Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ANAC58                      --------->ANAC58                     --------->WOX13(1)                                                      <-------                   <---------ATHB12                                                       --------->GLK1(1)                  ------>MYB46(1)                                                         <---------GLK1(1)                  ------>MYB83                    <---------WOX13(1)               <-----------GT1                 --------->WOX13(1)             --------->ATHB12               <---------YAB1<-------               --------->MYB46(3)  --------->HSFB2a(2)                       <---------AHL20(2)   ---              --------->ANAC58     <---------HSFB2a(2)                   <---------DAG2  --------->ARR14(2)              --------->ANAC58     --------->HSFC1(1)                    <----------DOF2 <---------ARR14(2)          --------->TOE2(3)        <---------HSFC1(1)               --------->ANAC58   --------->LBD16 -DOF2 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---------YAB1       --------->ANAC58 <---------LBD16   ttattagatttatctcaaccaatcactcaattagtttctagagattgttgtgattgctatactacatgttaagcactttttatttttgccggatttcttg  16430300                  --------->ANAC58          <------NtERF2                  <---------MYB59        <---------DEAR3(1)    <---------AHL20(2)       <--------P --------->ANAC46 --------->YAB1                 <-----------GT1 ---------->DOF2  --------->ANAC58<-------TEIL             <-----------GT1   --------->ARR14(2) --ANAC58<------MYB83         --------->AHL20(2)        --------->ANAC55(1)  <---------ARR14(2) --ANAC58<------MYB46(1)     --------->AHL20(2)         --------->ANAC46     <---------ARR11(3) -------------->AGL1       --------->TOE2(3) --------->At4g35610--------->CCA1(2)       XXXXXXXXXXXXX   gccaaaagggttggcgatagaagcaactacattaaattcatgacctaagctaaattacatgtaacgatatacaatacaagatttgtctaaactaaacatt  16430400                                                                                 --------->At5g28300                                        <---------ANAC55(2)                     ------->GAMYB                                        --------->ANAC55(2)               --------->ANAC46    <------                              <-----------GT1                       <---------O2--------->TOE1(3)     ------->GAMYB       <---------AHL20(2)      <---------AHL20(2) <---------bZIP60(1)       -------     --------->AtMYB61  --------->AHL20(1)       --------->AHL20(2) --------->O2--------->TOE2(3)    --------->MYB46(3)  <---------AHL20(1)   --------->YAB1         --------->bZIP60(1)--------->TOE1(2) XXXXXXX>MIR849         <---------ARR11(3)  <---------YAB1  <----------DOF2  --------->MYB52(1)     <   gattcaaccaaaacttatatagactatatatttaacccaaatacttatcatataaatgttttcttttttgacgtcaacacaaccgtaaacattcgaaatc  16430500          --------->ATHB51          <---------AHL20(2)          --------->AHL20(2)          <---------ICU4         --------->ICU4      --------->AHL20(2)                                                          --------->DAG2      <---------AHL20(2)                                              <------ZmHOX2a(2)     --------->AHL20(2)                                              <---------ARR14(2)  <---------AHL20(2)                                                 --------->ARR11(3)          ---- <---------AHL20(1)                          <------------------------ANAC81    ---------->DOF2  <--- --------->AHL20(1)  <---------ANAC58      <---------MYB52(1)        --------->ARR14(2)         ----- ---ARR11(3)         <---------ANAC58 --------->ETT(2)               --------->AGP1          -------- -->ARR11(3)  <-----------GT1 <---------AHL20(2)                    <---------At4g35610--------->ANAC58 ---------CCA1(2)  <---------YAB1     <---------ETT(2)              --------->At4g35610--------->ANAC58   ttatatatttaattatttactatgcttgttatttcatttgtcgacgttgttttttttttttgcattcttcagatccactaagaaaaggcaagtccgaaag  16430600                                                                    -------->P                                                                    ------>MYB46(1)                                                                  --------->DEAR3(1)                                                                  ----------->HVH21                                                                 --------->MYB46(3)                                                                 --------->DEAR3(2)                                                               --------->MYB52(1)                                                               ------>MYB46(1)                                                               ------>MYB83                                                             <---------MYB59                                                             ------->GAMYB   --------->ANAC58                                                            --------->MYB46(3)      <---------ZAT14                                                        --------->LBD16      --------->ANAC58                                    --------->LBD16    --------->ANAC58    ------>NtERF2                                   --------->ANAC58    --------->ANAC58   --------->DEAR3(1)                                  <---------LBD16      --------->ANAC46  --------->SPL7             -                                <---------ARR14(2)     <---------ANAC55(2)--------->O2       --------       ------------>ATHB5       --------->ARR14(2)     --------->ANAC55(2)<---------O2   --------->LBD16    <---------PCF2            ----------->HVH21       <---------LBD16 <---------MYB55(2) --------->At5g28300 ----->ARR11(3)       ----------->TBP ---------->DOF2 ------>ZmHOX2a(2)----------->HVH21--------->TOE2(3) ------ARR11(3)       <---------AHL20(2)            <---------ARR14(2)--------->MYB46(3)----------->GT1 ---->YAB1          ----------->TBP--------->ANAC58 --------->ARR14(2)--------->DEAR3(2)<---------ANAC46 -->DOF2  <---------ATHB12    --------->ANAC46  ----------->RAV1(2) ------>MYB83    --------->ZAT14<-   ataatgggcccaattagtggctatataaaaacccgacccggaaagactaaacctgatccgcaaccgaaccgacccgacgacgctagtataccgtaaaaat  16430700                                                             <---------ANAC46               --------->LBD16               <---------GLK1(2)--------->LBD16                     <--               ------>NtERF2                <---------HSFB2a(1) --------->ZAT14         <-----------GT1   --------->GLK1(2)----------->RAV1(1)     --------->HSFB2a(1) <---------ZAT14    <---------GLK1(2)< ----------->CBF *TSS                  --------->HSFB2a(2)  <---------LBD16        <---------ARR11(3) ->ICU4      <---------LBD16           <---------HSFB2a(2)<-----------GT1      <---------MYB52(1) --- ----------GT1--------->ANAC46    <<<<<<<<<TBF1   ------>ZmHOX2a(1) ----------->GT1--------->ARR11(3)   ttgacaatcttcgtctccggcacaacaaaattgttcttcttcggcaagattcctcgattttctccgtgttctgtaatttccgatagattttgacaactct  16430800                              <---------At4g35610                              --------->At4g35610            <----------DOF2  <-----------GT1       <-----------GT1      <-----------GT1   <---------WOX13(1)     <---------AHL20(2)  >>>>>>>>>ARR2       <---------AHL20(2) --------->ATHB12 <----------DOF2                          --------->LBD16 --------DOF2<---------MYB52(1)     <----------DOF2        <------------------------ANAC81 ---------YAB1    <---------DAG2   <---------DAG2        <---------LBD16         <-----------GT1 ------------------>WRI1<---------YAB1         <-----------RAV1(1)         <----------DOF2   ctttgattgtttccctttagctttttatttttatctgccttttttttttttgttgttgttccggttctattcgtttccttttgttaccttgtttttggtt  16430900                 <---------ZAT14                 --------->ZAT14                 --------->At4g35610                                                  <---------GLK1(2)           ------>ZmHOX2a(1)                                                      <-------TEIL   <---       <---------ARR14(2)                                                <----------DOF2         <---       --------->ARR14(2)<---------ARR11(3)                              XXXXXXXXXXXXXXXXXXXX>MIR783  ------>ZmHOX2a(2)      --------->ARR11(3)       --------->SPL7       --------->At4g35610   --------  ================HOX2a_HOX2a        <---------GLK1(2)                 <---------At4g35610 ----------   ttgatctcaaatcctgctctgctctactatcttcaattcgattcttcatccgaacgaagaagacacaaattggagcttcactggtacatattcttgacgc  16431000                              <---------ATHB12 ------DAG2            <----------DOF2                                                   --------->ICU4 -------DOF2 --------------->AGL15                        --------->ATHB12               <---------YAB1 -->ID1      <---------------AGL15                       <-------TEIL            <---------TOE1(2)  < ->HVH21    <-----------------AGL2   ------->TEIL        <---------YAB1       --------->YAB1   <-----   tttatctctgatttgctatttagggcttttcaatgaatgaatttagtttttctgctatgttcattgggaagtaagttcaatcgtatgtgtgatgattttt  16431100             --------->DAG2         --------->YAB1 <---------LBD16                                         <-----------GT1        <---------YAB1 --------->MYB52(1)                ------->TEIL    ----------->GT1 ------ZmHOX2a(1)    ------->TEIL           <---------SPL7              <---------TOE2(3) ------GT1  ---------->DOF2       --------->ZAT6 >>>>>>>>>>>>>>>>>LFY   <---------TOE1(3)    ------>NtERF2   caggacgttgatgataaagcatgaatcacggagggaacactcaggccgtagcaccaatggaccctaattccattgaggtaattaacaatctcttgcgcct  16431200  Previous    Next  AGI:  At2g39340.1    Description:  SAC3/GANP family protein. similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G33680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41557.1); contains InterPro domain SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062) Range:  from: 16430717    to: 16437186    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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