Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->MYB46(3)                                                                                --------->HSFC1(1)                                                                                <---------HSFC1(1)                                                                                --------->HSFB2a(2)                                                                                <---------HSFB2a(2)                                                                              <------ZmHOX2a(2)                                                                             <---------AGP1                                                                             <---------ARR11(3)                    --------->ARR14(2)                         --------->MYB52(1)  <<<<<<<ZML2                    <---------ARR14(2)                      --------->ANAC58 --------->AGP1                   <------ZmHOX2a(1)                        --------->ANAC55(1)------>ZmHOX2a(2)               --------->LBD16                   <---------TOE2(3)    <---------AHL20(2)             <---------ZAT14           <------MYB83         --------->ANAC58 --------->ARR11(3)   ---       --------->YAB1                  <------MYB46(1)      --------->ANAC46<---------CCA1(2)  <-----   catagccaataagactccagaggaaactctctgattcggcttggtttggctaatgtttttagacgcaacgatttacttagatctagaaccatcagattaa  16465600                                       ---------->DOF2                            --------->ANAC58                            --------->ANAC58                      --------->HSFB2a(2)                      <---------HSFB2a(2)  --------->ARR11(3)                           <---------AHL20(1)                      <---------HSFC1(1)   <---------GLK1(2)                            --------->ARR11(3)               <---------TOE1(3)    --------->TOE2(3)                                   --------->AHL20(1) --------->TOE2(3)    --------->HSFC1(1)   <---------ARR11(3)                         <---------AHL20(2) -------->RAV1(1) <----------DOF2  <----------ID1   ---------->DOF2  ---------->DOF2  <---------AHL20(1) ------GT1 <----------DOF2--------->MYB52(1)--------->GLK1(2) <---------YAB1          --------->AHL20(1)   caacataaaacaactttaagctttcgagaaacggaaaaccacaaagattcttagcaaagaattcatcaatgtaaagaacattgtctaaaatattttggta  16465700                                    --------->ZAT2                                    <---------ZAT2                          <---------ANAC58                                                 --------->WOX13(1)                          <---------ANAC58                           <---------ZAT18----------->RAV1(2)               --------->GLK1(2)    <---------STY1(2)          <-----------HVH21  --------->ARR11(3)           --------->YAB1<---------HSFC1(2)             --------->ARR14(2)    ---------->DOF2  ------ ----------->GT1         --------->HSFC1(2)             XXXXXXXXXXXXXXXXXXXX>MIR166A-G------>ZmHOX2a(1)   tagaggtgaaaactcataatcttgggaagcttgtatcgagctagggttttgtttatcgtatcagccttcagtcccctatacaaagttcctggtccatcaa  16465800                                                                                            <--------                                                                                            <--------                                                                                         --------->ARR14(2)                                                                                        =============                                        --------->ZAT18       --------->At4g35610       <------ZmHOX2a(1)                                     <---------ANAC46    <---------YAB1            <------ZmHOX2a(1)<             <-----------HVH21------>NtERF2           <---------ARR14(2)           ================== ---->DOF2--------->ALFIN1--------->ANAC46        <---------ZAT14        --------->ETT(1)<---------ARR14(2)   agtatatgtaaggtgtgtcagaccatacatgcctccatcgtgtggacaagactgaagttctgatagctaaattggtcggaagagaggagaggatttgttg  16465900                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                               ------                                                                                               <-----                  --------->ZAT2                                                               <-----                  <---------ZAT2                                                              <------  ================HOX2a_HOX2a                                                                 <------  <------ZmHOX2a(2)                                                         <---------YAB1    ------- <-----------ARR10--------->At4g35610                <---------ANAC58       --------->ICU4    ------- -MYB46(3)      --------->ZAT18                      <---------ANAC58     --------->YAB1      ------- ---RAV1(1)<------ZmHOX2a(1)                        <---------STY1(2)    <---------ZAT6      -------- ========HOX2a_HOX2a   <---------WOX13(1)           --------->STY1(2)    --------->ICU4     <-------- ------ZmHOX2a(1) <---------At4g35610         <---------CCA1(2)      --------->ZAT14       ---------- ========HOX2a_HOX2a --------->ATHB12        ------->TEIL            <---------ZAT14      <----------   gaggatcacatcaggaagcgagctgattgagtctatattttcacttgcatctcttgctagtttgacatctctgtagtgatgatgagcgtagcagtcaccg  16466000      <------NtERF2      --------->DEAR4(2)     ------>NtERF2   <------NtERF2   <---------ABI4(2)   --------->ATERF1(1)  <---------ATERF1(1)  ------>NtERF2  --------->ABI4(2) --------->ALFIN1 ------NtERF2 -------GAMYB -------->ATERF1(1) --------MYB46(3)          --------->At4g35610 --------DEAR3(2)       <------NtERF2 --------DEAR4(2)       --------->ATERF1(1) --------ATERF1(1)     <---------ATERF1(1) -------DEAR3(1)       ------>NtERF2 -------DREB2C(2)      <-----------HVH21 ------>ALFIN1        --------->RRTF1(3) ------ABI4(1)        --------->DEAR3(1) --->DEAR3(1)         --------->RAP2.3(2)             --------->MYB52(1) ----ATERF1(2)        --------->RAP2.3(3)            <---------ALFIN1 ----DEAR3(1)        --------->ATERF1(1)             --------->AtMYB61 ---At4g35610        --------->RAP2.3(1)             ------->GAMYB ---LBD16           ------>NtERF2           --------->TOE2(3) -->At4g35610       --------->LBD16        <---------ANAC55(2) -->DEAR3(2)       --------->ANAC46        --------->ANAC55(2)                       ----------->HVH21 -->ATERF1(1)     <---------LBD16<---------At4g35610<---------MYB55(2)  <---------RVE1(1) ->MYB52(1)     --------->ARR14(2)      <---------MYB52(1)<------------CBF       ------------>CBF -WRKY38(1)     <---------ARR14(2)  ------>NtERF2  -------->P           <---------CCA1(1) ->HVH21       <---------MYB52(1)--------->At4g35610--------->MYB46(3) <---------ARR11(3)     <------ -HVH21--------->DEAR3(1)  <---------At4g35610    --------->WOX13(1)   --------->ARR11(3)     <------   gcggtggcaccgtctccgtttccgccgtcgtctgcctctgccattacgttatcaaccaccgattgtaaacctagatatttgtttgcaatgacatagcttt  16466100                                                                                          --------->LBD16                                            --------->AHL20(2)                     <---------ANAC58                                            --------->AHL20(1)                     <---------ANAC58                                            <---------AHL20(1)                   <-----------GT1                                ----------->TBP                              <---------DAG2                          --------->ZAT2  <---------ARR11(3)                 <----------DOF2 --------                          <---------ZAT2  <---------AHL20(1)           --------->ANAC46  <---------HSFB2a(2)                          --------->At4g35610      ---------->DOF2   --------->ANAC58    --------->HSFB2a(2) ---DAG2          ---------->DOF2         --------->AHL20(1)         --------->ANAC58    --------->ANAC46 ----DOF2      --------->YAB1 <-----------TBP  <---------AHL20(2)    --------->ANAC46   <---------LBD16   ttgagtttttgggtttatcacaaagcccagctatatatatccaaaatattttaaaaagcccattactaaacacgcacaacttttttcttgtccggaactc  16466200                                                          ------>MYB46(1)                                                          ------>MYB83                                                        <---------MYB111(1)      --------------->AtSPL8                            <---------MYB111(2)      <---------------AtSPL8                   <---------------AtSPL8      ------->TEIL                             --------------->AtSPL8                         <------ ->GLK1(1)------->TEIL    ----------->GT1   --------->AHL20(2)     --------->ICU4            <-------   aaaatatgtatgtacttaacaacttaatctgtgaaaaaaaaaaaaaaaaaatgtactaccaacttagtcatgttgatgtgatcatcttcttcttggattg  16466300                                                    --------->ANAC46                                              <---------ANAC58                                              <---------ANAC46                                           <---------WOX13(1)                                          <------------CBF                               <------ZmHOX2a(2)                                         -------->HAHB4                           <------MYB83                                         <---------ICU4                           <------MYB46(1)                                         --------->ATHB12                        <---------AtMYB61                                         --------->ATHB51                       <---------WOX13(1)                                         <--------ATHB1                        <---------GLK1(2)               ----------->GT1          --------->ICU4                    --------->MYB52(1)   <-----              --------->DAG2            --------->AHL20(2)             <---------ANAC58 --------->ARR14(2)    --------------->AGL15               <---------AHL20(2)             <---------ANAC58 <---------ARR11(3)    <---------------AGL15               <---------ATHB51               --------->YAB1   --------->ARR11(3) <-----------GT1   ------------>CBF     <---------YAB1                 <---------ANAC55(2) <--------- ---WOX13(1) ---------->DOF2     --------->YAB1   --------->ZAT6       --------->ANAC55(2)------>ZmHOX2a(2) -----CBF <---------HSFB2a(2)------>ZmHOX2a(2)<---------ANAC58      <----------DOF2     <---------ARR14(2)   atattactagttgcagaaagtgacaatttgatctattagaaaataattgcttatactacacatttgttttctttcgtaacagattggtgggatctttaag  16466400           <---------GLK1(2)         <---------YAB1            <----------DOF2     <-----------TGA1  --------->HSFB2a(2)    --------->YAB1  <---------AHL20(2)                   <---------GLK1(2)  ------->TEIL     --------->AHL20(2)                 --------->ANAC55(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----TOE2(3)   <---------YAB1      <---------DAG2 <---------ANAC58        <---------MYB52(1) -DOF2   --------->ICU4<---------HSFB2a(2)        <---------ANAC58    --------->MYB52(1)   aatgtatcgtcatgattctgattttatagaagaacaactttatttaagatgtgcttacatattctgcgaaaaaaccggcatgttgaatggttttagtctc  16466500  Previous    Next  AGI:  At2g39415.1    Description:  F-box family protein. Identical to Putative F-box protein At2g39415 [Arabidopsis Thaliana] (GB:Q3EBJ8); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G49610.1); similar to Os01g0595800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043472.1); similar to hypothetical protein OsI_002638 [Oryza sativa (indica cultivar-group)] (GB:EAY74791.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 16465685    to: 16466044    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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