Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ---------->DOF2                                 <---------WRKY12                           <------MYB83                                 <---------WRKY45                       <---------MYB46(3)                                 <---------WRKY38(1)           <---------ARR11(3)                                <<<<<<<<<<WRKY40               --------->ARR11(3)<-----------GT1  ---                                <<<<<<<<<<WRKY18              --------->YAB1<------MYB46(1)      <---                                --------->WRKY18(1)        ---------->DOF2  <---------MYB46(3) <-----                                <<<<<<<<<<WRKY62       ---------->DOF2  --------->MYB55(2)     ------   gactactcactgaatgagcttcttcaatgttttggtcaaaggaagagactgagaaatgaaagaaagataatcagttgttggtttttctctccttgtctgc  16477900                       ----------->GT1                <---------YAB1             --------->ICU4                    <---------YAB1             <---------ATHB51               ============================HOX2a_HOX2a           --------->WOX13(1)               <------ZmHOX2a(2)      <---------ARR11(3)                   --------->AGP1      --------->ARR11(3)                   --------->ARR11(3)                                  <----- ------>At5g28300  <---------YAB1    --------->ZAT14                                <---------AHL20(2) -------DOF2 <---------ATHB12        <---------ZAT14                                --------->AHL20(2) ----At4g35610--------->YAB1     --------->GLK1(2)               <------ZmHOX2a(1) --------->AHL20(2) --->At4g35610<---------ICU4    <---------GLK1(2) --------->CCA1(2)                --------->YAB1   tgtaactagatatcaattatgaagattgtaaatagattctgtacagatcaagatagaccaatttgaaggactacatataaacgaattaaaatgaaaactt  16478000                                                           <---------YAB1                                                           --------->ICU4                                                         --------->YAB1                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58                                                  --------->MYB52(1)                                                  ------>MYB46(1)                                                <---------MYB59                                                <---------MYB111(2)                                                <---------MYB46(2)                                                <---------MYB55(2)                                                <---------MYB52(2)                                                --------->MYB46(3)                               --------->ARR11(3) ------>MYB83<---------WOX13(1)                               <---------ARR11(3)--------->MYB55(1)                        <---------ICU4          <---------MYB111(1)                        --------->YAB1         <---------ANAC55(2)                           <-------    --------->TOE2(3)  --------->ICU4          --------->At4g35610                    --------->AHL20(2) <-----------GT1  <---------At4g35610          --------->ANAC55(2)    --------->TOE2(3)      <------- -----DOF2   <---------ZAT6<------ZmHOX2a(1) <-----------GT1--------->ATHB12       ----------->GT1   tattaacctcacttagtggaagctaatgaggacgatattgaaactaatcacctaacgaaacatgattgaaaacattaatctagaccagttaaatagcgtc  16478100                                                                                  ------->TEIL                                                                                  <---------TOE1(2)                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                              --------------->AtSPL8                                                                              --------------->AtSPL3                                                                              <---------------AtSPL3                                                                             <---------ARR11(3)                                                                             --------->ARR11(3)                                                                      <---------ATHB12       <------NtERF2                                                       <-------TEIL --------->WOX13(1)      ---------  --------->YAB1             <-------TEIL             --------->CCA1(2)  ---------->DOF2  <---------LBD16 --ANAC58       --------->MYB52(1)  --------->WOX13(1)--------->GLK1(2)--------->YAB1<----------DOF2 --ANAC58---------->DOF2    --------->CCA1(2) >>>>>>>ZML2         <---------YAB1<---------SPL7   <---   tccatcaaaactaaagactaatggtagaagattcaaatccatcacgttctagtgagattcaaggggttatcaatgaaaagatcgtacctttagccggaga  16478200                   --------->ZAT6                            ------>ZmHOX2a(2)           <---------GLK1(2)                               --------->ARR14(2)          -------->HAHB4              ==============================HOX2a_HOX2a         <---------YAB1               <------ZmHOX2a(1)    <---------ARR14(2)    --------->ANAC58               <---------LBD16      <---------TOE1(3)    --------->ANAC58           <-----------HVH21     <---------MYB52(1)             --------->GLK1(1)  <---------ANAC46 --------->ANAC46<-----------RAV1(2)  <---------TOE2(3) <---------REM1(1) >LBD16  --------->ICU4    --------->GLK1(2)    --------->GLK1(2)  ---------->DOF2 --------->ARR11(3) ------O2<---------ATHB12 <---------GLK1(1)----------->GT1<------ZmHOX2a(1)        <---------ARR11(3)   catggctcgaaatgattcttcacactagaaatctgtctcaggaaaacgaaaatcagttaaggatcggacaaaagaaatgtagggagatatcgagagacag  16478300                                   <---------ZAT2                   <---------LBD16 <---------At4g35610                  ----------->RAV1(2)                 --------->GLK1(2) ===============================RAV                 ------->TEIL      --------->ZAT2              <---------MYB52(2)   --------->At4g35610                                <---------ICU4              --------->ANAC46     ----------->RAV1(2)                                --------->YAB1              --------->ANAC58   <-----------RAV1(2)                                 <---------ATHB12              --------->ANAC58  <---------At4g35610                              ------------>CBF     --------->GLK1(2)       ---------->DOF2                                    --------->TOE2(3)    <---------ARR14(2)      --------->ALFIN1                   <------NtERF2    ------->GAMYB    <---------GLK1(2)       ----------->HVH21         <-----------RAV1(1)      --------->MYB46(3)    --------->ARR14(2)  *TSS<---------REM1(1)       <----------DOF2       <----------DOF2  --------->At4g35610   attgcagaatcgagacacgaacctggagaggtgaagcagctgagactcaaactactttgttgggcctcgaatgggcctttaaccacaatcatcatctaac  16478400                                                                                                 ----                                                                                                -----                                                                                             --------                   <---------YAB1                                                            --------                   <---------AHL20(2)                                                        <-------                  --------->AHL20(2)                                                        <--------                  --------->AHL20(1)                                                      --------->YAB1                  <---------AHL20(1)                                                    <---------ARR11(3)             ------>ZmHOX2a(2)                                                          --------->ARR11(3)             ======================HOX2a_HOX2a                                         --------->YAB1      --------->CCA1(2)                    <---------GLK1(2)                          ----------->GT1     <---------ARR14(2)                  --------->ANAC58                   ---------->DOF2 <--------     --------->ARR11(3)     ------>ZmHOX2a(1)       <---------AHL20(2) <---------------AGL15---------     --------->ARR11(1)--------->YAB1    --------->ANAC58        <---------DAG2     ---------->DOF2   ----------->ARR10--------->YAB1  ----------->HVH21            <----------DOF2---------->DOF2 -----   ccagtaagatttggatcgaatataataatcctccataagtgacaagaatttcatttttttgtttgcacttttcacaaaaaaagaaagaaagataataatg  16478500     <------ZmHOX2a(1) ----->At5g28300         --------->ANAC58 ------>GT1              --------->ANAC58 ->YAB1             --------->ZAT18                                                          -------- >HAHB4             <---------ZAT14                                                         <-------- --ICU4             --------->At4g35610                                                   <---------ANAC58 -ATHB51            --------->ZAT14                                                       <---------ANAC46 -YAB1        ------>ZmHOX2a(1)                                                           <---------- >ICU4       <---------ALFIN1                             <---------KAN4(2)      <-----------GT1 ---->YAB1 ------>ZmHOX2a(1)      <-------TEIL     <------ZmHOX2a(2)--------->MYB52(1)    <---------ANAC58   gtaaataggactcctcctcgtctgcacaagacaacatccatttgaatatgtggatcagagaataaactactaatggtttttttttgcaatttgtgtggtt  16478600             <---------ANAC58                                                               ---------  --------->YAB1                                                                            --------- --->GT1     <---------ANAC58                 --------->ATHB12         --------->ARR11(3)   --------- -AtMYB61  <---------YAB1               <----------DOF2               --------->YAB1        --------- -RAV1(1)<---------At4g35610            <---------DAG2          ----------->GT1             <--------   tctattatgtcttctgcttgagactaatctaacatatgtcaactttattcattgagactggaagagaagttataatcttgttgctaaatgaaacacgcaa  16478700                                                                                                    <                                                                                                  <--                                                                                                  <--     --------->AHL20(2)                                                                           ===   ----------->GT1           <---------CCA1(2)                        <---------AHL20(2)         ---- ---------->DOF2           <----------DOF2                           --------->AHL20(2)          <--- >ANAC46                   <---------DAG2                            <---------AHL20(2)          ---- >ANAC55(1)         <---------ARR11(3)                           --------->ICU4   --------->CCA1(2)== >ANAC58            --------->ARR11(3)                           <---------YAB1  <---------ARR11(3)-- >ANAC58  ----------->GT1 --------->TOE2(3)               --------->ZAT14        --------->ARR11(3)<- -ANAC55(2)       <---------TOE2(3)                       <---------ZAT14    ---------->DOF2    <----   aacaaaagtaaatagttacaaaggtattcctttatctcacaattgtctactaaacaacaatacagtgaagattaatttgtaaagatatagaaacgtagag  16478800  Previous    Next  AGI:  At2g39445.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44579.1); contains InterPro domain PIG-P (InterPro:IPR013717); contains InterPro domain Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (InterPro:IPR016542) Range:  from: 16477103    to: 16478324    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39450.1    Description:  ATMTP11/MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese:hydrogen antiporter. similar to cation efflux family protein [Arabidopsis thaliana] (TAIR:AT1G79520.1); similar to Mn-specific cation diffusion facilitator transporter [Populus trichocarpa] (GB:ABP68859.1); contains InterPro domain Cation efflux protein; (InterPro:IPR002524) Range:  from: 16478710    to: 16480896    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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