---------ANAC58        --------->ATHB12<---------ZAT18       <-----------GT1   <---------YAB1      <---------ANAC46   --------->ICU4       --------->ZAT18------>ZmHOX2a(2)  ---- --------->YAB1  <---------AHL20(2)       <---------YAB1     --------->PCF2--------->RVE1(1)  <------ --ID1<---------YAB1   <---------ANAC58<---------YAB1   <-----------GT1 ---------->DOF2       -------   aaattatcattatccgtattttatatcgtgcatcacaatttgtgattattcattgtattaacgagcccacacataaaagatcttaattatccatctacac  16514700        --------->ANAC46                                                                          <--       <---------LBD16                                                  ---------->DOF2           <--   <---------ARR11(3)                                             <---------At4g35610             <--   --------->ARR11(3)                                             --------->ZAT2                  <--   <-----------ARR10                                              --------->At4g35610             <-- ----->TOE1(3)                                  --------->ARR11(3)<---------ZAT2             -------- ----->TOE2(3)                      <---------ZAT18             <-----------RAV1(2)          <------- ---ALFIN1           --------->TOE2(3)    ----------->GT1     --------->ANAC46       <-------TEIL --- -->REM1(1) --------->DEAR3(2)<---------At4g35610     --------->At5g28300    --------->CCA1(2)   <---   cttaaaatctacggaccgtcttacattaatacagctagttcaccttgtgaaatctcggtaataccctcagctgcaaaagatagaagtttcatagaacggt  16514800                                                                  --------->ANAC46                                                                <---------ALFIN1                                                             --------->PCF2                                                             <---------TCP15(1)             ------>MYB46(1)                                <---------PCF2             ==================================MYC_MYB     <------MYB46(1)             >>>>>>>>>MYB98          --------->O2      --------->TGA1a             -------->P              ==========================================MYC_MYB             ------>MYB83            <---------ANAC55(1)   <------MYB83                 --------->YAB1            ------>MYB83             <---------ANAC58  <---------O2   --------->At4g35610            ------>MYB46(1)          <---------TGA1a   --------->O2 ---------->CDC5    <---------ATHB51          --------->MYB46(3)         <---------ANAC58  <---------TGA1a<---------At4g35610          <---------MYB59            <---------ANAC46  --------->ANAC58            ------------>CBF    <---------ICU4    --------->AHL20(2)               --------->ANAC55(2)         ------->GAMYB -------ANAC58      <----------DOF2  <---------ANAC55(2)  --------->MYB59        --------->ANAC58 -------ANAC55(1)   ===========================bZIP_DOF<---------ANAC55(2)       --------->ANAC58 -------ANAC55(2)   =============================================bZIP_DOF      --------->MYB46(3) -------ANAC58    --------->ZAT2     <---------O2      --------->ANAC46     --------->ANAC46 -------ANAC46 ------->GAMYB         --------->ANAC55(2)  <---------TOE1(2) --------->ANAC58 ------->AtSPL3================================MYC_MYB --------->ANAC58     --------->ANAC58 --------AtSPL3==================================================MYC_MYB  <---------ALFIN1 ------>ANAC55(2) <---------ZAT2     --------->TGA1a   ====================================MYC_MYB--- ----TEIL--------->ANAC46   <-----------GT1            ========================MYC_MYB <---------ATHB12   acgtgttcattacccaacccagctttaaattttcttcttacgtgtgtatgactagacacgtaggtcccactcagcaccacgacaacccaataataaacat  16514900                               <----------DOF2                            <-----------GT1                                 <---------RVE1(1)                        <---------AHL20(2)                                  <---------CCA1(1)                       <---------AHL20(2)                                  <---------ARR11(3)                       --------->AHL20(2)                                  <---------GLK1(2)   <-----                    <---------AHL20(2)                                     --------->ARR11(3)  <-----                   --------->AHL20(2)                                     *TSS                -------                   <---------AHL20(2)                                   --------->LBD16      <-------                   <---------AHL20(1)                                  --------->LBD16      <------MYB46(1)               --------->AHL20(1)                   <---------MYB52(1) --------->ANAC46     <------MYB83               --------->AHL20(2)            --------->AHL20(2)      <---------LBD16       --------->MYB59               <---------AHL20(2)            <---------AHL20(2)<---------DAG2            <---------MYB52(1)       ---------->DOF2 <---------AHL20(1)--------->AHL20(2)    <----------DOF2   <-----------GT1 <--- -------->TBP --------->AHL20(2)         <-----------TBP <<<<<<<<<TBF1--------->LBD16------>ZmHOX2a(1)   ataaaaacaaaaagaaattaattaattttttttctttcttcatatatataattcgtttcttcttcctttttccccgagatttttttcctctgttcggtcg  16515000                                                                                                   --                                                                                                  ---                                                           <------NtERF2                          ---                                                          ------>NtERF2                         <----                                                         --------->DEAR3(1)                   =======                                                         <---------DEAR3(1)                   ------>ZmHOX2a(2)                                                         --------->ANAC46                    ========                                                        --------->ATERF1(1)                  <------ZmHOX2a(2)                                                       <---------ATERF1(1)                  ---------                                                       ------>NtERF2                    --------->LBD16                                                      --------->DEAR3(1)              <---------LBD16                                                      <---------DEAR3(1)          --------->ARR11(3)                                                    ------->GAMYB                 <---------ARR11(3) ----DEAR3(1)                                      --------->MYB46(3)       --------->LBD16 <-------- ----ETT(2)                                <---------ARR14(2)               ----------->GT1 <-------- -->SPL7          --------->ATHB12         --------->ARR14(2)              ----------->GT1  --------- ----HVH21       <-------TEIL              <---------GLK1(1)               --------->LBD16 <---------GLK1(1) ---NtERF2<---------MYB46(3)               --------->GLK1(1)              <---------LBD16  --------->GLK1(1)   gccattgaattgttgttgattcattggctctaaaacgaaaatgggaattctcaacgacgacgccgttttaatcgaaccgggaaaaatctccggagatccc  16515100         <-----------HVH21      <---------DOF5.7(2)      <---------At5g28300    --------->DOF5.7(2)  <---------MYB46(3) ------->DEAR3(1) ------>MYB46(3) ------>DEAR3(2)          <---------ARR14(2)                                                        < -----ALFIN1              ------->TEIL                               <------MYB83                 --- ==========================HOX2a_HOX2a                       ------>ZmHOX2a(1)    ----------------->AGL1 ==========================HOX2a_HOX2a                  --------->YAB1            <-----------------AGL1 >ARR11(3)                --------->ARR14(2)     --------->REM1(2)   <------MYB46(1)      ----------- -ARR11(3)          --------->ICU4               --------->ZAT14    --------->MYB59       --------->At4g35610 -ARR14(2)          ------>ZmHOX2a(1)            <---------ZAT14 --------->ARR14(2)    <---------ZAT2 >ARR14(2)<---------MYB52(1)                  <---------ANAC46   <---------ARR14(2)    --------->ZAT2   accgtcgttaccgtcaattgtcctgatgaatccggtctcggttcaactctgtgtagaatcatcctcgaatttggtctctccattacccgagcaggtcaat  16515200                              --------->KAN4(2)                              --------->ARR14(2)                             --------->KAN4(1)               --------->KAN4(2)                             --------->HSFB2a(1)            --------->HSFB2a(1)                             <----------TaMYB80             <---------HSFB2a(1)                             <---------KAN4(1)              <----------TaMYB80                             <---------HSFB2a(1)            --------->KAN4(1)                 <---------------AGL15                 --------->ANAC58                 --------------->AGL15                 --------->ANAC58                <-----------------AGL2                 <---------ANAC55(2)              <---------ARR11(1)                       --------->ANAC46              --------->ARR14(2)                       --------->ANAC55(1)              <---------ARR14(2)           <---------ANAC46 <---------KAN4(1)              ------->TEIL  <---------KAN4(2)          --------->ANAC55(2)             <---------ARR14(1)           ---------->ID1   <---------KAN4(2)             <---------CCA1(2)<---------ARR14(2)      <---------LBD16    --------->ATHB12 ---------AHL20(2)          ---------->TaMYB80       --------->MYB52(1) <---------YAB1 -------------------->TaNAC69(2)      <---------MYB52(1)   ---------->TaMYB80----------->GT1 >GT1 <-----------GT1       ----------->ARR10      <----------DOF2  <----------DOF2   attcaattttacttcgtatctgtttaggggaatattctctgtttgtcgtttagcttcacggaatattcttctttatgattcgaaaaattcaattctgttt  16515300                     <---------YAB1                    <---------AHL20(1)                --------->MYB46(3)                --------->AHL20(2)           --------->ARR11(3)                                 <----                <---------AHL20(2)           <---------GLK1(2)                                  -----               --------->ICU4                <---------ARR11(3)                                 <----           --------->At5g28300       <---------MYB46(3)                       <---------ZAT6    -----          ----------->GT1     --------->ICU4 --------->ARR14(2)     <---------ZAT6              <----        <---------ANAC46 ----------->GT1     <---------ARR14(2)     ----------->GT1           -------   ttcttattttgagggtaattaatatgtttgtaaaaatggtgtttgcagatttttcaacagatggaagatggtgttatatagtgttttgggttactccaga  16515400  --------->At4g35610 -----ARR14(2)                     --------->GLK1(2) ---->ARR11(3)                ---------->DOF2                  <---------ANAC58 -----ARR11(3)            --------->At4g35610                  <---------ANAC58 ---->ARR14(2)    <---------WOX13(1)     <----------DOF2 ------>ZmHOX2a(1) -------ARR10   --------->ATHB12  <---------GLK1(2)   ---------->ID1    <----------DOF2 -->LBD16------>ZmHOX2a(1)<---------At4g35610<-----------GT1   <---------ANAC46            >>>>>>>>>>   tattagctctcctaaaattgattgggacagcttaaagaatcgtcttttatcagcttgtccttcttgcttaggctctttctacttctgccttcaatccaat  16515500  Previous    Next  AGI:  At2g39570.1    Description:  ACT domain-containing protein. similar to ACT domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G36840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69235.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 16514974    to: 16517276    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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