Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <--------HAHB4                               --------->ATHB51                               <---------ICU4                              --------->ICU4                              <---------YAB1                            <---------------AGL15                            --------------->AGL15                            --------->YAB1                --------->GLK1(2) ----ALFIN1    <---------GLK1(2) ---ZAT18     <---------At4g35610 -->ZAT18     --------->At4g35610      ---------->DOF2      <---------MYB46(3) >PCF2     ------>ZmHOX2a(1)--------->TOE2(3)               ----------->GT1        --------->ZAT6 -ZAT18   --------->TOE2(3)----------------->AGL2     <<<<<<<<<<<<<<<<<LFY     ---------->DOF2   cttgtatcaattcctcagattccttctataccataattagccaaagttaacaatttggacaatggttaaatcccaaacccataaaacactagtcaaattg  16476300                                       -------->P                        --------->DAG2            ==                                  ------>MYB83                          ---------->DOF2            <-                  --------->ZAT6  ------>MYB46(1)                --------->WOX13(1)                <-                <-----------GT1 <---------MYB59               <-----------GT1                     <--        --------->YAB1          --------->TOE2(3)         <---------MYB52(1)         <-----------GT1-       <---------ATHB12      <-----------GT1      <---------GLK1(2)  --------->TOE2(3)            ---   gtatgagcaatcgtcttataacagtagaaaataacctaatctaccaaaatttgattctctgttatatcaatccataaagtatcaattttgctacctcgaa  16476400                            <---------ARR11(3)                            --------->ARR11(3)                            <-----------GT1                           --------->CCA1(1)                   <------ZmHOX2a(1)     <<<<<<<<<<WRKY63 ----------->GT1 =========================HOX2a_HOX2a       --------->ARR14(2)                       <---------ANAC46 --------YAB1------->TEIL  --------->RVE1(1)<---------ARR11(3)                    ----------->TGA1 -----ZmHOX2a(2) --------->LBD16            --------->ARR11(3)                    ----------->HVH21 -------ARR11(3)<---------LBD16             <---------GLK1(2)                   <------MYB46(1) ----- -------->YAB1 --------->TOE1(2)            <---------ARR14(2)                  <------MYB83  <------ ------>ARR11(3)<-----------RAV1(2)       <---------TOE1(2)            ----------->GT1      ---------   gatcatagtcaaatgaacccaggagagaaatatccctccagtcccagattttgagttttagttcgaacaaaactcgaaaatttggtgacgagaattaaac  16476500                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                            <--------                                                                                            ---------                                          --------->GLK1(1)                             --------->DAG2                                          <---------GLK1(1)                            ---------->DOF2                                      --------->ANAC58                             --------->AtLEC2                                      --------->ANAC58                             --------->ANAC58                           --------->ANAC58                                        --------->ANAC58 ---->ZAT6                 --------->ANAC58                                       --------->WOX13(1) -----GT1              >>>>>>>>>TBF1--------->MYB52(1)                      --------------->AGL15 >AHL20(2)             ------------------------>ANAC81                      <---------------AGL15   tctaccaatacagaagagtagagaagaagaagcaaataaaacggaaatcacaaaatgccaaacacaagtcttacattacaaaatcaagcaaaagcgcacg  16476600 ---->MYB52(1)                                            <---------DEAR3(2) --->ANAC58                                               <------MYB83 ----->HVH21                                              <------MYB46(1) --->ANAC46                                              <---------MYB46(3) --->ANAC58                                           <---------ZAT2 -->SPL7                                              --------->ZAT2 -ZAT18                                   <---------TOE2(3)                           <---------AHL20(2) >ZAT18                                   ---------->ID1--------->ALFIN1      --------->ATHB12     <-   acggagattgagagaattggtctctgagagaaaactgctaatttgtggttttcccaaggtgggttctaaaatggtctgaatgtttgattttttttttttt  16476700                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  <---------ICU4                    <-----------GT1               --------->ATHB51                    <---------AHL20(2)           --------->AHL20(2)                <---------YAB1                   <---------AHL20(1)                  <---------ZAT6               <---------AHL20(2)                <---------AHL20(2)              <--------P               <---------AHL20(1)            <---------AHL20(2)               <---------YAB1<--------       --------->ATHB12     <-----------TBP  --------->AHL20(2)               <---------TOE1(3)     <      *TSS     --------->AHL20(1)           --------->AHL20(2)                <---------TOE2(3)  <--- ----------GT1--------->AHL20(2)       ------------>CBF              <---------AHL20(2)     <--------   