Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  >>>>>>>>>TBF1                                                    <-------MYC3       <---------LBD16                                                       <---------WRKY38(1)      --------->MYB52(1)                     --------->ALFIN1    <---------TOE2(2)     --------->AtMYB61                     <---------ANAC58      <---------TOE2(3)          <--------     <---------ALFIN1                      <---------ANAC58   --------->ANAC58   ------->MYC3    <---------MYB55(2)             --------->bZIP60(1)   --------->ZAT14     <---------WRKY12    <---------ABI4(2)              <---------bZIP60(1)   <---------ZAT18<---------ANAC58    ---------    --------->MYB46(3)          ----------->HVH21        --------->ZAT18<---------ANAC58    <-------- ----DOF2--------->LBD16        ----------->TGA1    <---------ZAT14   <---------WRKY18(1)   --------- -------------->WRI1          <---------AtLEC2<-------TEIL    --------->ANAC58  <---------ANAC46  ---   cttagaaccaccggagaagaagaagctcatatgcatgacgttatgaggtgcgagaatagtggacacgaaggttgacttgtcaacgtgtaactccagcttc  16495300                                                                                              <------               <------ZmHOX2a(2)                                                    <---------ANAC46 -ZAT2 --------->HSFB2a(2)                                                       <---------RAP2.6(2) >ZAT2 <---------HSFB2a(2)                                                 <------NtERF2   ---------- -At4g35610   --------->ARR11(3)                           --------->CCA1(2)   <-----------RAV1(1) >At4g35610   <---------ARR11(3)     <---------REM1(1)    <---------ARR11(3)  <---------MYB52(1) ------>LBD16<------ZmHOX2a(1) <---------MYB46(3)         --------->ARR11(3) <---------RAP2.6(3)   cgagtgtttttagaaggatcatgctcatcgaagttgttgatgaagcgagagacagcatgagatatgtcttcgatggagccgttgtggctgtgagcgacga  16495400                                                                --------->DAG2                                                              ---------->DOF2      <------MYB46(1)                  --------->MYB52(1)--------->ARR14(2)           <---------ANAC46      <------MYB83                    ---------->DOF2    <---------ARR14(2)      <---------ANAC46   <---------ANAC58          --------->REM1(2)        <---------ANAC58           <---------REM1(1)   <---------ANAC46         --------->ALFIN1 <--------P--------->LBD16   <---------ZAT2   <---------ANAC58 <---------MYB59  --------->AtMYB61<---------ANAC58   --------->At4g35610 ---ANAC46        ------->TEIL--------->ALFIN1        <---------ANAC46   <---------At4g35610 ->HVH21     --------->MYB52(1)--------->REM1(2)     <---------LBD16  <------ZmHOX2a(1)       -------   gtatggcttggttccaaacggacctaaaccgtgtggagaccaaaggggttagtcttgcggattcgaaagggaggaagctgatgatgtagagtagaagctc  16495500                  --------->ARR14(2)                  --------->ARR11(3)                  <---------ARR11(3)                  <---------ARR14(2)                 <---------GLK1(1)                --------->ARR14(2)                --------->ARR11(3)                <---------ARR14(2)         --------->TGA1a         --------->ANAC58         --------->ANAC58         <---------TGA1a     <------MYB46(1)                                           <----------DOF2     <------MYB83--------->GLK1(1)                            <---------ANAC58    --------->MYB46(2)                                        <---------ANAC46                    ---   ================MYC_MYB                                    <---------ANAC58                <------   <--------P   <---------ARR11(3)              <---------At5g28300                           <------   <---------MYB55(1)                  ----------->GT1 <---------ANAC46                 ---------->DOF2 -->ARR11(3)   <------ZmHOX2a(1)  ------>ZmHOX2a(1)<-----------HVH21              ----------->GT1 <--   tagcggtaggcacgagaggatatctggtttgtgttcctccatggttatttcactgtgaggtattgctttgaatttgctatggagaggttttaaagaaatg  16495600             --------->ANAC58             --------->ANAC58            ------->TEIL            --------->SPL7            <-------TEIL           --------->SPL1(1)         <---------ANAC55(2)         <---------ANAC58         --------->ANAC55(2)         --------->ANAC58         --------->ANAC58                            --------->YAB1         <---------ANAC58                           <------ZmHOX2a(2)        <---------------AtSPL3                  <------NtERF2        --------------->AtSPL3                 ------>NtERF2        <---------------AtSPL8                <---------DEAR3(1)        <-------TEIL                          <---------ANAC46    <---------TOE2(3)                         --------->DEAR3(1)    --------->MYB59   <---------GLK1(2)      <------NtERF2    <---------------AtSPL3 --------->YAB1  <---------DEAR3(1)                                     --- ---->TEIL <---------SPL1(1)          <---------ARR14(2)           ----------->GT1            <------ ---------AtSPL8--------->ARR14(2)    <---------GLK1(2)           ---------->ID1             -------- ---------AtSPL3<---------ARR14(2)    --------->ARR14(2)     <----------DOF2                <-------- -----TEIL<---------SPL7  <---------YAB1  <---------LBD16 <-----------GT1                  --------->AHL20(2)   tacgtttaggtacgtacggatttggattttcataaaactggattctcggcgtcgatcatgttacttttgttgttaaacacacttcttgatatatataata  16495700               <---------ANAC55(2)               --------->ANAC55(2)                    --------->bZIP60(1)               <------MYB83                           <---------bZIP60(1)               <------MYB46(1)                      --------->YAB1                          <--------              --------->MYB111(1)                ------>ZmHOX2a(1)                          ---------              --------->MYB46(2)                --------->TOE2(2)                           <--------      <----------DOF2                  <-------TEIL<---------YAB1                     --------->YAB1   --------->ARR11(3)                  ------->TEIL<---------ATHB12                  <---------YAB1   <---------ARR11(3)  *TSS         <---------ANAC55(2)                   --------->DAG2 --------->AHL20(2)  <---------CCA1(2) ----------->GT1 --------->ANAC55(2)                  ---------->DOF2<---------YAB1 -------->GT1 --------->MYB59      --------------->AtSPL8         <----------ID1   --------->YAB1 ---AHL20(2) <---------MYB55(1)    <---------------AtSPL8         ----------->GT1 <---------YAB1 ->YAB1     <---------MYB52(1)     --------------->AtSPL3        ----------->GT1  <---------ATHB12 -AHL20(2)  <<<<<<<<<MYB98---------->DOF2  <-------TEIL        ---------->DOF2  ------>ZmHOX2a(1)   ttgtatatctttttgttaggtattgtataaaagctaatacgtacatacatcctatgatgacactgaaaaggaaaaaaaagtcctatgatgataatatatg  16495800                                                            <---------KAN4(1)                                                            --------->KAN4(1)                                                           ---------->TaMYB80                                                       --------->ANAC46                             --------->ARR14(2)        <---------ANAC55(2)                             <---------GLK1(2)         --------->ANAC58                             <---------ARR14(2)        --------->ANAC55(1)                           --------->LBD16             --------->ANAC55(2)                          --------->HSFB2a(2)         <---------------------WRI1                         <---------LBD16              <---------LBD16  <------MYB46(1) -AHL20(1)            <----------DOF2             <-------TEIL   ---------->DOF2                    < >AHL20(1)         --------->ARR11(3)  --------->GLK1(1)   <---------KAN4(2)             <---------YAB1 -AHL20(2)         <---------ARR11(3) <------ZmHOX2a(1)--------->ANAC58<------MYB83  <---------GLK1(2)   atgtcttcattcgtatttcaacatctttccggattttggaggaatccaaatgttcatacggaatattcaaagttggttttgaagtcagattgtcatggat  16495900                          <---------DAG2                 <---------CCA1(1)                 <---------RVE1(1)                <---------ARR11(3)                   <---------YAB1                --------->ARR11(3)             <-------TEIL                <---------ARR14(2)     ----------->HVH21                --------->ARR14(2)   <---------ANAC55(2)    --------->ANAC46      <----------DOF2  ------>ZmHOX2a(2)       --------->ATHB12 ---------AHL20(2)    <---------YAB1 --------->ANAC55(2)      <-------TEIL  --------->YAB1   atataaacgcagagaccagatattatgactttttgtgatatgtgatcggtccattttgtttggattcatagattggaatcatagactggtccagtttcaa  16496000                       --------->ATHB12                   <---------AHL20(1)                   --------->AHL20(1)                           <----------DOF2                   --------->AHL20(2)                         ------->TEIL                   <---------ARR11(3)                 <------MYB83             <-----------GT1                         --------->MYB46(2)        <---------ANAC58          --------->ATHB12   --------->MYB59        <---------ANAC58         <---------YAB1    <---------MYB52(1)      <---------DOF5.7(2)      <----------DOF2 ----------------->AGL1    --------->DOF5.7(2)--------->ATHB51  <---------ANAC58   ------->GAMYB    <---------MYB52(1)<---------AHL20(2) <---------ANAC58  <---------MYB52(2)   --------->TOE2(3)  <---------YAB1<---------WOX13(1)<------MYB46(1)                     -----------   tttttcgttagcgttttacaaaatattattgggctttgattgggcttgggccagtttggtaacgaactttgttaaccaagtttggatgtaaacagaaaaa  16496100                                                                              <-------TEIL                                                                             --------->ARR14(1)                                                                             --------->GLK1(2)                                                                             --------->CCA1(2)                                                                            <---------GLK1(2)  <-----                                                                            --------->ARR14(2)------>ZmHOX2a(2)                                                   --------->MYB52(1)       <---------ARR14(2)=======              <---------GLK1(2)                    *TSS---------->DOF2 <------NtERF2         <------ZmHOX2a(2)  --------->ARR14(2)                    --------->ARR14(2)             <XXXXXXXXXXXXXXXXXXXXXMIR777  <---------ARR14(2)                    <---------ARR14(2) ----------->GT1----------->ARR10  ========  --------->GLK1(2)          --------->ARR14(2) <---------ANAC58      ------>NtERF2         --------- >GT1     --------->YAB1     <---------ARR14(2) <---------ANAC58     <----------ID1         <--------   acaaaatccgaatcaaaattctcaaatagccgattttgagcaaattcgatgcttaacgaaagggtttaatggcgacgagattcgatgtgaagacgatcgt  16496200  Previous    Next  AGI:  At2g39490.1    Description:  F-box family protein. Identical to F-box protein At2g39490 [Arabidopsis Thaliana] (GB:Q5S4V7;GB:O80636;GB:Q8H1M8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G61330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68497.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 16493980    to: 16495723    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39500.1    Description:  similar to Os01g0974800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045558.1); similar to hypothetical protein OsJ_004838 [Oryza sativa (japonica cultivar-group)] (GB:EAZ15013.1) Range:  from: 16496151    to: 16496666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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