Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ZAT6               ----------->GT1             --------->ZAT14             <---------ZAT14         <-----------GT1                                           <---------AHL20(1)        <---------YAB1               <---------ARR11(3)          --------->AHL20(1)             -----      <---------ICU4           <-----------GT1                   <---------AHL20(1)             -----    <---------ANAC46    <----------DOF2                       --------->YAB1        <---------TOE2(3)    <---------ANAC58 <---------ARR11(3)                       --------->AHL20(2)    <---------TOE1(3)    <---------ANAC58 --------->ARR11(3)            <----------DOF2 --------->AHL20(1) <------ZmHOX2a(1)   cttcttgcttattactacagttaaatctttttttttcaacatctaatgctatacttttaatctataatatatattagatgtgacttaaggaatttcaata  16507500             <---------AHL20(2)                          <---------ICU4         --------->YAB1                                 <---------YAB1        <---------YAB1                                --------->YAB1        --------->ICU4                                <---------ICU4           <---------ARR11(3)      --------->YAB1                                 --------->ICU4            --------->ARR11(3)   --------->YAB1                                  <---------ICU4             --------->CCA1(1)   --------->ANAC46 ------->TEIL                   --------->YAB1    --------->GLK1(1)   --------->ANAC55(2)                     --------->ALFIN1  --------->YAB1   --------->RVE1(1) ------>GT1 --------->AHL20(2)    <-----------GT1 --------->ICU4     <---------GLK1(1) ---->YAB1  --------->YAB1     <---------ZAT6   --------->YAB1     <------ZmHOX2a(1)               <-   gttatacataataataaaaatgaatatttgttagtgttacaaactgtgtgtcataatcatcattcatcaggatttcaaaaatatctcaaaattgttgtaa  16507600                                   <---------AHL20(1)                                   <---------AHL20(2)                                   --------->AHL20(1)                                   --------->AHL20(2)                            --------->YAB1                     <---------ZAT18           <---------AHL20(2)                                 <--                     <---------ZAT14           --------->AHL20(2)                               -----                     --------->ZAT14          --------->AHL20(2)                               <-----  --------->ANAC55(2)--------->ZAT18    <-----------GT1           ----------->GT1            <------- ------TEIL      ------->TEIL     --------->AHL20(2)      ------------>CBF         ------------>CBF   gttcatgtaattcgaaatgaatgtgcactataagaaataaatttacaatttaaaaaatgcttcaatactggttacaaaaaaaactttcaatactagtatt  16507700                                                                                            <--------                                                                                            ---------                                                                                           <---------GLK1(1)                                                                                           --------->GLK1(1)                                                                                           <---------RVE1(1)                                                                          <---------DDF1   --------->RVE1(1)                                                                   <---------------AtSPL8  --------->CCA1(1)                                                                   <---------------AtSPL3  <---------CCA1(1)                                                             <---------------AGL15    ---------->DOF2                                                             --------------->AGL15 --------->ANAC58 ---------GT1               ------->TEIL            <---------AHL20(1)    ----------->RAV1(1)  <----- ---->YAB1               <---------YAB1     ------->TEIL    <-----------------AGL3 --------->ANAC58 ----YAB1         --------->DAG2      <-----------GT1     <-----------GT1<---------ETT(1) <---------ARR11(3) --ZAT6          ---------->DOF2----------->GT1     --------->AHL20(1)  --------->DEAR3(2)--------->ARR11(3)   atactacttacttagtcaaaaaagtttatgaatatggttttttctgtatgttaatatttttaactgaaaatagtaccgacataacaagtaaagatatctt  16507800                                                                                                    <                                                                                                    -                                                                                                  ---         --------->MYB46(3)                                                                    <-----         <---------MYB52(2)                                                                    <-----    ----------->GT1                                                                            <-----   <---------TOE2(3)                                   <----------DOF2                         ------  ---------->DOF2                                  ------>ZmHOX2a(1)        --------->ZAT6     ------ <---------AHL20(2)                          <------ZmHOX2a(1)              <---------ICU4    <------ -ARR11(3)                    <---------GLK1(2)<---------GLK1(1)         --------->AtMYB61    ------- >ARR11(3)      --------->AHL20(2)         <---------TOE2(3)          <-----------GT1         <------ -----DOF2    --------->TOE2(3)            <---------TOE1(3)   ----------->RAV1(1)<----------DOF2 <--   tatttaaagtaacaaacattaatttcacttcaaattctcactattaaggattcctctctttgtagccacatttcaccatcactactttgttttcgcatat  16507900 ---------AHL20(2) -------->AHL20(2) ------>TOE2(3) ----ARR11(3) ----ARR11(1)                                        --------------->AtSPL8 ----ARR14(2)                <---------HSFB2a(2)     <---------------AtSPL8 --->ARR14(2)                --------->HSFB2a(2)    <-------GAMYB --->ARR11(3)                <---------HSFC1(1)    <---------MYB46(3) ---GLK1(1)              <----------DOF2         ------->PIF5                                     --- -->GLK1(1)  --------->ANAC46--------->HSFC1(1)  <-------PIF5        <---------ICU4               --- ---CCA1(2)  <---------ANAC55(2)            ------->TEIL             <---------GLK1(2)<---------CCA1(2) --------DOF2--------->ANAC55(2)         <---------REM1(1)        --------->YAB1   ------>ZmHOX2a(1)   ctttaaattttgtatacgtagcaaactctttcgagaaaacaagatgaagctcgtggttgtacaattcttcataatctctcttctcctcacatcttcattt  16508000                                                            --------->AtLEC2                                                -------->HAHB4                                                <---------ICU4                                                <--------ATHB1                                                --------->YAB1                                                --------->ATHB51                                               <---------AHL20(2)                                               <---------ATHB51                   <---------ANAC58            <---------YAB1  ------->TEIL                   <---------ANAC58            --------->ICU4 <---------AtLEC2    <----------DOF2<---------ANAC46      ----------->GT1 --------->WRKY18(1)                        -  ------->TEIL<---------YAB1      --------------->AGL15 <-----------HVH21                           < ------------>AtSPL3              <---------------AGL15<------MYB46(1)                            <-- ------------>AtSPL8             --------->ANAC55(2)   <------MYB83------->TEIL              --------   tctgtactttcaagtgctgattcgtgtaagtgtttacttaatctagttaataattgtaggtcatgcatgtatcattttgaaacaagttttctgaaattct  16508100                                                 --------->ZAT18            ----------->RAV1(1)                                                 --------->ZAT14         <------ZmHOX2a(1)    <-----------GT1                      --------->ALFIN1               --------->ANAC58 -------->ARR11(3)                     <---------ANAC46   <---------At4g35610 ---------ARR11(3)            --------->At4g35610<---------ZAT14        --------->ANAC58 -------TOE2(3)         --------->AHL20(2)  ---------->DOF2      ---------->DOF2 ->GLK1(2)         <---------YAB1     <---------DEAR3(1)  --------->At4g35610   aagattttacatatatatgtgataaatgaattagcagcatgcggtggaaagtgcaatgtgagatgctcaaaggcaggacaacatgaagaatgcctcaagt  16508200              --------->HSFB2a(2)                                              --------->CCA1(2)    -              <---------HSFB2a(2)          <----------DOF2                 --------->LBD16          <             ----------------->AGL1  <---------HSFB2a(2)           ------>ZmHOX2a(1)              <--        <-----------RAV1(1)          --------->HSFB2a(2)     ------->TEIL <---------ANAC58       ----     <---------AHL20(1)             <---------LBD16       <---------YAB1  <---------ANAC58    -------     <---------ARR11(3)            <---------LBD16   ---------->DOF2    <---------At5g28300 ---------   actgcaatatatgttgccagaagtgtaattgtgttccttcgggaacttttggacacaaagatgaatgtccttgctaccgtgatatgaaaaactccaaagg  16508300                                  <---------ICU4                                 ------>ZmHOX2a(1)                             --------->ARR14(3)                             --------->ARR11(3)                             <---------ARR14(3)            ==========================HOX2a_HOX2a  ------>ZmHOX2a(2)          <---------GLK1(2)  =================HOX2a_HOX2a ------>ZmHOX2a(2) <------ZmHOX2a(2)           <---------ARR11(3)                                   <-----------GT1 ==================HOX2a_HOX2a<------ZmHOX2a(2)                                   --------->YAB1 -------->ARR14(2)         ----------->ARR10                                   --------->WOX13(1) ---------ARR14(2)    <----------DOF2                                     --------->ICU4 -------MYB46(3) --------->HSFB2a(1)      <-------TEIL                ----------->GT1 ----->ALFIN1   ------->TEIL --------->ARR14(2)                    --------->ALFIN1        <---------YAB1 -->DAG2    ------>ZmHOX2a(1)<---------ARR14(2)         --------->ANAC55(2) --------->TOE2(3) ->DOF2     =========================HOX2a_HOX2a       --------------->AtSPL8  --------->YAB1       -   tggatccaagtgtccttgaacgttctttgaagatcctcatcacatacatataacttctacgtactatatgtgtggaaatattaatcacattctatgtttg  16508400  Previous    Next  AGI:  At2g39540.1    Description:  gibberellin-regulated family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G10588.2); similar to snakin-1 [Solanum tuberosum] (GB:CAC44032.1); contains InterPro domain Gibberellin regulated protein (InterPro:IPR003854) Range:  from: 16507944    to: 16508319    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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