Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------TOE2(3)                         --------->LBD16                                ---------->DOF2                         <---------At5g28300                        <---------TOE2(3)                              <-----------GT1                     --------->AHL20(2)                           --------->TOE2(3)                     <---------AHL20(2)        ------>ZmHOX2a(1)  --------->TOE1(3)                <---------YAB1 <---------AHL20(2)          <---------AHL20(2)              --------->YAB1   --------->AHL20(2)   --------->YAB1<---------DAG2             <-------            <---------ANAC46------->TEIL      --------->TOE2(3)<-----------GT1               --------  <-----------GT1   --------->YAB1  <---------ARR11(3)     --------->AHL20(2)                --------   caatatacagtatgacttataattttaatgtatttaaagatagtatttcctcaaaaatgatataaataccttatcaccgtagaaatcgaactgataagta  16506100                                                                                  --------->SPL7                                                                                 ------>NtERF2                                                                                ----------->HVH21                                                                              <------NtERF2                                                                              --------->At4g35610                                                                              <---------At4g35610                                                                            <---------DEAR3(1)                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                          ------>NtERF2                                                                         --------->ATERF1(2)                                                                         <---------bZIP60(1)                                                                         --------->bZIP60(1)                                                                         <---------ATERF1(2)                                                                         <---------RAP2.6(2)                                                                      --------->WRKY12                                                                      ----------->HVH21           <--                 ------>NtERF2                                        ----------->TGA1     --------->ARR11(3) <------ZmHOX2a(1)<------NtERF2                                     --------->At4g35610    --------->ARR14(2) --ANAC55(2)   <---------MYB52(1)                      <---------ANAC46 --------->RAP2.6(3)------->TEIL ->ANAC58     --------->LBD16                        ------->GAMYB <---------TOE1(1)       <---------ARR14(2) ->ANAC58   <---------LBD16     ----------->GT1   --------->MYB52(1)<---------At4g35610   <---------CCA1(2)   agaggatgtgtttttccggtggcaaattgggagattgttaagaacagttgtacaacggcgtaaactagtccgatgacggcagcggacagcatgtatcttc  16506200                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(1)                                                                                         <---------AHL20(1)                                                                                      --------->AHL20(1)        ------->TEIL            <---------ANAC55(2)                                   --------->AHL20(2)     <---------YAB1             ----------->GT1                                       <---------AHL20(2)   --------->YAB1              --------->MYB59                                       <---------AHL20(2)  --------->ICU4  --------->ARR14(2)                                                 --------->AHL20(2) -------YAB1      <---------ARR14(2)                       --------->CCA1(2)   ----------->GT1<------   atgaatgatgaatccaaacatatatgcaaaaaataggtaaaaatagttagtcaaatattggatacaaaattttcacagagaaggtaaataatttatttac  16506300                                                                    <---------At4g35610                                                                 <------MYB46(1)                                                                 <------MYB83                                                                <---------AtMYB61                                                               <--------P                                                             --------->ALFIN1   <---------ALFIN1                                   <---------ANAC58          <-----------RAV1(1)--------->AtMYB61                               <---------WOX13(1)         <---------DEAR3(1)   --------->MYB46(3)<---                            <---------YAB1        --------->HSFB2a(2) --------->ICU4 <---------MYB52(1)                     --------->ANAC58  <---------ANAC58 --------->MYB52(1)     <---------ABI4(2)----- --------->YAB1      --------->ANAC58  <---------ANAC58----------->TGA1<---------At4g35610  <------ZmHOX2a(1) -----GT1         ---------->DOF2  <---------ANAC58    ----------->HVH21     <------ZmHOX2a(1) <-----   ctataagcatagacatcgttgaaaggcaatttgatagacgtgcttgaaatttcgagagtgacggtgttggtgctgatgaggaccaccgttatgaggagga  16506400                                                             --------->ALFIN1                                                             <---------DEAR3(1)                                                          <---------ANAC46                                                         --------->ATERF1(1)                                                       <---------PCF2                                                       --------->TCP20                                                       --------->TCP16(1)                                                      --------->ATERF1(1)                                                     <---------MYB46(3)                                                     <---------ATERF1(1)                                                    <---------DEAR3(1)                                                    --------->ALFIN1                                                    <---------AtMYB61                                                 <---------DEAR3(1)       <---------WRKY38(1)                      <---------ORA47(1) --------->ALFIN1      --------->WRKY18(1)                       --------->SPL7<---------ZAT2     <--------ZAP1                             --------->MYB52(1)<---------MYB46(3)     <-----------HVH21                        ----------->HVH21 --------->ALFIN1     --------->At5g28300                      ------->GAMYB--------->LBD16   <------NtERF2                              <---------SPL7<------NtERF2  --------->At4g35610                        --------->MYB46(3) <---------AtMYB61             <------  ------>NtERF2                         --------->ANAC58 <------NtERF2                        -------  --------->LBD16                       --------->ANAC58 <---------LBD16        --------->ARR11(3) --------->DEAR3(1)                     --------->ANAC46------>NtERF2        --------->AHL20(2)     < ------GLK1(1)             --------->ZAT18   <---------MYB52(2) <---------DEAR3(1)       <---------MYB52(1) ----->DOF2              <------ZmHOX2a(1) --------->MYB52(1)<---------AtMYB61  <---------ARR11(3)--- -ZmHOX2a(1)       <------ZmHOX2a(1)------>ZmHOX2a(1)--------->ABI4(2)       <---------AHL20(2)   <--   aagccgcggtcaaaaccctaaggagaaggagcactgtcctcaacgtaacggacggtggtgccggaggtggtggagccatataaatcttcccgttaattaa  16506500         ---------->DOF2      --------------->AGL15     <---------TOE2(3)      <---------------AGL15--------->ATHB12                                                  --------      <----------DOF2      -------->HAHB4            --------->ANAC58                        -------- ---AHL20(2)              --------->ICU4             --------->ANAC58                        -------- -->AHL20(2)              <---------YAB1<---------ARR11(3)                <---------AHL20(2)--------- ---------MYB52(1)<---------At4g35610   --------->ARR11(3)        --------->WRKY38(1)     <---------ANAC46 ------>YAB1      --------->At4g35610 ----------->ARR10        --------->ICU4            <---------TOE2(3) -------ICU4 ----------->GT1    <---------TOE1(3)*TSS--------->ANAC46    <-----------TBP<-----------GT1   tcgttacgctttaaagagtaagatgaaaatgattaaggctaagatgttcgaatgcaagacatggaatgttgactaatttatagccaaaatttacgttgac  16506600                                        --------->YAB1                                        --------->TOE1(3)                                        --------->TOE2(3)                                --------->ICU4                               <---------AHL20(1)                                                 ---                               <---------AHL20(2)                                                 <--                              --------->YAB1                                                     <---                             <---------YAB1             <---------AHL20(2)                   <-------                            <---------AHL20(2)        --------->AHL20(2)                     <------- ->WRKY12                   --------->AHL20(2)       --------->AHL20(1)                     <-------- ->WRKY38(1)                --------->AHL20(1)       <---------AHL20(1)                     --------- ->WRKY45                  --------->YAB1    ----------->GT1                       <---------ANAC58 >DOF5.7(2)           <-----------GT1<-----------GT1--------->AHL20(2)             <---------ANAC58   tcgagttcgaagagttgatttttgttacattataatatttaaccataatgtaaaatatatatatgcacaaattgtattcttcaattcgtgctggagcttg  16506700                                                      --------->AHL20(1)                                                      <---------AHL20(2) ------>HSFB2a(2)                                     --------->AHL20(2) -------HSFB2a(2)                                     <---------AHL20(1)     <---------TOE2(3) ------ANAC46                                    --------->ARR11(3)     --------->AHL20(2) --ANAC58                                        <---------ARR11(3)     <---------AHL20(2) --ANAC58                                        --------->AHL20(1)    --------->AHL20(2) -At4g35610 <---------ALFIN1                     <---------AHL20(1)    <---------AHL20(2)           - >ZAT2  <------ZmHOX2a(2)                  ----------->GT1        ----------->GT1                   -   ctggaactcgatcaccacttctaagttctaacttagtaattgaagtcgtgatatattttattgacatatggtattaatttagatttaaaacagtttttag  16506800                                                            <---------AHL20(2)                                                            <---------YAB1                                                           <---------AHL20(2)                                                         <---------YAB1--------->ARR11(3)                                                      <---------AHL20(2)                                                      <---------YAB1   <---------ARR11(3)           -                                                  --------->YAB1      <---------CCA1(2)            <-                                              --------->TOE2(3)  <-----------GT1               <----- -------->ANAC58    --------->YAB1      --------->ANAC58<---------AHL20(1)                     <----- -------->ANAC58   <-------TEIL         --------->ANAC58<---------AHL20(2)<----------DOF2  ----------   ccaaggaattgtaagtctaaattcatagtcttcgtagccagaaggcaacctttgatattatttttattatctatatctttttttttttttggacaaagct  16506900                                                                                                   <-                                                                                                 ----                                                                                            <--------                                                                                            -------->HAHB4                                                                        <----------DOF2    --------->ICU4     --------->REM1(1)                                            <-----------GT1        <--------HAHB4 ------>TEIL                                  <---------YAB1<---------YAB1               <---------ICU4 --------CCA1(2)                           <---------YAB1--------->GLK1(2)              --------->ICU4 ----ANAC58                                <---------AHL20(2)  <---------YAB1           <---------YAB1 ----ANAC58         ---------->DOF2   ---------->ID1    <---------GLK1(2)             --------->YAB1 >DOF2    --------->MYB52(1)      <----------DOF2   XXXXXXXXXXXXXXXXXXXX>MIR868      <---------ATHB12   tgtatctacatctaactgagaaaaaagaatgtttttctttgtcatattattgttctcaaattctgattatacaacttttgacatcaaatcataattatgc  16507000  Previous    Next  AGI:  At2g39530.1    Description:  integral membrane protein, putative. Identical to UPF0497 membrane protein At2g39530 [Arabidopsis Thaliana] (GB:Q8GWD5;GB:O80640); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39518.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64094.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 16505564    to: 16506549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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