ttcactgaatgtttgattatatttacttatatttatactgaaacaatttaaattatttctcttaaacacattttttttttatggttagtgtttttcttga  16476800                                                                           <---------ANAC58    --------------->AtSPL8                                                 --------->ANAC55(2)    <---------------AtSPL3                                                 <---------ANAC58    <---------------AtSPL8                                                <---------LBD16   <------------CBF                                                      <-----------GT1 ------>MYB83 <---------YAB1               <---------ANAC58                    <---------ICU4         ------>MYB46(1) -ANAC58                      <---------ANAC58                    --------->YAB1       <---------MYB46(2) ---------GLK1(2)             <---------ANAC46                 --------->YAB1          <---------MYB59 ------WOX13(1)       --------->GLK1(1) ---------->DOF2   --------->AHL20(2)  <-----------HVH21 -ANAC58         <---------LBD16----------->GT1 --------->YAB1<---------AHL20(2) --------->WOX13(1)   tagattattgtacttcattttcggacatccaggcttgtaaaaaaaagcatgcataagtttttatataatcatgttttacgggtcaattaccaaacttgag  16476900                                                           <-----------HVH21          --------->YAB1                                                          --------->WOX13(1)          <-----------GT1                                                         ------>ZmHOX2a(2)         --------->YAB1                                                         <-------TEIL          <---------ICU4                                                        <------ZmHOX2a(2)      --------->YAB1                                                       --------->ARR14(2)      --------->ATHB12                                                       <---------ARR11(3)      <--------HAHB4                           ----------->HVH21           <---------ARR14(2)     <---------YAB1                          <---------WOX13(1)          <------ZmHOX2a(1)       <---------ATHB12                        <---------MYB46(3)        --------->ZAT14             --------->ICU4                 <---------ZAT6                   <---------ZAT14         --------->ARR11(3)        --------->ATHB12--------->ATHB12          <---------ZAT18         <---------ARR11(3)    =====        <---------ICU4 <---------YAB1             --------->ZAT18--------->ZAT14 <---------YAB1 <----       <---------YAB1  --------->ICU4        --------->ARR11(3)  <---------ZAT14--------->TOE2(3)   tttctcttgatgatttctactggtaatggttgacatataagaagaaagatagtgcaggatccatcactggactggagataatcattaatcacaatctcct  16477000    <-------MYC3    ------->MYC3    <-------MYC2    ------->MYC2   <---------ANAC55(2)   --------->ANAC55(2)   --------->O2   --------->ANAC58   --------->ANAC46                                                    ----------->GT1   --------->TGA1a                          --------------->AGL15     <---------YAB1   <---------O2                             <---------------AGL15     <---------TOE2(3)            --   <---------TGA1aXXXXXXXXXXXXXXXXXXXX>MIR841B             <---------ANAC58              --------->GLK1(2)   --------->ANAC58           --------->TOE1(3)            <---------ANAC46        <---------HSFB2a(2) ============bZIP_DOF         --------->TOE2(3)            <---------ANAC58     --------->ZAT6     <- ------DOF2  --------->ZAT14 ----------->RAV1(2)--------->YAB1     --------->ICU4  --------->HSFB2a(2)   tttacacgtgatcactctactagtcactaaaacctgaatccatttactaatgagagtaatggcttagtcaatatggttactacctctagagaatttgaaa  16477100                                                                                                    <                                                                                               ======                                                                                               ------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                      <---------ALFIN1                        <------ZmHOX2a(2)                                           ------>ZmHOX2a(1)      <---------ANAC55(2)      <---------YAB1                ------>ZmHOX2a(2)   ------>MYB46(1)    - <-----------GT1       --------->ARR11(3)                    ==============================HOX2a_HOX2a ------->AHL20(2)      <---------ARR11(3)      <-----------HVH21                 ------>MYB83<------- --------AHL20(2) --------->TOE1(2)       <---------YAB1   <---------AGP1   <-----------GT1 ---------   ttttaatcacttgaattgaacataagatcatttattcttgtaatatcaatgtcagagattggatctataggcctgtcttcaccttcctccatcccagcag  16477200  Previous    Next  AGI:  At2g39440.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK92865.1); contains InterPro domain Ribonuclease H1 small subunit (InterPro:IPR013924) Range:  from: 16475059    to: 16476706    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g39445.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44579.1); contains InterPro domain PIG-P (InterPro:IPR013717); contains InterPro domain Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit (InterPro:IPR016542) Range:  from: 16477103    to: 16478324    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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